MGE detailed information
MGE type: Prophage MGE length: 84719 bp
Accession: NZ_CP035870 Location: 425308..510026 Organism: Escherichia coli strain E2528-C1 Replicon: chromosome
Accession: NZ_CP035870 Location: 425308..510026 Organism: Escherichia coli strain E2528-C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW999_RS02070 () | 422356..423327 | - | 972 | WP_000564725.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| EW999_RS02075 () | 423324..424067 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| EW999_RS02080 () | 424108..424503 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| EW999_RS02085 () | 424556..425326 | - | 771 | WP_050438170.1 | DUF72 domain-containing protein | - |
| EW999_RS02090 () | 425308..426621 | - | 1314 | WP_016239042.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EW999_RS02095 () | 426677..426913 | - | 237 | WP_000528718.1 | excisionase family protein | - |
| EW999_RS02100 () | 426922..427068 | - | 147 | WP_001030139.1 | hypothetical protein | - |
| EW999_RS02105 () | 427072..427314 | - | 243 | WP_001538858.1 | DUF4222 domain-containing protein | - |
| EW999_RS02110 () | 427346..427717 | - | 372 | WP_032199838.1 | DUF5406 family protein | - |
| EW999_RS02115 () | 427759..428586 | - | 828 | WP_001538856.1 | SPFH domain-containing protein | - |
| EW999_RS02120 () | 428832..429224 | - | 393 | WP_001538854.1 | hypothetical protein | - |
| EW999_RS25495 () | 429221..429439 | - | 219 | WP_072148194.1 | hypothetical protein | - |
| EW999_RS02125 () | 429411..429626 | - | 216 | WP_000002321.1 | hypothetical protein | - |
| EW999_RS02130 () | 429626..429985 | - | 360 | WP_032199837.1 | hypothetical protein | - |
| EW999_RS02135 () | 430181..430387 | - | 207 | WP_001436867.1 | hypothetical protein | - |
| EW999_RS02140 () | 430675..431223 | - | 549 | WP_023151472.1 | helix-turn-helix transcriptional regulator | - |
| EW999_RS02145 () | 431370..432059 | - | 690 | WP_000800136.1 | LexA family transcriptional regulator | - |
| EW999_RS02150 () | 432193..432483 | + | 291 | WP_000398850.1 | YdaS family helix-turn-helix protein | - |
| EW999_RS02155 () | 432480..433187 | + | 708 | WP_001090259.1 | Rha family transcriptional regulator | - |
| EW999_RS02160 () | 433297..433959 | + | 663 | WP_032199836.1 | ash family protein | - |
| EW999_RS02165 () | 433956..434150 | + | 195 | WP_000626792.1 | hypothetical protein | - |
| EW999_RS02170 () | 434147..434371 | + | 225 | WP_000618007.1 | hypothetical protein | - |
| EW999_RS02175 () | 434368..434667 | + | 300 | WP_000995578.1 | hypothetical protein | - |
| EW999_RS02180 () | 434664..435656 | + | 993 | WP_032199835.1 | hypothetical protein | - |
| EW999_RS02185 () | 435667..436545 | + | 879 | WP_032199834.1 | ATP-binding protein | - |
| EW999_RS02190 () | 436542..437933 | + | 1392 | WP_032199833.1 | replicative DNA helicase | - |
| EW999_RS02195 () | 437930..438187 | + | 258 | WP_032199832.1 | hypothetical protein | - |
| EW999_RS02200 () | 438239..439228 | + | 990 | WP_001436039.1 | DUF968 domain-containing protein | - |
| EW999_RS02205 () | 439241..439600 | + | 360 | WP_001217422.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EW999_RS02210 () | 439609..440151 | + | 543 | WP_000640018.1 | DUF1133 family protein | - |
| EW999_RS02215 () | 440464..440661 | + | 198 | WP_000917691.1 | hypothetical protein | - |
| EW999_RS02220 () | 440812..441861 | + | 1050 | WP_032205543.1 | site-specific DNA-methyltransferase | - |
| EW999_RS02240 () | 442336..442761 | + | 426 | WP_032239021.1 | tellurite resistance TerB family protein | - |
| EW999_RS02245 () | 442758..442910 | + | 153 | WP_032219803.1 | DUF3927 family protein | - |
| EW999_RS02250 () | 442997..443389 | + | 393 | WP_001355862.1 | putative holin | - |
| EW999_RS02255 () | 443379..443654 | + | 276 | WP_000950576.1 | phage holin family protein | - |
| EW999_RS02260 () | 443657..444034 | + | 378 | WP_001117825.1 | M15 family metallopeptidase | - |
