MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 122211 bp
Accession: NZ_CP035879 Location: 4353194..4475404 Organism: Escherichia coli strain DS26-1 Replicon: chromosome
Accession: NZ_CP035879 Location: 4353194..4475404 Organism: Escherichia coli strain DS26-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW997_RS21525 (4349023) | 4349023..4350006 | + | 984 | WP_001124909.1 | substrate-binding domain-containing protein | - |
| EW997_RS21530 (4350029) | 4350029..4351540 | + | 1512 | WP_000493471.1 | sugar ABC transporter ATP-binding protein | - |
| EW997_RS21535 (4351565) | 4351565..4352563 | + | 999 | WP_097306919.1 | ABC transporter permease | - |
| EW997_RS21540 (4352596) | 4352596..4353690 | + | 1095 | WP_000700809.1 | zinc-binding dehydrogenase | - |
| EW997_RS21545 (4353702) | 4353702..4354574 | + | 873 | WP_000158547.1 | aldose 1-epimerase | - |
| EW997_RS21550 (4354622) | 4354622..4355044 | - | 423 | WP_001094726.1 | DoxX family protein | - |
| EW997_RS21555 (4355141) | 4355141..4356343 | - | 1203 | WP_000660797.1 | phenylpropionate dioxygenase ferredoxin reductase subunit | - |
| EW997_RS21560 (4356353) | 4356353..4357165 | - | 813 | WP_001581383.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | - |
| EW997_RS21565 (4357162) | 4357162..4357482 | - | 321 | WP_001080102.1 | bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | - |
| EW997_RS21570 (4357482) | 4357482..4358000 | - | 519 | WP_001276072.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| EW997_RS21575 (4357997) | 4357997..4359358 | - | 1362 | WP_000211172.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| EW997_RS21580 (4359494) | 4359494..4360384 | + | 891 | WP_000423257.1 | DNA-binding transcriptional regulator HcaR | - |
| EW997_RS21585 (4360544) | 4360544..4361683 | + | 1140 | WP_000244193.1 | 3-phenylpropionate MFS transporter | - |
| EW997_RS21590 (4361675) | 4361675..4362955 | - | 1281 | WP_001587716.1 | stationary phase inducible protein CsiE | - |
| EW997_RS21595 (4363146) | 4363146..4364000 | - | 855 | WP_001363400.1 | alpha/beta hydrolase | - |
| EW997_RS21600 (4364145) | 4364145..4364948 | - | 804 | WP_001363401.1 | inositol-1-monophosphatase | - |
| EW997_RS21605 (4365067) | 4365067..4365807 | + | 741 | WP_000940019.1 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | - |
| EW997_RS21610 (4366077) | 4366077..4366565 | + | 489 | WP_001241357.1 | Fe-S cluster assembly transcriptional regulator IscR | - |
| EW997_RS21615 (4366677) | 4366677..4367891 | + | 1215 | WP_001295373.1 | cysteine desulfurase | - |
| EW997_RS21620 (4367919) | 4367919..4368305 | + | 387 | WP_000331707.1 | Fe-S cluster assembly scaffold IscU | - |
| EW997_RS21625 (4368322) | 4368322..4368645 | + | 324 | WP_000028953.1 | iron-sulfur cluster assembly protein IscA | - |
| EW997_RS21630 (4368741) | 4368741..4369256 | + | 516 | WP_000384411.1 | co-chaperone HscB | - |
| EW997_RS21635 (4369273) | 4369273..4371123 | + | 1851 | WP_001363404.1 | Fe-S protein assembly chaperone HscA | - |
| EW997_RS21640 (4371125) | 4371125..4371460 | + | 336 | WP_001124469.1 | ISC system 2Fe-2S type ferredoxin | - |
| EW997_RS21645 (4371472) | 4371472..4371672 | + | 201 | WP_000523616.1 | Fe-S cluster assembly protein IscX | - |
| EW997_RS21650 (4371731) | 4371731..4373014 | + | 1284 | WP_000133574.1 | aminopeptidase PepB | - |
| EW997_RS21655 (4373156) | 4373156..4373932 | + | 777 | WP_001301604.1 | enhanced serine sensitivity protein SseB | - |
