MGE detailed information
MGE type: Conjugative plasmid MGE length: 81772 bp
Accession: NZ_CP035881 Location: 1..81772 Organism: Escherichia coli strain DS26-1 Replicon: plasmid pDS26_81
Accession: NZ_CP035881 Location: 1..81772 Organism: Escherichia coli strain DS26-1 Replicon: plasmid pDS26_81
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW997_RS25680 (1154) | 1154..1768 | - | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| EW997_RS25685 (1894) | 1894..4779 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| EW997_RS25690 (4813) | 4813..5364 | - | 552 | Protein_3 | IS91 family transposase IS91 | Transposase |
| EW997_RS25695 (5364) | 5364..5729 | - | 366 | WP_000124103.1 | hypothetical protein | - |
| EW997_RS25700 (6257) | 6257..6766 | + | 510 | WP_000115002.1 | peptide deformylase | - |
| EW997_RS25705 (6910) | 6910..8082 | + | 1173 | WP_074508047.1 | IS21 family transposase IS21 | Transposase |
| EW997_RS25710 (8082) | 8082..8879 | + | 798 | WP_123001400.1 | IS21 family transposase IS21 | Transposase |
| EW997_RS26495 (8925) | 8925..9017 | + | 93 | Protein_8 | hypothetical protein | - |
| EW997_RS25715 (9214) | 9214..9405 | + | 192 | WP_000175572.1 | DUF2164 family protein | - |
| EW997_RS25720 (9402) | 9402..9764 | + | 363 | WP_000181069.1 | hypothetical protein | - |
| EW997_RS25725 (10097) | 10097..10624 | - | 528 | WP_001196880.1 | DoxX family protein | - |
| EW997_RS25730 (10626) | 10626..11384 | - | 759 | WP_001181584.1 | DNA-binding domain-containing protein | - |
| EW997_RS25735 (11353) | 11353..12279 | - | 927 | WP_000989040.1 | DUF692 domain-containing protein | - |
| EW997_RS25740 (12311) | 12311..12601 | - | 291 | WP_000754125.1 | DUF2282 domain-containing protein | - |
| EW997_RS25745 (12910) | 12910..13467 | - | 558 | WP_000103553.1 | hypothetical protein | VF |
| EW997_RS25750 (14115) | 14115..14681 | + | 567 | WP_000587874.1 | hypothetical protein | - |
| EW997_RS25755 (14749) | 14749..14856 | - | 108 | WP_157732294.1 | transposase domain-containing protein | - |
| EW997_RS25760 (15070) | 15070..16050 | + | 981 | WP_001218105.1 | plasmid segregation protein ParM | - |
| EW997_RS25765 (16053) | 16053..16475 | + | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| EW997_RS26500 (16479) | 16479..16790 | + | 312 | WP_244578347.1 | hypothetical protein | - |
| EW997_RS25770 (16885) | 16885..17787 | + | 903 | WP_001301402.1 | DUF1281 domain-containing protein | - |
| EW997_RS25775 (17784) | 17784..18095 | + | 312 | WP_032142385.1 | hypothetical protein | - |
| EW997_RS25780 (18171) | 18171..18854 | + | 684 | WP_000086128.1 | DNA methylase | - |
| EW997_RS25785 (18855) | 18855..19076 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| EW997_RS25790 (18970) | 18970..19524 | + | 555 | WP_077627405.1 | DUF1380 family protein | - |
| EW997_RS25795 (19569) | 19569..20339 | + | 771 | WP_001006249.1 | hypothetical protein | - |
| EW997_RS25800 (20754) | 20754..21179 | + | 426 | WP_001198877.1 | antirestriction protein | - |
| EW997_RS25805 (21226) | 21226..21648 | + | 423 | WP_000271739.1 | DUF1380 family protein | - |
| EW997_RS25810 (21645) | 21645..21836 | + | 192 | WP_001024838.1 | hypothetical protein | - |
| EW997_RS25815 (22108) | 22108..22356 | - | 249 | WP_071998823.1 | hypothetical protein | - |
| EW997_RS25820 (22873) | 22873..23103 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| EW997_RS25825 (23155) | 23155..24516 | + | 1362 | WP_074573944.1 | DUF3560 domain-containing protein | - |
| EW997_RS25830 (24563) | 24563..25126 | + | 564 | WP_001297832.1 | class I SAM-dependent methyltransferase | - |
| EW997_RS26505 (25126) | 25126..25344 | + | 219 | WP_244578346.1 | hypothetical protein | - |
| EW997_RS26510 (25278) | 25278..25514 | + | 237 | WP_071777099.1 | hypothetical protein | - |
| EW997_RS25840 (25987) | 25987..26514 | + | 528 | WP_059334604.1 | single-stranded DNA-binding protein | - |
