MGE detailed information
MGE type: Prophage MGE length: 48857 bp
Accession: NZ_CP035884 Location: 4778912..4827768 Organism: Escherichia coli strain LSN03-016011/A Replicon: chromosome
Accession: NZ_CP035884 Location: 4778912..4827768 Organism: Escherichia coli strain LSN03-016011/A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW995_RS22995 (4774901) | 4774901..4774948 | + | 48 | WP_211180494.1 | protein YnaN | - |
| EW995_RS23000 (4774962) | 4774962..4775945 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| EW995_RS23005 (4776423) | 4776423..4777796 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| EW995_RS23010 (4777925) | 4777925..4778860 | - | 936 | WP_001157405.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EW995_RS23015 (4778912) | 4778912..4780147 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EW995_RS23020 (4780149) | 4780149..4780364 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (4780468) | 4780468..4780646 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (4780468) | 4780468..4780646 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (4780468) | 4780468..4780646 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (4780468) | 4780468..4780646 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| EW995_RS23025 (4780443) | 4780443..4780652 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| EW995_RS23030 (4780690) | 4780690..4780839 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| EW995_RS23035 (4780896) | 4780896..4781705 | - | 810 | WP_134737085.1 | recombination protein RecT | - |
| EW995_RS23040 (4781698) | 4781698..4784298 | - | 2601 | WP_001702664.1 | exodeoxyribonuclease VIII | - |
| EW995_RS23045 (4784400) | 4784400..4784675 | - | 276 | WP_001314664.1 | hypothetical protein | - |
| EW995_RS23050 (4784750) | 4784750..4784920 | - | 171 | WP_134737086.1 | YdaE family protein | - |
| EW995_RS23055 (4784920) | 4784920..4785141 | - | 222 | WP_000560230.1 | killing protein KilR | - |
| EW995_RS23060 (4785550) | 4785550..4785702 | - | 153 | WP_001169150.1 | DUF1391 family protein | - |
| EW995_RS23065 (4786138) | 4786138..4786557 | - | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| EW995_RS23070 (4786637) | 4786637..4786891 | + | 255 | WP_001072343.1 | hypothetical protein | - |
| EW995_RS23075 (4786888) | 4786888..4787310 | + | 423 | WP_000693802.1 | toxin YdaT family protein | - |
| EW995_RS23080 (4787323) | 4787323..4788180 | + | 858 | WP_000899746.1 | YdaU family protein | - |
| EW995_RS23085 (4788187) | 4788187..4788933 | + | 747 | WP_000788968.1 | ATP-binding protein | - |
| EW995_RS23090 (4788956) | 4788956..4789717 | + | 762 | WP_000450674.1 | DUF1627 domain-containing protein | - |
| EW995_RS23095 (4789733) | 4789733..4790149 | + | 417 | WP_001151122.1 | DUF977 family protein | - |
| EW995_RS23100 (4790469) | 4790469..4790870 | + | 402 | WP_134737087.1 | hypothetical protein | - |
| EW995_RS23105 (4790949) | 4790949..4792364 | + | 1416 | WP_073841078.1 | hypothetical protein | - |
| EW995_RS23110 (4792954) | 4792954..4793292 | - | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| EW995_RS23115 (4794106) | 4794106..4794705 | + | 600 | WP_134737088.1 | DUF1367 family protein | - |
| EW995_RS23120 (4794705) | 4794705..4794995 | + | 291 | WP_000228023.1 | DUF1364 domain-containing protein | - |
| EW995_RS23125 (4794992) | 4794992..4795534 | + | 543 | WP_053000474.1 | DUF1133 family protein | - |
| EW995_RS25260 (4796747) | 4796747..4797007 | + | 261 | Protein_4512 | cell envelope integrity protein TolA | - |
