MGE detailed information
MGE type: Mobilizable plasmid MGE length: 53738 bp
Accession: NZ_CP035873 Location: 1..53738 Organism: Escherichia coli strain E2528-C1 Replicon: plasmid pE2528C1_53
Accession: NZ_CP035873 Location: 1..53738 Organism: Escherichia coli strain E2528-C1 Replicon: plasmid pE2528C1_53
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW999_RS25110 (1139) | 1139..1486 | - | 348 | WP_096947456.1 | IS66 family transposase ISCro1 | Transposase |
| EW999_RS25115 (1486) | 1486..2136 | - | 651 | WP_001735270.1 | IS66 family transposase IS679 | Transposase |
| EW999_RS25120 (2304) | 2304..2553 | - | 250 | Protein_3 | hypothetical protein | - |
| EW999_RS25125 (2849) | 2849..3172 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| EW999_RS25130 (3231) | 3231..3473 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| EW999_RS25740 (3740) | 3740..3982 | + | 243 | WP_001365577.1 | hypothetical protein | - |
| EW999_RS25135 (4454) | 4454..4750 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| EW999_RS25140 (4860) | 4860..5681 | + | 822 | WP_001234437.1 | DUF932 domain-containing protein | - |
| EW999_RS25145 (5977) | 5977..6567 | - | 591 | WP_000252684.1 | hypothetical protein | VF |
| EW999_RS25150 (6902) | 6902..7285 | + | 384 | WP_001342639.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EW999_RS25160 (8431) | 8431..8643 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| EW999_RS25165 (8889) | 8889..9350 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| EW999_RS25170 (9396) | 9396..9605 | + | 210 | WP_032199785.1 | hemolysin expression modulator Hha | - |
| EW999_RS25175 (9643) | 9643..10233 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| EW999_RS25180 (10441) | 10441..11180 | + | 740 | Protein_16 | IS3 family transposase IS629 | Transposase |
| EW999_RS25185 (11853) | 11853..13361 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| EW999_RS25190 (13451) | 13451..13924 | + | 474 | Protein_18 | IS3 family transposase IS629 | Transposase |
| EW999_RS25745 (13967) | 13967..14434 | - | 468 | Protein_19 | IS3 family transposase | - |
| EW999_RS25200 (14523) | 14523..14777 | - | 255 | Protein_20 | transposase family protein | - |
| EW999_RS25205 (15591) | 15591..15893 | + | 303 | WP_024169763.1 | Major pilu subunit operon regulatory protein PapB | VF |
| EW999_RS25210 (16184) | 16184..17035 | + | 852 | WP_001734729.1 | type 4b pilus CFA/III transcriptional regulator CofS | - |
| EW999_RS25215 (17048) | 17048..17491 | + | 444 | WP_001734730.1 | hypothetical protein | VF |
| EW999_RS25220 (17792) | 17792..18508 | + | 717 | WP_110409206.1 | Toxin coregulated pilin | VF |
| EW999_RS25225 (18569) | 18569..20140 | + | 1572 | WP_001734732.1 | type 4b pilus CFA/III minor pilin CofB | - |
| EW999_RS25230 (20157) | 20157..20570 | + | 414 | WP_001734733.1 | type 4b pilus CFA/III biogenesis protein CofC | - |
| EW999_RS25235 (20588) | 20588..22045 | + | 1458 | WP_001734734.1 | type 4b pilus CFA/III secretin CofD | - |
| EW999_RS25240 (22047) | 22047..22607 | + | 561 | WP_024169764.1 | type 4b pilus CFA/III biogenesis protein CofE | - |
| EW999_RS25245 (22609) | 22609..23436 | + | 828 | WP_001734735.1 | type 4b pilus CFA/III biogenesis protein CofF | - |
| EW999_RS25250 (23424) | 23424..23909 | + | 486 | WP_001734737.1 | type 4b pilus CFA/III biogenesis protein CofG | - |
| EW999_RS25255 (24107) | 24107..25441 | + | 1335 | WP_001734738.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| EW999_RS25260 (25425) | 25425..26450 | + | 1026 | WP_001734739.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EW999_RS25265 (26464) | 26464..27510 | + | 1047 | WP_001734741.1 | colonization factor CofJ | - |
| EW999_RS25270 (27513) | 27513..28334 | + | 822 | WP_001734742.1 | Leader peptidase PppA | VF |
| EW999_RS25750 (28397) | 28397..28656 | + | 260 | Protein_35 | hypothetical protein | - |
| EW999_RS25280 (29079) | 29079..29276 | + | 198 | Protein_36 | traC domain protein | - |
