MGE detailed information
MGE type: Prophage MGE length: 66761 bp
Accession: NZ_CP035882 Location: 1642139..1708899 Organism: Escherichia coli strain WS0115A Replicon: chromosome
Accession: NZ_CP035882 Location: 1642139..1708899 Organism: Escherichia coli strain WS0115A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW996_RS07830 (1638388) | 1638388..1640814 | - | 2427 | WP_000041681.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| EW996_RS07835 (1641013) | 1641013..1641318 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EW996_RS07840 (1641426) | 1641426..1642136 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EW996_RS07845 (1642139) | 1642139..1642699 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EW996_RS07850 (1642734) | 1642734..1643075 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EW996_RS07855 (1643211) | 1643211..1643537 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EW996_RS07860 (1643743) | 1643743..1644957 | + | 1215 | WP_074502037.1 | starvation-sensing protein RspA | - |
| EW996_RS07865 (1644969) | 1644969..1645988 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EW996_RS07870 (1646176) | 1646176..1647456 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EW996_RS07875 (1647512) | 1647512..1648189 | + | 678 | WP_074507812.1 | IS66 family transposase ISCro1 | Transposase |
| EW996_RS07880 (1648189) | 1648189..1648536 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EW996_RS07885 (1648556) | 1648556..1650127 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| EW996_RS07890 (1650198) | 1650198..1650449 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EW996_RS07895 (1650522) | 1650522..1652993 | - | 2472 | WP_000048342.1 | exonuclease | - |
| EW996_RS07900 (1653086) | 1653086..1653277 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EW996_RS07905 (1653274) | 1653274..1653462 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EW996_RS07910 (1654030) | 1654030..1654248 | - | 219 | WP_001171942.1 | protein YdfC | - |
| EW996_RS07915 (1654408) | 1654408..1654563 | - | 156 | WP_216316036.1 | DUF1391 family protein | - |
| EW996_RS07920 (1654730) | 1654730..1655137 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EW996_RS07925 (1655221) | 1655221..1655451 | + | 231 | WP_216316037.1 | dicB transcriptional regulator DicC | - |
| EW996_RS07930 (1655435) | 1655435..1655956 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| EW996_RS07935 (1655937) | 1655937..1656902 | + | 966 | WP_216316038.1 | hypothetical protein | - |
| EW996_RS07940 (1656943) | 1656943..1657365 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| EW996_RS07945 (1657362) | 1657362..1657851 | + | 490 | Protein_1553 | class I SAM-dependent methyltransferase | - |
| EW996_RS07950 (1658329) | 1658329..1658750 | + | 422 | Protein_1554 | hypothetical protein | - |
| EW996_RS07955 (1659406) | 1659406..1660428 | + | 1023 | Protein_1555 | ISNCY family transposase ISCARN112 | Transposase |
| EW996_RS24510 (1660549) | 1660549..1660698 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| EW996_RS07960 (1661135) | 1661135..1661467 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| EW996_RS07965 (1661670) | 1661670..1661975 | - | 306 | WP_001326990.1 | protein YdfV | - |
| EW996_RS07970 (1662000) | 1662000..1662239 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EW996_RS07975 (1662239) | 1662239..1662526 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EW996_RS07980 (1662598) | 1662598..1662753 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EW996_RS07985 (1662970) | 1662970..1663221 | + | 252 | WP_000980994.1 | protein Rem | - |
| EW996_RS07990 (1663288) | 1663288..1663566 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EW996_RS07995 (1663568) | 1663568..1664617 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EW996_RS08000 (1664631) | 1664631..1665383 | + | 753 | WP_001047135.1 | antitermination protein | - |
| EW996_RS08005 (1665661) | 1665661..1665750 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EW996_RS08010 (1665805) | 1665805..1666017 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EW996_RS08015 (1666318) | 1666318..1666533 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EW996_RS08020 (1666897) | 1666897..1667067 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EW996_RS08025 (1667287) | 1667287..1667502 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EW996_RS08030 (1667507) | 1667507..1667818 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| EW996_RS08035 (1667815) | 1667815..1668348 | + | 534 | WP_001092971.1 | lysozyme | - |
| EW996_RS08040 (1668345) | 1668345..1668842 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EW996_RS08045 (1669205) | 1669205..1669417 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EW996_RS08050 (1669428) | 1669428..1669616 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EW996_RS08055 (1669619) | 1669619..1669684 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| EW996_RS08060 (1669764) | 1669764..1669919 | + | 156 | WP_001309517.1 | protein YnfN | - |
