MGE detailed information
MGE type: Prophage MGE length: 54480 bp
Accession: NZ_CP035884 Location: 18040..72519 Organism: Escherichia coli strain LSN03-016011/A Replicon: chromosome
Accession: NZ_CP035884 Location: 18040..72519 Organism: Escherichia coli strain LSN03-016011/A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW995_RS00090 (14553) | 14553..15299 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EW995_RS00095 (15388) | 15388..16074 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| EW995_RS00100 (16252) | 16252..16455 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EW995_RS00105 (16491) | 16491..17951 | - | 1461 | WP_134737138.1 | mannitol dehydrogenase family protein | - |
| EW995_RS00110 (18040) | 18040..19323 | - | 1284 | Protein_21 | MHS family MFS transporter YdfJ | - |
| EW995_RS00115 (19927) | 19927..20040 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| EW995_RS00120 (20109) | 20109..20342 | + | 234 | WP_134737139.1 | cold shock protein YdfK | - |
| EW995_RS00125 (20660) | 20660..21250 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EW995_RS00130 (21348) | 21348..21923 | - | 576 | WP_000885584.1 | tail fiber assembly protein | - |
| EW995_RS00135 (21923) | 21923..24886 | - | 2964 | WP_087650878.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EW995_RS00140 (24951) | 24951..25550 | - | 600 | WP_001230379.1 | Outer membrane protein X | VF |
| EW995_RS00145 (25620) | 25620..29033 | - | 3414 | WP_216349490.1 | host specificity protein J | - |
| EW995_RS00150 (29094) | 29094..29665 | - | 572 | Protein_29 | tail assembly protein | - |
| EW995_RS00155 (29662) | 29662..30405 | - | 744 | WP_000194780.1 | C40 family peptidase | - |
| EW995_RS00160 (30411) | 30411..31109 | - | 699 | WP_001152624.1 | phage minor tail protein L | - |
| EW995_RS00165 (31109) | 31109..31438 | - | 330 | WP_000847331.1 | phage tail protein | - |
| EW995_RS00170 (31435) | 31435..34014 | - | 2580 | WP_000840337.1 | phage tail tape measure protein | - |
| EW995_RS00175 (34007) | 34007..34441 | - | 435 | WP_000459471.1 | phage tail assembly protein T | - |
| EW995_RS00180 (34423) | 34423..34845 | - | 423 | WP_000479135.1 | phage minor tail protein G | - |
| EW995_RS00185 (34861) | 34861..35580 | - | 720 | WP_001144350.1 | phage tail protein | - |
| EW995_RS00190 (35649) | 35649..36326 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EW995_RS00195 (36326) | 36326..36673 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EW995_RS00200 (36693) | 36693..38264 | + | 1572 | WP_000381387.1 | IS66 family transposase ISCro1 | Transposase |
| EW995_RS00205 (38316) | 38316..38711 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| EW995_RS00210 (38708) | 38708..39286 | - | 579 | WP_032298608.1 | phage tail protein | - |
| EW995_RS00215 (39298) | 39298..39651 | - | 354 | WP_134737193.1 | head-tail joining protein | - |
| EW995_RS00220 (39663) | 39663..40058 | - | 396 | WP_077790342.1 | DNA-packaging protein FI | - |
| EW995_RS00225 (40100) | 40100..41125 | - | 1026 | WP_000063273.1 | major capsid protein | - |
| EW995_RS00230 (41181) | 41181..41513 | - | 333 | WP_001338090.1 | head decoration protein | - |
| EW995_RS00235 (41523) | 41523..42842 | - | 1320 | WP_000123225.1 | S49 family peptidase | - |
| EW995_RS00240 (42823) | 42823..44424 | - | 1602 | WP_094316637.1 | phage portal protein | - |
| EW995_RS00245 (44421) | 44421..44627 | - | 207 | WP_000198149.1 | gpW family protein | - |
| EW995_RS00250 (44624) | 44624..46549 | - | 1926 | WP_134741892.1 | phage terminase large subunit family protein | - |
| EW995_RS00255 (46524) | 46524..47069 | - | 546 | WP_000453571.1 | DNA-packaging protein | - |
| EW995_RS00260 (47458) | 47458..47691 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EW995_RS00265 (47749) | 47749..48159 | + | 411 | WP_134737195.1 | DUF1398 domain-containing protein | - |
| EW995_RS00270 (48311) | 48311..48484 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EW995_RS00275 (48656) | 48656..48811 | - | 156 | WP_001309517.1 | protein YnfN | - |
