MGE detailed information
MGE type: Conjugative plasmid MGE length: 90662 bp
Accession: NZ_CP035868 Location: 1..90662 Organism: Escherichia coli strain E275 a Replicon: plasmid pE275a_90
Accession: NZ_CP035868 Location: 1..90662 Organism: Escherichia coli strain E275 a Replicon: plasmid pE275a_90
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXE34_RS25885 (243) | 243..1103 | + | 861 | WP_000704511.1 | putative protein YcjY | VF |
| EXE34_RS25890 (1206) | 1206..1766 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| EXE34_RS25895 (1936) | 1936..2613 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EXE34_RS25900 (2613) | 2613..2960 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXE34_RS25905 (2980) | 2980..4551 | + | 1572 | WP_000381402.1 | IS66 family transposase ISCro1 | Transposase |
| EXE34_RS25910 (4604) | 4604..4813 | + | 210 | WP_088568712.1 | hypothetical protein | - |
| EXE34_RS25915 (5225) | 5225..5851 | + | 627 | WP_088568713.1 | NYN domain-containing protein | - |
| EXE34_RS25920 (6003) | 6003..6593 | + | 591 | WP_044311467.1 | DUF2726 domain-containing protein | - |
| EXE34_RS25925 (6833) | 6833..7081 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| EXE34_RS25930 (7328) | 7328..7402 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EXE34_RS25935 (7395) | 7395..8252 | + | 858 | WP_000131014.1 | incFII family plasmid replication initiator RepA | - |
| EXE34_RS25940 (9168) | 9168..9437 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| EXE34_RS25945 (9437) | 9437..9715 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| EXE34_RS25950 (9761) | 9761..10609 | + | 849 | WP_042815954.1 | 3'-5' exonuclease | - |
| EXE34_RS25955 (10750) | 10750..11208 | + | 459 | WP_253207950.1 | hypothetical protein | - |
| EXE34_RS25960 (11434) | 11434..12456 | + | 1023 | WP_159387386.1 | IS21 family transposase IS100kyp | Transposase |
| EXE34_RS25965 (12453) | 12453..13235 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| EXE34_RS25970 (13464) | 13464..13640 | + | 177 | Protein_18 | transposase domain-containing protein | - |
| EXE34_RS26790 (13674) | 13674..13828 | - | 155 | Protein_19 | transposase | - |
| EXE34_RS25980 (13823) | 13823..14074 | - | 252 | Protein_20 | IS66 family transposase IS682 | Transposase |
| EXE34_RS26795 (14071) | 14071..14229 | - | 159 | WP_235835353.1 | hypothetical protein | - |
| EXE34_RS25990 (14577) | 14577..14726 | - | 150 | Protein_22 | IS3 family transposase ISKpn37 | Transposase |
| EXE34_RS25995 (15234) | 15234..15452 | + | 219 | WP_071778586.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| EXE34_RS26000 (15747) | 15747..16163 | + | 417 | Protein_24 | IS66 family transposase ISCro1 | Transposase |
| EXE34_RS26005 (16224) | 16224..17285 | - | 1062 | Protein_25 | IS21 family transposase ISSso4 | Transposase |
| EXE34_RS26010 (17586) | 17586..18077 | - | 492 | Protein_26 | IS91 family transposase ISSbo1 | Transposase |
| EXE34_RS26015 (18058) | 18058..18330 | - | 273 | WP_042815951.1 | hypothetical protein | - |
| EXE34_RS26020 (18647) | 18647..19423 | + | 777 | WP_071778579.1 | Heat-labile enterotoxin A chain | VF |
| EXE34_RS26025 (19420) | 19420..19794 | + | 375 | WP_012846869.1 | Heat-labile enterotoxin B chain | VF |
| EXE34_RS26030 (20136) | 20136..20279 | - | 144 | Protein_30 | integrase core domain-containing protein | - |
| EXE34_RS26040 (21599) | 21599..22180 | - | 582 | Protein_32 | IS3 family transposase IS2 | Transposase |
| EXE34_RS26045 (22188) | 22188..22472 | + | 285 | Protein_33 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | VF |
| EXE34_RS26050 (22423) | 22423..23022 | + | 600 | WP_181032115.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | VF |
| EXE34_RS26055 (23022) | 23022..23804 | + | 783 | WP_253207955.1 | YaiO family outer membrane beta-barrel protein | - |
| EXE34_RS26060 (24342) | 24342..25274 | - | 933 | WP_253207951.1 | CFA/I fimbrial subunit D | VF |
| EXE34_RS26065 (25390) | 25390..25980 | + | 591 | WP_159382624.1 | Type-1 fimbrial protein, A chain | VF |
| EXE34_RS26070 (26046) | 26046..26747 | + | 702 | WP_159382623.1 | putative fimbrial chaperone LpfB | VF |
| EXE34_RS26075 (26791) | 26791..27159 | + | 369 | WP_253207952.1 | fimbria/pilus periplasmic chaperone | - |
