MGE detailed information
MGE type: Conjugative plasmid MGE length: 93880 bp
Accession: NZ_CP036203 Location: 1..93880 Organism: Escherichia coli strain L725 Replicon: plasmid punnamed1
Accession: NZ_CP036203 Location: 1..93880 Organism: Escherichia coli strain L725 Replicon: plasmid punnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9K49_RS23640 () | 548..982 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| D9K49_RS23645 () | 1075..1341 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| D9K49_RS23650 () | 1406..2320 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| D9K49_RS23655 () | 2384..2566 | + | 183 | WP_000150323.1 | hypothetical protein | - |
| D9K49_RS23660 () | 2597..2848 | - | 252 | WP_000148280.1 | helix-turn-helix domain-containing protein | - |
| D9K49_RS25430 () | 2882..3079 | - | 198 | WP_001161109.1 | hypothetical protein | - |
| D9K49_RS23675 () | 3429..4277 | + | 849 | WP_130723484.1 | DUF4942 domain-containing protein | - |
| D9K49_RS23680 () | 4363..4698 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| D9K49_RS23685 () | 4932..5264 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| D9K49_RS23690 () | 5275..7977 | + | 2703 | WP_130723485.1 | Protein TraI | Relaxase |
| D9K49_RS23695 () | 8100..8918 | + | 819 | WP_001749195.1 | DUF2971 domain-containing protein | - |
| D9K49_RS23700 () | 8991..11282 | - | 2292 | WP_130723486.1 | conjugal transfer protein TrbC | - |
| D9K49_RS23705 () | 11275..12345 | - | 1071 | WP_124046954.1 | IncI1-type conjugal transfer protein TrbB | - |
| D9K49_RS23710 () | 12364..13572 | - | 1209 | WP_130723487.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 13752..13812 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13752..13812 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13752..13812 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13752..13812 | - | 61 | NuclAT_0 | - | Antitoxin Detail |
| D9K49_RS23715 () | 13864..14016 | + | 153 | WP_024179505.1 | Hok/Gef family protein | Toxin Detail |
| D9K49_RS23720 () | 14088..14339 | - | 252 | WP_024171163.1 | hypothetical protein | - |
| - () | 14733..14784 | - | 52 | NuclAT_1 | - | - |
| - () | 14733..14784 | - | 52 | NuclAT_1 | - | - |
| - () | 14733..14784 | - | 52 | NuclAT_1 | - | - |
| - () | 14733..14784 | - | 52 | NuclAT_1 | - | - |
| D9K49_RS25295 () | 15270..15446 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| D9K49_RS23730 () | 15629..15838 | - | 210 | WP_001140544.1 | hemolysin expression modulator Hha | - |
| D9K49_RS23735 () | 15934..16596 | - | 663 | WP_130723488.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| D9K49_RS23740 () | 16661..18829 | - | 2169 | WP_130723489.1 | DotA/TraY family protein | - |
| D9K49_RS23745 () | 18926..19510 | - | 585 | WP_130723490.1 | conjugal transfer protein TraX | - |
| D9K49_RS23750 () | 19539..20741 | - | 1203 | WP_021555368.1 | IncI1-type conjugal transfer protein TraW | - |
| D9K49_RS23755 () | 20708..21322 | - | 615 | WP_074577386.1 | IncI1-type conjugal transfer protein TraV | - |
| D9K49_RS23760 () | 21322..24366 | - | 3045 | WP_130723491.1 | IncI1-type conjugal transfer protein TraU | - |
| D9K49_RS23765 () | 24456..25256 | - | 801 | WP_130723492.1 | IncI1-type conjugal transfer protein TraT | - |
| D9K49_RS23770 () | 25240..25428 | - | 189 | WP_060527645.1 | putative conjugal transfer protein TraS | - |
| D9K49_RS23775 () | 25492..25896 | - | 405 | WP_130723493.1 | IncI1-type conjugal transfer protein TraR | - |