| EW997_RS26415 (4373964) | 4373964..4374089 | - | 126 | WP_001425189.1 | small toxic inner membrane protein TimP | - |
| EW997_RS21660 (4374425) | 4374425..4375270 | - | 846 | WP_000108616.1 | 3-mercaptopyruvate sulfurtransferase | - |
| EW997_RS21665 (4375477) | 4375477..4380438 | + | 4962 | WP_000736274.1 | alpha2-macroglobulin | - |
| EW997_RS21670 (4380439) | 4380439..4382751 | + | 2313 | WP_001137655.1 | peptidoglycan glycosyltransferase PbpC | - |
| EW997_RS21675 (4382900) | 4382900..4383331 | + | 432 | WP_000963837.1 | nucleoside-diphosphate kinase | - |
| EW997_RS21680 (4383481) | 4383481..4384635 | + | 1155 | WP_000003317.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| EW997_RS21685 (4384920) | 4384920..4385933 | + | 1014 | WP_001090850.1 | cytoskeleton protein RodZ | - |
| EW997_RS21690 (4385960) | 4385960..4387078 | + | 1119 | WP_000551807.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| EW997_RS21695 (4387189) | 4387189..4388463 | + | 1275 | WP_001107167.1 | histidine--tRNA ligase | - |
| EW997_RS21700 (4388481) | 4388481..4389101 | + | 621 | WP_000409205.1 | ancillary SecYEG translocon subunit YfgM | - |
| EW997_RS21705 (4389112) | 4389112..4390290 | + | 1179 | WP_001177043.1 | outer membrane protein assembly factor BamB | - |
| EW997_RS21710 (4390408) | 4390408..4391880 | + | 1473 | WP_000249410.1 | ribosome biogenesis GTPase Der | - |
| EW997_RS21715 (4391949) | 4391949..4392164 | + | 216 | WP_001297332.1 | zinc ribbon domain-containing protein | - |
| EW997_RS21720 (4392161) | 4392161..4393531 | - | 1371 | WP_000937933.1 | exodeoxyribonuclease VII large subunit | - |
| EW997_RS21725 (4393693) | 4393693..4395159 | + | 1467 | WP_001299507.1 | IMP dehydrogenase | - |
| EW997_RS21730 (4395228) | 4395228..4396805 | + | 1578 | WP_000138282.1 | glutamine-hydrolyzing GMP synthase | - |
| EW997_RS21735 (4397114) | 4397114..4398322 | + | 1209 | WP_001297323.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EW997_RS21740 (4398605) | 4398605..4398835 | + | 231 | WP_021542196.1 | AlpA family phage regulatory protein | - |
| EW997_RS21745 (4399075) | 4399075..4399974 | + | 900 | WP_023342659.1 | replication initiator protein A | - |
| EW997_RS26420 (4400430) | 4400430..4400540 | + | 111 | WP_230964502.1 | hypothetical protein | - |
| EW997_RS21755 (4401304) | 4401304..4401612 | - | 309 | WP_001297325.1 | hypothetical protein | - |
| EW997_RS21760 (4401779) | 4401779..4403317 | - | 1539 | WP_244578339.1 | P-type conjugative transfer protein TrbL | - |
| EW997_RS21765 (4403320) | 4403320..4403502 | - | 183 | WP_001565722.1 | hypothetical protein | - |
| EW997_RS21770 (4403505) | 4403505..4404296 | - | 792 | WP_001297334.1 | P-type conjugative transfer protein TrbJ | - |
| EW997_RS21775 (4404567) | 4404567..4404791 | - | 225 | WP_001565720.1 | hypothetical protein | - |
| EW997_RS21780 (4404794) | 4404794..4405003 | - | 210 | WP_000101768.1 | TraC family protein | - |
| EW997_RS21785 (4405740) | 4405740..4406816 | + | 1077 | WP_074507035.1 | SIR2 family protein | - |
| EW997_RS21790 (4406824) | 4406824..4408614 | + | 1791 | WP_074507033.1 | ATP-binding protein | - |
| EW997_RS21795 (4408676) | 4408676..4408873 | + | 198 | WP_001297329.1 | hypothetical protein | - |
| EW997_RS21800 (4409067) | 4409067..4409597 | - | 531 | WP_032194681.1 | DUF5384 family protein | - |
| EW997_RS21805 (4409658) | 4409658..4410439 | - | 782 | Protein_4263 | IS21 family transposase IS100 | Transposase |