| EW999_RS02265 () | 444167..444280 | + | 114 | WP_001297666.1 | hypothetical protein | - |
| EW999_RS02270 () | 444309..444464 | + | 156 | WP_001138287.1 | hypothetical protein | - |
| EW999_RS02275 () | 444807..445160 | + | 354 | WP_096934181.1 | HNH endonuclease signature motif containing protein | - |
| EW999_RS02280 () | 445305..445787 | + | 483 | WP_024166447.1 | phage terminase small subunit P27 family | - |
| EW999_RS02285 () | 445787..447544 | + | 1758 | WP_096985425.1 | terminase large subunit | - |
| EW999_RS02290 () | 447556..447738 | + | 183 | WP_000478597.1 | hypothetical protein | - |
| EW999_RS02295 () | 447738..448979 | + | 1242 | WP_032199929.1 | phage portal protein | - |
| EW999_RS02300 () | 448957..449607 | + | 651 | WP_032199928.1 | HK97 family phage prohead protease | - |
| EW999_RS02305 () | 449621..450847 | + | 1227 | WP_000257482.1 | phage major capsid protein | - |
| EW999_RS02310 () | 450893..451216 | + | 324 | WP_000924706.1 | head-tail connector protein | - |
| EW999_RS02315 () | 451213..451629 | + | 417 | WP_000702446.1 | phage head closure protein | - |
| EW999_RS02320 () | 451595..452119 | + | 525 | WP_032199925.1 | hypothetical protein | - |
| EW999_RS02325 () | 452116..452679 | + | 564 | WP_000779448.1 | hypothetical protein | - |
| EW999_RS02330 () | 452689..452850 | + | 162 | WP_000497741.1 | DUF2635 domain-containing protein | - |
| EW999_RS02335 () | 452847..454343 | + | 1497 | WP_032199924.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| EW999_RS02340 () | 454343..454699 | + | 357 | WP_001062340.1 | phage tail tube protein | - |
| EW999_RS02345 () | 454699..455034 | + | 336 | WP_001251341.1 | phage tail assembly protein | - |
| EW999_RS02350 () | 455119..457068 | + | 1950 | WP_032199923.1 | phage tail tape measure protein | - |
| EW999_RS02355 () | 457084..458475 | + | 1392 | WP_032199922.1 | DNA circularization N-terminal domain-containing protein | - |
| EW999_RS02360 () | 458472..459527 | + | 1056 | WP_032199921.1 | baseplate protein | - |
| EW999_RS02365 () | 459527..460060 | + | 534 | WP_001013087.1 | phage baseplate assembly protein V | - |
| EW999_RS02370 () | 460066..460479 | + | 414 | WP_032199920.1 | phage GP46 family protein | - |
| EW999_RS02375 () | 460472..461554 | + | 1083 | WP_000785585.1 | baseplate J/gp47 family protein | - |
| EW999_RS25500 () | 461554..462123 | + | 570 | Protein_466 | DUF2313 domain-containing protein | - |
| EW999_RS02385 () | 462537..463586 | + | 1050 | WP_032199919.1 | hypothetical protein | - |
| EW999_RS02390 () | 463617..464726 | + | 1110 | WP_032199917.1 | hypothetical protein | - |
| EW999_RS02395 () | 464741..465271 | + | 531 | WP_032199916.1 | tail fiber assembly protein | - |
| EW999_RS25505 () | 465326..465442 | + | 117 | Protein_470 | DUF4376 domain-containing protein | - |
| EW999_RS25510 () | 465757..465858 | - | 102 | Protein_471 | hypothetical protein | - |
| EW999_RS02400 () | 465855..466421 | - | 567 | WP_000891599.1 | hydrolase | - |
| EW999_RS02405 () | 466731..468503 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| EW999_RS02410 () | 468621..469073 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| EW999_RS02415 () | 469102..469842 | + | 741 | WP_000907234.1 | transcriptional regulatory protein YebC | VF |
| EW999_RS02420 () | 469877..470398 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| EW999_RS02425 () | 470400..471002 | - | 603 | WP_001024904.1 | YebB family permuted papain-like enzyme | - |
| EW999_RS02430 () | 471073..471138 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| EW999_RS02435 () | 471277..471888 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| EW999_RS02440 () | 471897..472907 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| EW999_RS02445 () | 473054..473839 | - | 786 | WP_000571479.1 | hypothetical protein | VF |