| EW997_RS25845 (26571) | 26571..26804 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| EW997_RS25850 (26868) | 26868..28832 | + | 1965 | WP_097306981.1 | ParB/RepB/Spo0J family partition protein | - |
| EW997_RS25855 (28887) | 28887..29321 | + | 435 | WP_000845950.1 | conjugation system SOS inhibitor PsiB | - |
| EW997_RS25860 (29318) | 29318..30037 | + | 720 | WP_000994093.1 | plasmid SOS inhibition protein A | - |
| EW997_RS25865 (30034) | 30034..30348 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - (30305) | 30305..30505 | + | 201 | NuclAT_0 | - | - |
| - (30305) | 30305..30505 | + | 201 | NuclAT_0 | - | - |
| - (30305) | 30305..30505 | + | 201 | NuclAT_0 | - | - |
| - (30305) | 30305..30505 | + | 201 | NuclAT_0 | - | - |
| - (30305) | 30305..30505 | - | 201 | NuclAT_0 | - | - |
| EW997_RS26515 (30499) | 30499..30651 | + | 153 | Protein_42 | FlmC family protein | - |
| EW997_RS25870 (30596) | 30596..30718 | + | 123 | WP_223200913.1 | Hok/Gef family protein | - |
| EW997_RS26520 (31171) | 31171..31344 | - | 174 | Protein_44 | hypothetical protein | - |
| EW997_RS25875 (31641) | 31641..31937 | + | 297 | WP_001272248.1 | hypothetical protein | - |
| EW997_RS25880 (32048) | 32048..32869 | + | 822 | WP_001234441.1 | DUF932 domain-containing protein | - |
| EW997_RS25885 (33166) | 33166..33768 | - | 603 | WP_077627411.1 | hypothetical protein | VF |
| EW997_RS25890 (34091) | 34091..34474 | + | 384 | WP_000124827.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EW997_RS25895 (34668) | 34668..35339 | + | 672 | WP_000283565.1 | conjugal transfer transcriptional regulator TraJ | - |
| EW997_RS25900 (35476) | 35476..35703 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| EW997_RS25905 (35736) | 35736..36101 | + | 366 | WP_001098999.1 | type IV conjugative transfer system pilin TraA | - |
| EW997_RS25910 (36116) | 36116..36427 | + | 312 | WP_000012116.1 | type IV conjugative transfer system protein TraL | - |
| EW997_RS25915 (36449) | 36449..37015 | + | 567 | WP_000399802.1 | type IV conjugative transfer system protein TraE | - |
| EW997_RS25920 (37002) | 37002..37730 | + | 729 | WP_001230778.1 | type-F conjugative transfer system secretin TraK | - |
| EW997_RS25925 (37730) | 37730..39181 | + | 1452 | WP_000146633.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| EW997_RS25930 (39171) | 39171..39737 | + | 567 | WP_000896600.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| EW997_RS25935 (39724) | 39724..40044 | + | 321 | WP_001057295.1 | conjugal transfer protein TrbD | - |
| EW997_RS25940 (40037) | 40037..40288 | + | 252 | WP_097306980.1 | conjugal transfer protein TrbG | - |
| EW997_RS25945 (40285) | 40285..40800 | + | 516 | WP_000809905.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EW997_RS25950 (40935) | 40935..41156 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| EW997_RS25955 (41316) | 41316..43943 | + | 2628 | WP_001064257.1 | type IV secretion system protein TraC | - |
| EW997_RS25960 (43940) | 43940..44326 | + | 387 | WP_000214091.1 | type-F conjugative transfer system protein TrbI | - |
| EW997_RS25965 (44323) | 44323..44955 | + | 633 | WP_001203744.1 | type-F conjugative transfer system protein TraW | - |
| EW997_RS25970 (44952) | 44952..45944 | + | 993 | WP_000830189.1 | conjugal transfer pilus assembly protein TraU | - |
| EW997_RS25975 (45970) | 45970..46278 | + | 309 | WP_000412445.1 | hypothetical protein | - |
| EW997_RS25980 (46448) | 46448..46765 | + | 318 | Protein_66 | TraU family protein | - |
| EW997_RS25985 (46791) | 46791..47252 | + | 462 | WP_001763758.1 | hypothetical protein | - |
| EW997_RS25990 (47282) | 47282..47734 | + | 453 | WP_097306979.1 | hypothetical protein | - |
| EW997_RS25995 (47762) | 47762..48400 | + | 639 | WP_001763759.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EW997_RS26000 (48397) | 48397..48768 | + | 372 | WP_000056340.1 | hypothetical protein | - |
| EW997_RS26005 (48793) | 48793..49215 | + | 423 | WP_001229313.1 | HNH endonuclease signature motif containing protein | - |