| EW997_RS21810 (4410436) | 4410436..4411458 | - | 1023 | WP_000255946.1 | IS21 family transposase IS100kyp | Transposase |
| EW997_RS21815 (4411580) | 4411580..4412098 | - | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| EW997_RS21820 (4412409) | 4412409..4412600 | - | 192 | WP_000076001.1 | YfgG family protein | - |
| EW997_RS21825 (4412618) | 4412618..4412770 | + | 153 | WP_000017552.1 | hypothetical protein | - |
| EW997_RS21830 (4412952) | 4412952..4415195 | + | 2244 | WP_000772728.1 | hypothetical protein | VF |
| EW997_RS21835 (4415234) | 4415234..4416775 | - | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| EW997_RS21840 (4416780) | 4416780..4418846 | - | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| EW997_RS21845 (4419017) | 4419017..4419655 | - | 639 | WP_074506993.1 | phosphoribosylglycinamide formyltransferase | - |
| EW997_RS21850 (4419655) | 4419655..4420692 | - | 1038 | WP_001295474.1 | Phosphoribosylformylglycinamidine cyclo-ligase | VF |
| EW997_RS21855 (4421017) | 4421017..4421643 | + | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| EW997_RS21860 (4421729) | 4421729..4423018 | + | 1290 | WP_000198328.1 | uracil permease | - |
| EW997_RS21865 (4423113) | 4423113..4423814 | + | 702 | WP_001307333.1 | DnaA inactivator Hda | - |
| EW997_RS21870 (4423952) | 4423952..4424311 | - | 360 | WP_000166444.1 | arsenate reductase (glutaredoxin) | - |
| EW997_RS21875 (4424332) | 4424332..4425795 | - | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| EW997_RS21880 (4426008) | 4426008..4427069 | + | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| EW997_RS21890 (4427107) | 4427107..4427954 | - | 848 | Protein_4279 | formate transporter FocB | - |
| EW997_RS21895 (4427976) | 4427976..4429988 | - | 2013 | WP_001251558.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| EW997_RS21900 (4430018) | 4430018..4430431 | - | 414 | WP_000796789.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| EW997_RS21905 (4430424) | 4430424..4431182 | - | 759 | WP_000075570.1 | hydrogenase 4 catalytic subunit HyfI | - |
| EW997_RS21910 (4431179) | 4431179..4431724 | - | 546 | WP_000916058.1 | hydrogenase 4 subunit H | - |
| EW997_RS21915 (4431734) | 4431734..4433401 | - | 1668 | WP_001102276.1 | hydrogenase 4 catalytic subunit HyfG | - |
| EW997_RS21920 (4433391) | 4433391..4434971 | - | 1581 | WP_000122560.1 | hydrogenase 4 subunit F | - |
| EW997_RS21925 (4434976) | 4434976..4435626 | - | 651 | WP_000147985.1 | hydrogenase 4 membrane subunit | - |
| EW997_RS21930 (4435638) | 4435638..4436869 | - | 1232 | Protein_4287 | hydrogenase 4 subunit D | - |
| EW997_RS21935 (4436886) | 4436886..4437833 | - | 948 | WP_001311024.1 | hydrogenase 4 subunit HyfC | - |
| EW997_RS21940 (4437844) | 4437844..4439612 | - | 1769 | Protein_4289 | hydrogenase 4 subunit B | - |
| EW997_RS21945 (4439861) | 4439861..4440478 | - | 618 | WP_001299064.1 | hydrogenase 4 subunit HyfA | - |
| EW997_RS21950 (4440731) | 4440731..4441201 | - | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| EW997_RS21955 (4441201) | 4441201..4441773 | - | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| EW997_RS21960 (4441919) | 4441919..4442797 | + | 879 | WP_097306886.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| EW997_RS21965 (4442814) | 4442814..4443848 | + | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| EW997_RS21970 (4444061) | 4444061..4444774 | + | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| EW997_RS21975 (4444928) | 4444928..4445155 | + | 228 | WP_000450524.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| EW997_RS21980 (4445155) | 4445155..4445553 | + | 399 | WP_000911330.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EW997_RS21985 (4445700) | 4445700..4446563 | + | 864 | WP_001267507.1 | neutral zinc metallopeptidase | - |