| EXE34_RS26080 (27233) | 27233..29740 | + | 2508 | WP_159382621.1 | Outer membrane usher protein FimD | VF |
| EXE34_RS26085 (29737) | 29737..30144 | + | 408 | WP_235837084.1 | fimbria/pilus periplasmic chaperone | - |
| EXE34_RS26090 (30170) | 30170..30718 | + | 549 | WP_235837085.1 | fimbrial protein | - |
| EXE34_RS26095 (30764) | 30764..32014 | + | 1251 | WP_159382620.1 | FasG | - |
| EXE34_RS26100 (32119) | 32119..32352 | + | 234 | Protein_44 | IS3 family transposase ISKpn37 | Transposase |
| EXE34_RS26105 (32418) | 32418..33095 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EXE34_RS26110 (33095) | 33095..33442 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXE34_RS26115 (33462) | 33462..35033 | + | 1572 | WP_000381402.1 | IS66 family transposase ISCro1 | Transposase |
| EXE34_RS26120 (35088) | 35088..36499 | - | 1412 | Protein_48 | ISKra4 family transposase ISEc51 | Transposase |
| EXE34_RS26125 (36534) | 36534..37106 | - | 573 | WP_159382612.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| EXE34_RS26130 (37242) | 37242..37787 | - | 546 | WP_253207953.1 | plasmid pRiA4b ORF-3 family protein | - |
| EXE34_RS26135 (38148) | 38148..39008 | - | 861 | WP_088568728.1 | Right origin-binding protein | VF |
| EXE34_RS26140 (39694) | 39694..39786 | - | 93 | Protein_52 | ANR family transcriptional regulator | - |
| EXE34_RS26145 (39985) | 39985..40782 | + | 798 | WP_088568729.1 | CFA/I fimbrial subunit D | VF |
| EXE34_RS26150 (41196) | 41196..41607 | + | 412 | Protein_54 | IS3 family transposase ISKpn37 | Transposase |
| EXE34_RS26155 (41603) | 41603..42322 | + | 720 | Protein_55 | IS21 family transposase IS21 | Transposase |
| EXE34_RS26160 (42322) | 42322..42786 | + | 465 | Protein_56 | IS21 family transposase IS21 | Transposase |
| EXE34_RS26165 (42815) | 42815..43054 | - | 240 | Protein_57 | transposase domain-containing protein | - |
| EXE34_RS26170 (43238) | 43238..43561 | + | 324 | WP_253207954.1 | IS66 family transposase ISEc23 | Transposase |
| EXE34_RS26175 (43558) | 43558..43695 | + | 138 | Protein_59 | IS66 family transposase IS682 | Transposase |
| EXE34_RS26180 (43899) | 43899..44879 | + | 981 | WP_042815943.1 | plasmid segregation protein ParM | - |
| EXE34_RS26185 (44882) | 44882..45304 | + | 423 | WP_001297831.1 | plasmid partitioning/stability family protein | - |
| EXE34_RS26190 (45308) | 45308..45613 | + | 306 | WP_159382613.1 | hypothetical protein | - |
| EXE34_RS26195 (45709) | 45709..45903 | + | 195 | Protein_63 | hypothetical protein | - |
| EXE34_RS26200 (45949) | 45949..46512 | + | 564 | WP_001297832.1 | class I SAM-dependent methyltransferase | - |
| EXE34_RS26205 (46598) | 46598..47037 | - | 440 | Protein_65 | hypothetical protein | - |
| EXE34_RS26210 (47991) | 47991..49892 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| EXE34_RS26215 (50087) | 50087..51454 | + | 1368 | WP_253207949.1 | single-stranded DNA-binding protein | - |
| EXE34_RS26220 (51509) | 51509..51943 | + | 435 | WP_001297769.1 | conjugation system SOS inhibitor PsiB | - |
| EXE34_RS26225 (51940) | 51940..52659 | + | 720 | WP_001297770.1 | plasmid SOS inhibition protein A | - |
| EXE34_RS26230 (52656) | 52656..52970 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - (52919) | 52919..53132 | + | 214 | NuclAT_0 | - | - |
| - (52919) | 52919..53132 | + | 214 | NuclAT_0 | - | - |
| - (52919) | 52919..53132 | + | 214 | NuclAT_0 | - | - |
| - (52919) | 52919..53132 | + | 214 | NuclAT_0 | - | - |
| - (52922) | 52922..53132 | - | 211 | NuclAT_0 | - | - |
| EXE34_RS26800 (53120) | 53120..53272 | + | 153 | Protein_71 | FlmC family protein | - |
| EXE34_RS26235 (53220) | 53220..53339 | + | 120 | WP_228769536.1 | Hok/Gef family protein | - |
| EXE34_RS26240 (53793) | 53793..53990 | - | 198 | Protein_73 | hypothetical protein | - |
| EXE34_RS26245 (53992) | 53992..54278 | + | 287 | Protein_74 | hypothetical protein | - |
| EXE34_RS26250 (54397) | 54397..55218 | + | 822 | WP_159382556.1 | DUF932 domain-containing protein | - |
| EXE34_RS26255 (55514) | 55514..56011 | - | 498 | WP_032315912.1 | hypothetical protein | VF |