| EW995_RS23135 (4797179) | 4797179..4797553 | + | 375 | WP_134737092.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| EW995_RS23140 (4797805) | 4797805..4798020 | + | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| EW995_RS23145 (4798020) | 4798020..4798517 | + | 498 | WP_001135310.1 | lysozyme RrrD | - |
| EW995_RS23150 (4798734) | 4798734..4798919 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| EW995_RS23155 (4799116) | 4799116..4800573 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| EW995_RS25265 (4800711) | 4800711..4800968 | + | 258 | Protein_4518 | ParB/Srx family N-terminal domain-containing protein | - |
| EW995_RS23165 (4801495) | 4801495..4802427 | + | 933 | Protein_4519 | hypothetical protein | - |
| EW995_RS23170 (4802405) | 4802405..4802614 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| EW995_RS23175 (4802618) | 4802618..4803712 | + | 1095 | WP_000089437.1 | terminase small subunit | - |
| EW995_RS23180 (4803693) | 4803693..4804994 | + | 1302 | WP_134737089.1 | terminase family protein | - |
| EW995_RS23185 (4804997) | 4804997..4806403 | + | 1407 | WP_000763706.1 | DUF4055 domain-containing protein | - |
| EW995_RS23190 (4806387) | 4806387..4807499 | + | 1113 | WP_024181861.1 | phage minor head protein | - |
| EW995_RS23195 (4807604) | 4807604..4808368 | + | 765 | WP_021552291.1 | hypothetical protein | - |
| EW995_RS23200 (4808467) | 4808467..4809606 | + | 1140 | WP_000918483.1 | P22 phage major capsid protein family protein | - |
| EW995_RS23205 (4809649) | 4809649..4809825 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| EW995_RS23210 (4809829) | 4809829..4810224 | + | 396 | WP_021552292.1 | hypothetical protein | - |
| EW995_RS23215 (4810224) | 4810224..4810607 | + | 384 | WP_000524259.1 | hypothetical protein | - |
| EW995_RS23220 (4810608) | 4810608..4810988 | + | 381 | WP_033865388.1 | hypothetical protein | - |
| EW995_RS23225 (4810985) | 4810985..4811377 | + | 393 | WP_000144678.1 | phage tail terminator-like protein | - |
| EW995_RS23230 (4811404) | 4811404..4812366 | + | 963 | WP_000094292.1 | phage tail tube protein | - |
| EW995_RS23235 (4812517) | 4812517..4812876 | + | 360 | WP_012565075.1 | protein YdaY | - |
| EW995_RS23240 (4813350) | 4813350..4816583 | + | 3234 | WP_033866456.1 | phage tail tape measure protein | - |
| EW995_RS23245 (4816576) | 4816576..4816914 | + | 339 | WP_000024051.1 | phage tail protein | - |
| EW995_RS23250 (4816914) | 4816914..4817612 | + | 699 | WP_016232668.1 | phage minor tail protein L | - |
| EW995_RS23255 (4817617) | 4817617..4818360 | + | 744 | WP_077580620.1 | C40 family peptidase | - |
| EW995_RS23260 (4818258) | 4818258..4818905 | + | 648 | WP_021514630.1 | tail assembly protein | - |
| EW995_RS23265 (4818966) | 4818966..4822463 | + | 3498 | WP_096852040.1 | host specificity protein J | - |
| EW995_RS23270 (4822534) | 4822534..4823133 | + | 600 | WP_134737275.1 | Outer membrane protein X | VF |
| EW995_RS23275 (4823330) | 4823330..4823788 | + | 459 | WP_000526113.1 | IS200-IS605 family transposase IS200C | Transposase |
| EW995_RS23280 (4823909) | 4823909..4827184 | + | 3276 | WP_216349486.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EW995_RS23285 (4827184) | 4827184..4827768 | + | 585 | WP_021558792.1 | tail fiber assembly protein | - |
| EW995_RS23290 (4828002) | 4828002..4828838 | - | 837 | WP_080029814.1 | iron/manganese ABC transporter permease subunit SitD | - |
| EW995_RS23295 (4828835) | 4828835..4829692 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| EW995_RS23300 (4829689) | 4829689..4830516 | - | 828 | WP_000983721.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| EW995_RS23305 (4830516) | 4830516..4831430 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| EW995_RS23310 (4832015) | 4832015..4832449 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|