| EW997_RS21990 (4446578) | 4446578..4448593 | + | 2016 | WP_000829323.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| EW997_RS21995 (4448667) | 4448667..4449365 | + | 699 | WP_000679823.1 | esterase | - |
| EW997_RS22000 (4449475) | 4449475..4449675 | - | 201 | WP_000383836.1 | YpfN family protein | - |
| EW997_RS22005 (4449703) | 4449703..4450830 | - | 1128 | WP_001277801.1 | succinyl-diaminopimelate desuccinylase | - |
| EW997_RS22010 (4450834) | 4450834..4451190 | - | 357 | WP_000258247.1 | ArsC family reductase | - |
| EW997_RS22015 (4451571) | 4451571..4451630 | + | 60 | WP_001386977.1 | protein YpfM | - |
| EW997_RS22020 (4451729) | 4451729..4454842 | - | 3114 | WP_001273141.1 | Multidrug resistance protein MdtB | VF |
| EW997_RS22025 (4455006) | 4455006..4456706 | - | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| EW997_RS22030 (4456912) | 4456912..4458891 | + | 1980 | WP_074523978.1 | formate-dependent uric acid utilization protein AegA | - |
| EW997_RS22035 (4458959) | 4458959..4459534 | + | 576 | WP_000193711.1 | GDP-mannose pyrophosphatase NudK | - |
| EW997_RS22040 (4459660) | 4459660..4460703 | + | 1044 | WP_001270524.1 | DUF1176 domain-containing protein | - |
| EW997_RS22045 (4460799) | 4460799..4462802 | - | 2004 | WP_000087298.1 | transketolase | - |
| EW997_RS22050 (4462822) | 4462822..4463772 | - | 951 | WP_001003709.1 | transaldolase | - |
| EW997_RS22055 (4464061) | 4464061..4466340 | + | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| EW997_RS22060 (4466633) | 4466633..4466968 | + | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| EW997_RS22065 (4466981) | 4466981..4467460 | + | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| EW997_RS22070 (4467435) | 4467435..4468136 | + | 702 | WP_000733903.1 | ethanolamine utilization acetate kinase EutQ | - |
| EW997_RS22075 (4468133) | 4468133..4468936 | + | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| EW997_RS22080 (4468933) | 4468933..4469949 | + | 1017 | WP_000582978.1 | phosphate acetyltransferase | - |
| EW997_RS22085 (4469988) | 4469988..4470281 | + | 294 | WP_000387713.1 | ethanolamine utilization microcompartment protein EutM | - |
| EW997_RS22090 (4470388) | 4470388..4470675 | + | 288 | WP_000762196.1 | ethanolamine utilization microcompartment protein EutN | - |
| EW997_RS22095 (4470687) | 4470687..4472090 | + | 1404 | WP_074506989.1 | Gamma-glutamyl phosphate reductase | VF |
| EW997_RS22100 (4472101) | 4472101..4472937 | + | 837 | WP_000929726.1 | ethanolamine utilization protein EutJ | - |
| EW997_RS22105 (4472927) | 4472927..4474114 | + | 1188 | WP_001299054.1 | hypothetical protein | VF |
| EW997_RS22110 (4474231) | 4474231..4475457 | + | 1227 | WP_000512372.1 | ethanolamine utilization protein EutH | - |
| EW997_RS22115 (4475454) | 4475454..4476857 | + | 1404 | WP_001097452.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| EW997_RS22120 (4477382) | 4477382..4478076 | + | 695 | WP_085950185.1 | IS1 family transposase | - |
| EW997_RS22125 (4478195) | 4478195..4479004 | - | 810 | WP_000490354.1 | glutamate racemase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|