| EW999_RS02450 () | 473836..474591 | - | 756 | WP_000202996.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| EW999_RS02455 () | 474670..475602 | + | 933 | WP_001300644.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| EW999_RS02460 () | 475618..476940 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| EW999_RS02465 () | 477060..478031 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| EW999_RS02470 () | 478162..479604 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| EW999_RS02475 () | 479732..480601 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| EW999_RS02480 () | 480940..482415 | + | 1476 | WP_000301719.1 | glucose-6-phosphate dehydrogenase | - |
| EW999_RS02485 () | 482650..484461 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| EW999_RS02490 () | 484498..485139 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EW999_RS02495 () | 485195..486373 | - | 1179 | WP_000173449.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EW999_RS02500 () | 486507..486797 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| EW999_RS02505 () | 486864..487220 | + | 357 | WP_001295500.1 | protein YebF | - |
| EW999_RS02510 () | 487547..488206 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| EW999_RS02515 () | 488415..490475 | + | 2061 | WP_000936952.1 | oligopeptidase B | - |
| EW999_RS02520 () | 490472..491134 | - | 663 | WP_000944258.1 | exodeoxyribonuclease X | - |
| EW999_RS02525 () | 491158..491814 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| EW999_RS02530 () | 491916..492146 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| EW999_RS02535 () | 492285..492659 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| EW999_RS02540 () | 492663..493535 | + | 873 | WP_000879295.1 | copper homeostasis membrane protein CopD | - |
| EW999_RS02545 () | 493548..493889 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 493917..494188 | - | 272 | - | - | Antitoxin Detail |
| - | 494047..494150 | + | 104 | - | - | Toxin Detail |
| EW999_RS02550 () | 494285..494941 | + | 657 | WP_000812732.1 | protein-serine/threonine phosphatase | - |
| EW999_RS02555 () | 494942..495133 | - | 192 | WP_001338167.1 | YebW family protein | - |
| EW999_RS02560 () | 495238..495474 | - | 237 | WP_001338166.1 | YebV family protein | - |
| EW999_RS02565 () | 495592..497031 | - | 1440 | WP_001397399.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EW999_RS02570 () | 497111..499744 | - | 2634 | WP_001735355.1 | hypothetical protein | VF |
| EW999_RS02575 () | 499713..500996 | - | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| EW999_RS02580 () | 501126..501623 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| EW999_RS02585 () | 501720..502418 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| EW999_RS02590 () | 502438..504486 | + | 2049 | WP_032199908.1 | carboxy terminal-processing peptidase | - |
| EW999_RS02595 () | 504678..505559 | + | 882 | WP_000984517.1 | protease HtpX | - |
| EW999_RS02600 () | 505605..506978 | - | 1374 | WP_001351757.1 | MFS transporter | - |
| EW999_RS02605 () | 507155..507946 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| EW999_RS02610 () | 508089..508328 | - | 240 | WP_001211011.1 | YobH family protein | - |
| EW999_RS02615 () | 508487..508630 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| EW999_RS02620 () | 508705..508992 | + | 288 | WP_001006866.1 | YebO family protein | - |
| EW999_RS02625 () | 509661..509804 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| EW999_RS02630 () | 509817..510026 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| EW999_RS02635 () | 510192..511001 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| EW999_RS02640 () | 510998..511564 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| EW999_RS02645 () | 511993..512451 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| EW999_RS02650 () | 512506..513357 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| EW999_RS02655 () | 513370..514170 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|