| EXE34_RS26260 (56439) | 56439..56822 | + | 384 | WP_159382555.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EXE34_RS26265 (57016) | 57016..57687 | + | 672 | WP_000283565.1 | conjugal transfer transcriptional regulator TraJ | - |
| EXE34_RS26270 (57824) | 57824..58051 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| EXE34_RS26275 (58084) | 58084..58449 | + | 366 | WP_001099002.1 | type IV conjugative transfer system pilin TraA | - |
| EXE34_RS26280 (58464) | 58464..58775 | + | 312 | WP_000012116.1 | type IV conjugative transfer system protein TraL | - |
| EXE34_RS26285 (58797) | 58797..59363 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| EXE34_RS26290 (59350) | 59350..60078 | + | 729 | WP_001297772.1 | type-F conjugative transfer system secretin TraK | - |
| EXE34_RS26295 (60078) | 60078..61529 | + | 1452 | WP_000146637.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| EXE34_RS26300 (61519) | 61519..62089 | + | 571 | Protein_85 | conjugal transfer protein TraP | - |
| EXE34_RS26305 (62076) | 62076..62396 | + | 321 | WP_001057295.1 | conjugal transfer protein TrbD | - |
| EXE34_RS26310 (62389) | 62389..62640 | + | 252 | WP_159382554.1 | conjugal transfer protein TrbG | - |
| EXE34_RS26315 (62637) | 62637..63152 | + | 516 | WP_000809905.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EXE34_RS26320 (63287) | 63287..63508 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| EXE34_RS26325 (63501) | 63501..63860 | + | 360 | Protein_90 | hypothetical protein | - |
| EXE34_RS26330 (63919) | 63919..66549 | + | 2631 | WP_001297499.1 | type IV secretion system protein TraC | - |
| EXE34_RS26335 (66546) | 66546..66932 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| EXE34_RS26340 (66929) | 66929..67561 | + | 633 | WP_001297504.1 | type-F conjugative transfer system protein TraW | - |
| EXE34_RS26345 (67558) | 67558..68550 | + | 993 | WP_000830189.1 | conjugal transfer pilus assembly protein TraU | - |
| EXE34_RS26350 (68577) | 68577..68885 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| EXE34_RS26355 (69494) | 69494..69583 | + | 90 | Protein_96 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EXE34_RS26360 (69675) | 69675..69854 | + | 180 | WP_001750891.1 | hypothetical protein | - |
| EXE34_RS26365 (69851) | 69851..70090 | - | 240 | WP_159382552.1 | hypothetical protein | - |
| EXE34_RS26370 (70283) | 70283..70921 | + | 639 | WP_159382551.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EXE34_RS26375 (70918) | 70918..71289 | + | 372 | WP_159382550.1 | hypothetical protein | - |
| EXE34_RS26380 (71314) | 71314..71736 | + | 423 | WP_001297512.1 | HNH endonuclease signature motif containing protein | - |
| EXE34_RS26385 (71733) | 71733..73541 | + | 1809 | WP_159382549.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EXE34_RS26390 (73568) | 73568..73825 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| EXE34_RS26395 (73818) | 73818..74561 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EXE34_RS26400 (74731) | 74731..74967 | + | 237 | WP_000270011.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EXE34_RS26405 (74954) | 74954..75499 | + | 546 | WP_001297498.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EXE34_RS26410 (75489) | 75489..75803 | + | 315 | WP_001353640.1 | P-type conjugative transfer protein TrbJ | - |
| EXE34_RS26415 (75757) | 75757..76149 | + | 393 | WP_000138372.1 | F-type conjugal transfer protein TrbF | - |
| EXE34_RS26420 (76136) | 76136..77509 | + | 1374 | WP_159382548.1 | conjugal transfer pilus assembly protein TraH | - |
| EXE34_RS26425 (77506) | 77506..80352 | + | 2847 | WP_159382547.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| EXE34_RS26430 (80349) | 80349..80858 | + | 510 | WP_159382546.1 | conjugal transfer entry exclusion protein TraS | - |
| EXE34_RS26435 (80893) | 80893..81603 | + | 711 | WP_045227890.1 | conjugal transfer complement resistance protein TraT | - |
| EXE34_RS26440 (81806) | 81806..82543 | + | 738 | WP_159382545.1 | hypothetical protein | - |
| EXE34_RS26445 (82594) | 82594..84810 | + | 2217 | WP_216285029.1 | type IV conjugative transfer system coupling protein TraD | - |
| EXE34_RS26450 (84810) | 84810..90080 | + | 5271 | WP_159382544.1 | Multifunctional conjugation protein TraI | Relaxase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|