| EW995_RS00280 (48891) | 48891..48956 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| EW995_RS00285 (48959) | 48959..49147 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EW995_RS00290 (49158) | 49158..49370 | - | 213 | WP_000072434.1 | cold shock protein CspI | - |
| EW995_RS00295 (49733) | 49733..50230 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EW995_RS00300 (50227) | 50227..50760 | - | 534 | WP_001092971.1 | lysozyme | - |
| EW995_RS00305 (50757) | 50757..51068 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EW995_RS00310 (51073) | 51073..51288 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EW995_RS00315 (51507) | 51507..51677 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EW995_RS00320 (52041) | 52041..52256 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EW995_RS00325 (52557) | 52557..52769 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EW995_RS00330 (52824) | 52824..52913 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EW995_RS00335 (53191) | 53191..53943 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EW995_RS00340 (53957) | 53957..55006 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EW995_RS00345 (55008) | 55008..55286 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EW995_RS00350 (55353) | 55353..55604 | - | 252 | WP_000980994.1 | protein Rem | - |
| EW995_RS00355 (55821) | 55821..55976 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EW995_RS00360 (56048) | 56048..56335 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EW995_RS00365 (56335) | 56335..56574 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EW995_RS00370 (56599) | 56599..56904 | + | 306 | WP_001326990.1 | protein YdfV | - |
| EW995_RS00375 (57107) | 57107..57439 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| EW995_RS25120 (57876) | 57876..58025 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| EW995_RS00380 (58146) | 58146..59168 | - | 1023 | Protein_76 | ISNCY family transposase ISCARN112 | Transposase |
| EW995_RS00385 (59958) | 59958..60245 | - | 288 | Protein_77 | hypothetical protein | - |
| EW995_RS00390 (60723) | 60723..61212 | - | 490 | Protein_78 | class I SAM-dependent methyltransferase | - |
| EW995_RS00395 (61209) | 61209..61631 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| EW995_RS00400 (61672) | 61672..62637 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| EW995_RS00405 (62618) | 62618..63139 | - | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| EW995_RS00410 (63123) | 63123..63353 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| EW995_RS00415 (63437) | 63437..63844 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EW995_RS00420 (64011) | 64011..64166 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EW995_RS00425 (64326) | 64326..64544 | + | 219 | WP_001171942.1 | protein YdfC | - |
| EW995_RS00430 (65112) | 65112..65300 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EW995_RS00435 (65297) | 65297..65488 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EW995_RS00440 (65581) | 65581..68052 | + | 2472 | WP_000048341.1 | exonuclease | - |
| EW995_RS00445 (68125) | 68125..68376 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| EW995_RS00450 (68411) | 68411..69691 | + | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EW995_RS00455 (69934) | 69934..71505 | - | 1572 | WP_216349491.1 | IS66 family transposase ISCro1 | Transposase |
| EW995_RS00460 (71525) | 71525..71872 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EW995_RS00465 (71872) | 71872..72549 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EW995_RS00470 (72586) | 72586..73605 | - | 1020 | WP_134736968.1 | Zn-dependent oxidoreductase | - |
| EW995_RS00475 (73617) | 73617..74831 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EW995_RS00480 (75037) | 75037..75363 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| EW995_RS00485 (75498) | 75498..75839 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EW995_RS00490 (75874) | 75874..76434 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EW995_RS00495 (76437) | 76437..77147 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|