| D9K49_RS23780 () | 25947..26474 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| D9K49_RS23785 () | 26474..27178 | - | 705 | WP_130723494.1 | IncI1-type conjugal transfer protein TraP | - |
| D9K49_RS23790 () | 27178..28467 | - | 1290 | WP_074577393.1 | conjugal transfer protein TraO | - |
| D9K49_RS23795 () | 28470..29453 | - | 984 | WP_130723495.1 | hypothetical protein | VF |
| D9K49_RS23800 () | 29464..30156 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| D9K49_RS23805 () | 30153..30500 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| D9K49_RS23810 () | 30518..34285 | - | 3768 | WP_130723496.1 | DNA primase | - |
| D9K49_RS23815 () | 34375..34926 | - | 552 | WP_074577397.1 | Phospholipase D | VF |
| D9K49_RS23820 () | 34941..35231 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| D9K49_RS23825 () | 35228..36376 | - | 1149 | WP_074577398.1 | putative protein YggR | VF |
| D9K49_RS23830 () | 36373..37191 | - | 819 | WP_021555364.1 | hypothetical protein | VF |
| D9K49_RS23835 () | 37188..37646 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| D9K49_RS23840 () | 38041..38625 | - | 585 | WP_074577400.1 | histidine phosphatase family protein | - |
| D9K49_RS23845 () | 38685..39887 | - | 1203 | WP_000976350.1 | conjugal transfer protein TraF | - |
| D9K49_RS23850 () | 39973..40797 | - | 825 | WP_001238942.1 | hypothetical protein | - |
| D9K49_RS23860 () | 41039..41302 | + | 264 | Protein_42 | transposase | - |
| D9K49_RS23865 () | 41359..42651 | - | 1293 | WP_130723497.1 | hypothetical protein | VF |
| D9K49_RS23870 () | 42651..43307 | - | 657 | WP_130723498.1 | hypothetical protein | VF |
| D9K49_RS23875 () | 43292..43852 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| D9K49_RS23880 () | 43862..44476 | - | 615 | WP_130723499.1 | hypothetical protein | VF |
| D9K49_RS23885 () | 44493..45578 | - | 1086 | WP_130723500.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| D9K49_RS23890 () | 45591..47144 | - | 1554 | WP_130723501.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| D9K49_RS23895 () | 47155..47607 | - | 453 | WP_130723502.1 | hypothetical protein | VF |
| D9K49_RS23900 () | 47594..48889 | - | 1296 | WP_001545757.1 | type 4b pilus protein PilO2 | - |
| D9K49_RS23905 () | 48882..50564 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| D9K49_RS23910 () | 50578..51015 | - | 438 | WP_130723503.1 | hypothetical protein | VF |
| D9K49_RS23915 () | 51015..52082 | - | 1068 | WP_054170954.1 | hypothetical protein | VF |
| D9K49_RS23930 () | 53054..53320 | - | 267 | WP_089583658.1 | hypothetical protein | - |
| D9K49_RS23940 () | 53564..53818 | - | 255 | WP_041031712.1 | PilI type IV pilus biogenesis protein | - |
| D9K49_RS23950 () | 53990..54673 | - | 684 | WP_000213861.1 | hypothetical protein | - |
| D9K49_RS23955 () | 54926..55459 | - | 534 | WP_121308288.1 | transcription termination factor NusG | - |
| D9K49_RS23965 () | 55901..56188 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| D9K49_RS23970 () | 56106..56369 | - | 264 | WP_001387472.1 | ash family protein | - |
| D9K49_RS23985 () | 57341..58372 | + | 1032 | WP_074576900.1 | replication initiation protein | - |
| D9K49_RS24005 () | 59282..60274 | + | 993 | WP_001420353.1 | hypothetical protein | - |
| D9K49_RS24010 () | 60333..60950 | - | 618 | WP_089624214.1 | proQ/FINO family protein | - |
| D9K49_RS24015 () | 61145..62701 | - | 1557 | WP_000818361.1 | AAA family ATPase | - |
| D9K49_RS24020 () | 62966..63556 | - | 591 | WP_001460360.1 | hypothetical protein | - |
