MGE detailed information
MGE type: Genomic_island MGE length: 46793 bp
Accession: NZ_CP036245 Location: 4714599..4761391 Organism: Escherichia coli strain S65EC Replicon: chromosome
Accession: NZ_CP036245 Location: 4714599..4761391 Organism: Escherichia coli strain S65EC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S65EC_RS24335 () | 4711447..4712166 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| S65EC_RS24340 () | 4712163..4713794 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| S65EC_RS24345 () | 4713975..4714205 | + | 231 | WP_000371715.1 | (4Fe-4S)-binding protein | - |
| S65EC_RS24350 () | 4714217..4714489 | + | 273 | WP_000405645.1 | N-acetyltransferase | - |
| S65EC_RS24355 () | 4714599..4717136 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| S65EC_RS24360 () | 4717169..4717861 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| S65EC_RS24365 () | 4717926..4718450 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| S65EC_RS24370 () | 4718824..4722663 | + | 3840 | WP_001528154.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| S65EC_RS24375 () | 4723561..4724391 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| S65EC_RS24385 () | 4725547..4729476 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| S65EC_RS24390 () | 4729690..4729962 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| S65EC_RS24395 () | 4730190..4730486 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| S65EC_RS24400 () | 4730514..4730687 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| S65EC_RS24405 () | 4730806..4732323 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| S65EC_RS24410 () | 4732560..4734017 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| S65EC_RS24415 () | 4734076..4736223 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| S65EC_RS24420 () | 4736303..4737637 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| S65EC_RS24430 () | 4738003..4739541 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| S65EC_RS24435 () | 4740345..4741880 | - | 1536 | WP_000492897.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| S65EC_RS24440 () | 4741951..4742112 | - | 162 | Protein_4501 | DUF4942 domain-containing protein | - |
| S65EC_RS24445 () | 4742203..4743702 | + | 1500 | WP_029700729.1 | IS21 family transposase ISEc10 | Transposase |
| S65EC_RS24450 () | 4743699..4744454 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| S65EC_RS24455 () | 4744518..4745213 | - | 696 | Protein_4504 | DUF4942 domain-containing protein | - |
| S65EC_RS24460 () | 4745298..4745495 | - | 198 | WP_000839254.1 | DUF957 domain-containing protein | - |
| S65EC_RS24465 () | 4745507..4745995 | - | 489 | WP_000761714.1 | hypothetical protein | - |
| S65EC_RS24470 () | 4745992..4746369 | - | 378 | WP_001094436.1 | TA system toxin CbtA family protein | Toxin Detail |
| S65EC_RS24475 () | 4746416..4746793 | - | 378 | WP_015953067.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| S65EC_RS24480 () | 4746872..4747093 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| S65EC_RS24485 () | 4747162..4747638 | - | 477 | WP_001186756.1 | RadC family protein | - |
| S65EC_RS24490 () | 4747653..4748138 | - | 486 | WP_000860054.1 | antirestriction protein | - |
| S65EC_RS24495 () | 4748229..4749047 | - | 819 | WP_001175142.1 | DUF945 domain-containing protein | - |
| S65EC_RS24500 () | 4749137..4749370 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| S65EC_RS24505 () | 4749376..4750053 | - | 678 | WP_001097312.1 | hypothetical protein | - |
| S65EC_RS24510 () | 4750201..4750881 | - | 681 | WP_001282927.1 | WYL domain-containing protein | - |
| S65EC_RS24515 () | 4751084..4751968 | - | 885 | WP_000010416.1 | 50S ribosome-binding GTPase | - |
| S65EC_RS24520 () | 4752074..4753024 | + | 951 | WP_000157734.1 | hypothetical protein | - |
| S65EC_RS24525 () | 4753021..4753809 | - | 789 | WP_000816188.1 | hypothetical protein | - |
| S65EC_RS26940 () | 4755165..4755413 | - | 249 | WP_000573217.1 | hypothetical protein | - |
| S65EC_RS24535 () | 4755518..4756249 | + | 732 | WP_029700721.1 | inovirus Gp2 family protein | - |
| S65EC_RS24540 () | 4756577..4757455 | + | 879 | WP_000769117.1 | restriction endonuclease | - |
| S65EC_RS24545 () | 4757511..4758190 | - | 680 | Protein_4522 | transposase | - |
| S65EC_RS24550 () | 4758443..4758559 | + | 117 | Protein_4523 | phosphoporin PhoE | - |
| S65EC_RS24555 () | 4758561..4758694 | + | 134 | Protein_4524 | phosphate-starvation-inducible protein PsiE | - |
| S65EC_RS24560 () | 4758769..4760220 | - | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| S65EC_RS24565 () | 4760213..4761391 | - | 1179 | WP_001534804.1 | pyridoxal phosphate-dependent aminotransferase | - |
| S65EC_RS24570 () | 4761865..4763078 | + | 1214 | WP_162880626.1 | IS3 family transposase | - |
| S65EC_RS24575 () | 4763369..4763947 | + | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| S65EC_RS24580 () | 4763970..4764788 | + | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| S65EC_RS24585 () | 4764788..4765306 | + | 519 | WP_001217008.1 | hypothetical protein | - |
| S65EC_RS24595 () | 4765826..4766104 | + | 279 | WP_000502008.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|