MGE detailed information
MGE type: Conjugative plasmid MGE length: 95804 bp
Accession: NZ_CP035871 Location: 1..95804 Organism: Escherichia coli strain E2528-C1 Replicon: plasmid pE2528C1_96
Accession: NZ_CP035871 Location: 1..95804 Organism: Escherichia coli strain E2528-C1 Replicon: plasmid pE2528C1_96
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW999_RS24055 | 672..1058 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| EW999_RS24060 | 1051..1371 | - | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| EW999_RS24065 | 1815..3020 | + | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| EW999_RS24070 | 3251..3370 | + | 120 | Protein_4 | LysR family transcriptional regulator | - |
| EW999_RS24075 | 3386..4594 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| EW999_RS24080 | 4746..5021 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EW999_RS24085 | 5021..5305 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EW999_RS24090 | 6210..7082 | - | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| EW999_RS24095 | 7786..8427 | + | 642 | WP_000335849.1 | transcription termination/antitermination NusG family protein | - |
| EW999_RS24100 | 8568..9230 | + | 663 | WP_000154142.1 | hypothetical protein | - |
| EW999_RS24105 | 9497..10117 | + | 621 | WP_000176497.1 | DUF1449 family protein | - |
| EW999_RS24110 | 10144..11838 | + | 1695 | WP_000482665.1 | flotillin family protein | - |
| EW999_RS24115 | 11919..12161 | + | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| EW999_RS24120 | 12277..12597 | + | 321 | WP_001447108.1 | hypothetical protein | - |
| EW999_RS24125 | 12838..13908 | + | 1071 | WP_000730430.1 | hypothetical protein | VF |
| EW999_RS24130 | 13936..14349 | + | 414 | WP_001345457.1 | hypothetical protein | VF |
| EW999_RS24135 | 14381..16000 | + | 1620 | WP_001035558.1 | Outer membrane lipoprotein BfpB | VF |
| EW999_RS24140 | 16021..17316 | + | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| EW999_RS24145 | 17306..17764 | + | 459 | WP_000095885.1 | hypothetical protein | VF |
| EW999_RS24150 | 17867..19375 | + | 1509 | WP_000880807.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| EW999_RS24155 | 19377..20471 | + | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| EW999_RS24160 | 20533..21069 | + | 537 | WP_000111534.1 | hypothetical protein | VF |
| EW999_RS24165 | 21114..21599 | + | 486 | WP_001080767.1 | hypothetical protein | VF |
| EW999_RS24170 | 21615..22241 | + | 627 | WP_000939245.1 | prepilin peptidase | - |
| EW999_RS24175 | 22259..23620 | + | 1362 | WP_001168171.1 | hypothetical protein | VF |
| EW999_RS25695 | 23734..23928 | + | 195 | Protein_26 | integrase | - |
| EW999_RS24180 | 24093..24914 | + | 822 | WP_000845373.1 | hypothetical protein | - |
| EW999_RS24185 | 25016..26218 | + | 1203 | WP_000979994.1 | conjugal transfer protein TraF | - |
| EW999_RS24190 | 26322..26780 | + | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| EW999_RS24195 | 26777..27613 | + | 837 | WP_000745049.1 | hypothetical protein | VF |
| EW999_RS24200 | 27597..28745 | + | 1149 | WP_000775210.1 | putative protein YggR | VF |
| EW999_RS24205 | 28742..29032 | + | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| EW999_RS24210 | 29096..33157 | + | 4062 | WP_000842453.1 | DUF5710 domain-containing protein | - |
| EW999_RS24215 | 33174..33524 | + | 351 | WP_001056367.1 | hypothetical protein | - |
| EW999_RS24220 | 33536..34231 | + | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| EW999_RS24225 | 34242..35216 | + | 975 | WP_000547385.1 | hypothetical protein | VF |
| EW999_RS24230 | 35220..36557 | + | 1338 | WP_001272018.1 | conjugal transfer protein TraO | - |
| EW999_RS24235 | 36554..37267 | + | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| EW999_RS24240 | 37264..37794 | + | 531 | WP_000987021.1 | conjugal transfer protein TraQ | - |
| EW999_RS24245 | 37841..38239 | + | 399 | WP_000088813.1 | hypothetical protein | - |
| EW999_RS25700 | 38296..38448 | + | 153 | Protein_41 | TraS | - |
| EW999_RS24255 | 38462..39280 | + | 819 | WP_072105968.1 | conjugal transfer protein TraT | - |
| EW999_RS24260 | 39575..42619 | + | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| EW999_RS24265 | 42619..43239 | + | 621 | WP_000286854.1 | hypothetical protein | - |
| EW999_RS24270 | 43197..44402 | + | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| EW999_RS24275 | 44399..44968 | + | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| EW999_RS24280 | 45043..47208 | + | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| EW999_RS24285 | 47296..47949 | + | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EW999_RS24290 | 48223..49809 | + | 1587 | WP_000004563.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| EW999_RS24295 | 49947..50099 | - | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| EW999_RS24300 | 50429..50671 | + | 243 | WP_000650923.1 | hypothetical protein | - |
| EW999_RS24305 | 50759..50950 | + | 192 | WP_000751583.1 | hypothetical protein | - |
| EW999_RS24310 | 50962..51330 | + | 369 | WP_001345852.1 | hypothetical protein | - |