| D9K49_RS24025 () | 63556..63813 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| D9K49_RS24030 () | 64142..65245 | + | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| D9K49_RS24040 () | 65489..66186 | - | 698 | Protein_67 | IS1 family transposase | - |
| D9K49_RS24045 () | 66242..66427 | - | 186 | Protein_68 | phosphodiesterase MrkJ | - |
| D9K49_RS24050 () | 66663..67031 | - | 369 | WP_032677090.1 | hypothetical protein | - |
| D9K49_RS24055 () | 67178..67309 | - | 132 | Protein_70 | IS1 family transposase | - |
| D9K49_RS24060 () | 67708..68405 | - | 698 | Protein_71 | IS1 family transposase | - |
| D9K49_RS24065 () | 68515..70512 | + | 1998 | WP_008502232.1 | choline BCCT transporter BetT | - |
| D9K49_RS24070 () | 70529..71821 | + | 1293 | WP_023304011.1 | DUF2254 domain-containing protein | - |
| D9K49_RS24075 () | 71862..72842 | + | 981 | WP_000019445.1 | IS5 family transposase ISKpn26 | Transposase |
| D9K49_RS24085 () | 73232..74206 | + | 975 | WP_069602500.1 | sensor domain-containing diguanylate cyclase | - |
| D9K49_RS24090 () | 74776..75126 | + | 351 | WP_000493379.1 | hypothetical protein | - |
| D9K49_RS24095 () | 75185..76006 | + | 822 | WP_001316850.1 | hypothetical protein | - |
| D9K49_RS24100 () | 76006..76785 | + | 780 | WP_000147281.1 | site-specific integrase | - |
| D9K49_RS24105 () | 76965..77609 | + | 645 | WP_001144036.1 | ParA family protein | - |
| D9K49_RS24110 () | 77696..78004 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| D9K49_RS24115 () | 78418..79398 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| D9K49_RS24120 () | 79391..79807 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| D9K49_RS24125 () | 79809..81083 | - | 1275 | WP_023196150.1 | Y-family DNA polymerase | - |
| D9K49_RS24130 () | 81083..81520 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| D9K49_RS24135 () | 81517..81765 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| D9K49_RS24145 () | 82183..83085 | + | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| D9K49_RS24150 () | 83082..83393 | + | 312 | WP_032317461.1 | hypothetical protein | - |
| D9K49_RS24155 () | 83470..84153 | + | 684 | WP_130723507.1 | DNA methylase | - |
| D9K49_RS24160 () | 84154..84375 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| D9K49_RS24165 () | 84389..84823 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| D9K49_RS25435 () | 84868..85638 | + | 771 | WP_205694908.1 | hypothetical protein | - |
| D9K49_RS24180 () | 86172..86474 | + | 303 | WP_075207376.1 | antirestriction protein | - |
| D9K49_RS24185 () | 86521..86943 | + | 423 | WP_061671614.1 | DUF1380 family protein | - |
| D9K49_RS24190 () | 86940..87131 | + | 192 | WP_001697954.1 | hypothetical protein | - |
| D9K49_RS24200 () | 87202..87516 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| D9K49_RS24210 () | 87900..88427 | + | 528 | WP_053264372.1 | single-stranded DNA-binding protein | - |
| D9K49_RS24215 () | 88484..88717 | + | 234 | WP_024261882.1 | DUF905 domain-containing protein | - |
| D9K49_RS24220 () | 88779..90737 | + | 1959 | WP_130723508.1 | ParB/RepB/Spo0J family partition protein | - |
| D9K49_RS24225 () | 90792..91226 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| D9K49_RS24230 () | 91223..91942 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| D9K49_RS24235 () | 92072..92548 | + | 477 | Protein_101 | IS200-IS605 family transposase ISEc46 | Transposase |
| D9K49_RS24250 () | 93074..93574 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|