| EW997_RS26010 (49212) | 49212..51020 | + | 1809 | WP_000826166.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EW997_RS26015 (51047) | 51047..51307 | + | 261 | WP_001399778.1 | conjugal transfer protein TrbE | - |
| EW997_RS26020 (51300) | 51300..52043 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EW997_RS26025 (52057) | 52057..52398 | + | 342 | WP_001423199.1 | conjugal transfer protein TrbA | - |
| EW997_RS26030 (52466) | 52466..52714 | - | 249 | WP_074573982.1 | toxin ArtA | - |
| EW997_RS26035 (52795) | 52795..53079 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EW997_RS26040 (53066) | 53066..53611 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EW997_RS26045 (53601) | 53601..53789 | + | 189 | Protein_79 | conjugal transfer protein TrbJ | - |
| EW997_RS26050 (53841) | 53841..54518 | + | 678 | WP_074507812.1 | IS66 family transposase ISCro1 | Transposase |
| EW997_RS26055 (54518) | 54518..54865 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EW997_RS26060 (54885) | 54885..56456 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| EW997_RS26525 (56488) | 56488..56595 | + | 108 | Protein_83 | conjugal transfer protein TrbJ | - |
| EW997_RS26065 (56576) | 56576..56968 | + | 393 | WP_001505123.1 | F-type conjugal transfer protein TrbF | - |
| EW997_RS26070 (56955) | 56955..58328 | + | 1374 | WP_001403427.1 | conjugal transfer pilus assembly protein TraH | - |
| EW997_RS26075 (58325) | 58325..61141 | + | 2817 | WP_074573984.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| EW997_RS26080 (61174) | 61174..61695 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| EW997_RS26085 (61741) | 61741..62451 | + | 711 | WP_042032882.1 | conjugal transfer complement resistance protein TraT | - |
| EW997_RS26090 (62654) | 62654..63391 | + | 738 | WP_123001391.1 | hypothetical protein | - |
| EW997_RS26095 (63442) | 63442..65739 | + | 2298 | WP_216332919.1 | Coupling protein TraD | VF |
| EW997_RS26100 (65739) | 65739..71009 | + | 5271 | WP_097306973.1 | Multifunctional conjugation protein TraI | Relaxase |
| EW997_RS26105 (71058) | 71058..71477 | + | 420 | WP_000451342.1 | hypothetical protein | - |
| EW997_RS26110 (71532) | 71532..72233 | + | 702 | WP_244578345.1 | conjugal transfer pilus acetylase TraX | - |
| EW997_RS26115 (72288) | 72288..72848 | + | 561 | WP_000139346.1 | fertility inhibition protein FinO | - |
| EW997_RS26120 (72980) | 72980..73192 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| EW997_RS26125 (73437) | 73437..73898 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| EW997_RS26130 (73944) | 73944..74153 | + | 210 | WP_001301411.1 | hemolysin expression modulator Hha | - |
| EW997_RS26135 (74191) | 74191..74781 | + | 591 | WP_000766823.1 | DUF2726 domain-containing protein | - |
| EW997_RS26140 (75021) | 75021..75281 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| EW997_RS26145 (75516) | 75516..75590 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EW997_RS26150 (75583) | 75583..76440 | + | 858 | WP_001388371.1 | incFII family plasmid replication initiator RepA | - |
| EW997_RS26155 (77353) | 77353..77622 | + | 270 | WP_074573766.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| EW997_RS26160 (77622) | 77622..77900 | + | 279 | WP_244493824.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| EW997_RS26165 (77946) | 77946..78170 | + | 225 | WP_033879533.1 | hypothetical protein | - |
| EW997_RS26170 (78171) | 78171..78437 | + | 267 | WP_000215180.1 | hypothetical protein | - |
| EW997_RS26175 (78439) | 78439..78921 | + | 483 | WP_033879534.1 | hypothetical protein | - |
| EW997_RS26180 (79239) | 79239..79880 | - | 642 | Protein_107 | IS91 family transposase IS91 | Transposase |
| EW997_RS26185 (79986) | 79986..80822 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| EW997_RS26190 (80822) | 80822..81625 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|