| EW999_RS24315 | 51334..51549 | + | 216 | WP_000266543.1 | hypothetical protein | - |
| EW999_RS24320 | 51747..52370 | - | 624 | WP_001155252.1 | helix-turn-helix domain-containing protein | - |
| EW999_RS24325 | 52529..52996 | + | 468 | WP_000598962.1 | thermonuclease family protein | - |
| EW999_RS24330 | 53146..53322 | + | 177 | WP_001054907.1 | hypothetical protein | - |
| EW999_RS24335 | 53385..53636 | - | 252 | WP_001081067.1 | DinQ-like type I toxin DqlB | - |
| EW999_RS24340 | 54217..54363 | - | 147 | WP_001346191.1 | hypothetical protein | - |
| EW999_RS24345 | 54701..56008 | + | 1308 | WP_000121918.1 | IncI1-type conjugal transfer protein TrbA | - |
| EW999_RS24350 | 56005..57129 | + | 1125 | WP_000152378.1 | DsbC family protein | - |
| EW999_RS24355 | 57110..59413 | + | 2304 | WP_000077663.1 | F-type conjugative transfer protein TrbC | - |
| EW999_RS24360 | 60277..61092 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| EW999_RS24365 | 61179..61355 | + | 177 | Protein_64 | phosphoglucosamine mutase | - |
| EW999_RS24370 | 61326..61604 | - | 279 | Protein_65 | Arm DNA-binding domain-containing protein | - |
| EW999_RS24375 | 61702..62049 | + | 348 | WP_157700089.1 | hypothetical protein | - |
| EW999_RS24380 | 62147..62578 | - | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| EW999_RS24385 | 62646..65357 | - | 2712 | WP_000991384.1 | Protein TraI | Relaxase |
| EW999_RS24390 | 65369..65701 | - | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| EW999_RS24395 | 65934..66269 | + | 336 | WP_000157083.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| EW999_RS24400 | 66355..67203 | - | 849 | WP_001077034.1 | DUF4942 domain-containing protein | - |
| EW999_RS24405 | 67784..68035 | + | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| EW999_RS24410 | 68066..68311 | - | 246 | WP_001260883.1 | hypothetical protein | - |
| EW999_RS24415 | 68311..69237 | - | 927 | WP_000038335.1 | Recombination-promoting nuclease RpnA | VF |
| EW999_RS24420 | 69234..69623 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| EW999_RS24425 | 69800..70066 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| EW999_RS24430 | 70159..70593 | - | 435 | WP_000218862.1 | hypothetical protein | - |
| EW999_RS24435 | 71326..71826 | - | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| EW999_RS24440 | 72288..72884 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| EW999_RS24445 | 72881..73600 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| EW999_RS24450 | 73597..74031 | - | 435 | WP_000845903.1 | conjugation system SOS inhibitor PsiB | - |
| EW999_RS24455 | 74086..76044 | - | 1959 | WP_001145476.1 | ParB/RepB/Spo0J family partition protein | - |
| EW999_RS24460 | 76103..76336 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| EW999_RS24465 | 76394..76921 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| EW999_RS24470 | 77274..77555 | - | 282 | WP_154671919.1 | hypothetical protein | - |
| EW999_RS24475 | 77693..77884 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| EW999_RS24480 | 77881..78303 | - | 423 | WP_000271688.1 | DUF1380 family protein | - |
| EW999_RS24485 | 78350..78775 | - | 426 | WP_001198900.1 | antirestriction protein | - |
| EW999_RS24490 | 79191..79961 | - | 771 | WP_001006204.1 | hypothetical protein | - |
| EW999_RS24495 | 80006..80524 | - | 519 | WP_223168556.1 | DUF1380 family protein | - |
| EW999_RS24500 | 80454..80675 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| EW999_RS24505 | 80676..81359 | - | 684 | WP_000086137.1 | DNA methylase | - |
| EW999_RS24510 | 81435..81746 | - | 312 | WP_031935767.1 | hypothetical protein | - |
| EW999_RS24515 | 81743..82645 | - | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| EW999_RS24520 | 83064..83312 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| EW999_RS24525 | 83309..83746 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EW999_RS24530 | 83746..85017 | + | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| EW999_RS24535 | 85221..85847 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| EW999_RS24540 | 85844..86146 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| EW999_RS24545 | 86697..87227 | - | 531 | Protein_100 | hypothetical protein | - |
| EW999_RS24550 | 87281..88494 | + | 1214 | WP_164474068.1 | IS3 family transposase IS629 | Transposase |
| EW999_RS24555 | 88538..89356 | - | 819 | Protein_102 | hypothetical protein | - |
| EW999_RS24560 | 89710..90312 | + | 603 | WP_000517694.1 | ProQ/FINO family protein | - |
| EW999_RS24570 | 90550..90816 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| EW999_RS24575 | 91085..91288 | - | 204 | Protein_105 | hypothetical protein | - |
| EW999_RS24580 | 91466..92674 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| EW999_RS24585 | 92684..93100 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| EW999_RS24590 | 93188..93781 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| EW999_RS24595 | 93894..95099 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| EW999_RS24600 | 95181..95804 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|