| EW999_RS25285 (29331) | 29331..30008 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EW999_RS25290 (30008) | 30008..30355 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EW999_RS25295 (30375) | 30375..31946 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| EW999_RS25300 (31987) | 31987..32136 | + | 150 | WP_077637090.1 | traC domain protein | - |
| EW999_RS25310 (32437) | 32437..32697 | + | 261 | WP_005768671.1 | replication regulatory protein RepA | - |
| EW999_RS25755 (32723) | 32723..32962 | - | 240 | WP_235838394.1 | replication protein RepA | - |
| EW999_RS25760 (32953) | 32953..33000 | + | 48 | WP_235838393.1 | hypothetical protein | - |
| EW999_RS25320 (32993) | 32993..34015 | + | 1023 | WP_032200411.1 | plasmid replication initiator RepA | - |
| EW999_RS25325 (34722) | 34722..34862 | + | 141 | WP_166426637.1 | hypothetical protein | - |
| EW999_RS25330 (34935) | 34935..35204 | + | 270 | WP_000079945.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| EW999_RS25335 (35204) | 35204..35482 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| EW999_RS25340 (35554) | 35554..35732 | + | 179 | Protein_48 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EW999_RS25345 (35803) | 35803..36684 | + | 882 | WP_000005461.1 | hypothetical protein | - |
| EW999_RS25350 (36619) | 36619..37038 | - | 420 | WP_024181414.1 | hypothetical protein | - |
| EW999_RS25355 (37147) | 37147..37497 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| EW999_RS25360 (37500) | 37500..38462 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| EW999_RS25765 (38609) | 38609..38902 | + | 294 | WP_047081703.1 | hypothetical protein | - |
| EW999_RS25365 (38997) | 38997..39899 | + | 903 | WP_216311848.1 | DUF1281 domain-containing protein | - |
| EW999_RS25370 (39896) | 39896..40207 | + | 312 | WP_167553962.1 | hypothetical protein | - |
| EW999_RS25375 (40283) | 40283..40966 | + | 684 | WP_000086125.1 | DNA methylase | - |
| EW999_RS25380 (40967) | 40967..41188 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| EW999_RS25385 (41082) | 41082..41636 | + | 555 | WP_126130113.1 | DUF1380 family protein | - |
| EW999_RS25390 (41681) | 41681..42451 | + | 771 | WP_159380057.1 | hypothetical protein | - |
| EW999_RS25395 (42866) | 42866..43291 | + | 426 | WP_001198882.1 | antirestriction protein | - |
| EW999_RS25400 (43338) | 43338..43760 | + | 423 | WP_032200428.1 | DUF1380 family protein | - |
| EW999_RS25405 (43757) | 43757..43948 | + | 192 | WP_032200427.1 | hypothetical protein | - |
| EW999_RS25410 (44220) | 44220..44468 | - | 249 | WP_071998823.1 | hypothetical protein | - |
| EW999_RS25415 (44983) | 44983..45213 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| EW999_RS25420 (45265) | 45265..46626 | + | 1362 | WP_000170686.1 | DUF3560 domain-containing protein | - |
| EW999_RS25425 (46673) | 46673..47236 | + | 564 | WP_032200425.1 | class I SAM-dependent methyltransferase | - |
| EW999_RS25770 (47236) | 47236..47484 | + | 249 | WP_242789073.1 | hypothetical protein | - |
| EW999_RS25775 (47388) | 47388..47654 | + | 267 | WP_071828223.1 | hypothetical protein | - |
| EW999_RS25430 (48128) | 48128..48655 | + | 528 | WP_000290789.1 | single-stranded DNA-binding protein | - |
| EW999_RS25435 (48712) | 48712..48945 | + | 234 | WP_000005975.1 | DUF905 domain-containing protein | - |
| EW999_RS25440 (49006) | 49006..50969 | + | 1964 | Protein_71 | ParB/RepB/Spo0J family partition protein | - |
| EW999_RS25445 (51024) | 51024..51458 | + | 435 | WP_000845954.1 | conjugation system SOS inhibitor PsiB | - |
| EW999_RS25450 (51455) | 51455..52174 | + | 720 | WP_216311846.1 | plasmid SOS inhibition protein A | - |
| EW999_RS25455 (52174) | 52174..52692 | + | 519 | WP_001178556.1 | hypothetical protein | - |
| - (52668) | 52668..52802 | + | 135 | NuclAT_0 | - | - |
| - (52668) | 52668..52802 | + | 135 | NuclAT_0 | - | - |
| - (52668) | 52668..52802 | + | 135 | NuclAT_0 | - | - |
| - (52668) | 52668..52802 | + | 135 | NuclAT_0 | - | - |
| - (52668) | 52668..52802 | - | 135 | NuclAT_0 | - | - |
| EW999_RS25780 (52810) | 52810..52962 | + | 153 | Protein_75 | FlmC family protein | - |
| EW999_RS25460 (52907) | 52907..53029 | + | 123 | WP_223200913.1 | Hok/Gef family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|