| EW996_RS08065 (1670091) | 1670091..1670263 | + | 173 | Protein_1578 | addiction module toxin, GnsA/GnsB family | - |
| EW996_RS08070 (1670415) | 1670415..1670825 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EW996_RS08075 (1670883) | 1670883..1671116 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EW996_RS08080 (1671505) | 1671505..1672050 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| EW996_RS08085 (1672025) | 1672025..1673950 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| EW996_RS08090 (1673947) | 1673947..1674153 | + | 207 | WP_000198149.1 | gpW family protein | - |
| EW996_RS08095 (1674150) | 1674150..1675751 | + | 1602 | WP_001358597.1 | phage portal protein | - |
| EW996_RS08100 (1675732) | 1675732..1676436 | + | 705 | Protein_1585 | S49 family peptidase | - |
| EW996_RS08105 (1676505) | 1676505..1677682 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| EW996_RS08110 (1677689) | 1677689..1678324 | + | 636 | Protein_1587 | S49 family peptidase | - |
| EW996_RS08115 (1678334) | 1678334..1678666 | + | 333 | WP_216316039.1 | head decoration protein | - |
| EW996_RS08120 (1678722) | 1678722..1679747 | + | 1026 | WP_000118191.1 | major capsid protein | - |
| EW996_RS08125 (1679789) | 1679789..1680184 | + | 396 | WP_000158899.1 | DNA-packaging protein FI | - |
| EW996_RS08130 (1680196) | 1680196..1680549 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| EW996_RS08135 (1680561) | 1680561..1681139 | + | 579 | WP_000975081.1 | phage tail protein | - |
| EW996_RS08140 (1681136) | 1681136..1681531 | + | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| EW996_RS08145 (1681539) | 1681539..1682279 | + | 741 | WP_021514938.1 | phage tail protein | - |
| EW996_RS08150 (1682295) | 1682295..1682717 | + | 423 | WP_001595434.1 | phage minor tail protein G | - |
| EW996_RS08155 (1682699) | 1682699..1683133 | + | 435 | WP_044790016.1 | phage tail assembly protein T | - |
| EW996_RS08160 (1683126) | 1683126..1685705 | + | 2580 | WP_044790012.1 | phage tail tape measure protein | - |
| EW996_RS08165 (1685702) | 1685702..1686031 | + | 330 | WP_000847352.1 | phage tail protein | - |
| EW996_RS08170 (1686031) | 1686031..1686729 | + | 699 | WP_001152612.1 | phage minor tail protein L | - |
| EW996_RS08175 (1686734) | 1686734..1687477 | + | 744 | WP_216316040.1 | C40 family peptidase | - |
| EW996_RS08180 (1687474) | 1687474..1688022 | + | 549 | WP_251004422.1 | tail assembly protein | - |
| EW996_RS08185 (1688082) | 1688082..1691480 | + | 3399 | WP_216316041.1 | host specificity protein J | - |
| EW996_RS08190 (1691547) | 1691547..1692146 | + | 600 | WP_191528487.1 | Outer membrane protein X | VF |
| EW996_RS08195 (1692211) | 1692211..1693248 | + | 1038 | Protein_1604 | prophage tail fiber N-terminal domain-containing protein | - |
| EW996_RS08200 (1693359) | 1693359..1694036 | + | 678 | WP_074507812.1 | IS66 family transposase ISCro1 | Transposase |
| EW996_RS08205 (1694036) | 1694036..1694383 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EW996_RS08210 (1694403) | 1694403..1695974 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| EW996_RS24515 (1696070) | 1696070..1698520 | + | 2451 | WP_249531184.1 | tail fiber domain-containing protein | - |
| EW996_RS08225 (1698572) | 1698572..1698694 | + | 123 | Protein_1609 | tail fiber assembly protein | - |
| EW996_RS08230 (1698792) | 1698792..1699382 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EW996_RS08235 (1699699) | 1699699..1699932 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EW996_RS08240 (1700001) | 1700001..1700114 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| EW996_RS08245 (1700718) | 1700718..1702001 | + | 1284 | Protein_1613 | MHS family MFS transporter YdfJ | - |
| EW996_RS08250 (1702090) | 1702090..1703550 | + | 1461 | WP_074502536.1 | mannitol dehydrogenase family protein | - |
| EW996_RS08255 (1703586) | 1703586..1703789 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EW996_RS08260 (1703966) | 1703966..1704652 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| EW996_RS08265 (1704741) | 1704741..1705487 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| EW996_RS08270 (1705624) | 1705624..1707669 | + | 2046 | WP_001515364.1 | peptidyl-dipeptidase Dcp | - |
| EW996_RS08275 (1707713) | 1707713..1708231 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| EW996_RS08280 (1708507) | 1708507..1708899 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| EW996_RS08285 (1709154) | 1709154..1710044 | + | 891 | WP_000592826.1 | diguanylate cyclase DgcZ | - |
| EW996_RS08290 (1710159) | 1710159..1710263 | - | 105 | WP_211180496.1 | protein MgtT | - |
| EW996_RS08295 (1710263) | 1710263..1710358 | - | 96 | WP_000901367.1 | protein MgtS | - |
| EW996_RS08300 (1710485) | 1710485..1711672 | - | 1188 | WP_074502541.1 | efflux MFS transporter YdeE | - |
| EW996_RS08305 (1711867) | 1711867..1712766 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| EW996_RS08310 (1712811) | 1712811..1713509 | - | 699 | WP_000577191.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|