MGE detailed information
MGE type: Prophage MGE length: 94419 bp
Accession: NZ_CP035865 Location: 2276436..2370854 Organism: Escherichia coli strain E275 a Replicon: chromosome
Accession: NZ_CP035865 Location: 2276436..2370854 Organism: Escherichia coli strain E275 a Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXE34_RS10995 (2271754) | 2271754..2272188 | + | 435 | WP_001300461.1 | universal stress protein UspF | - |
| EXE34_RS11000 (2272774) | 2272774..2273688 | + | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| EXE34_RS11005 (2273688) | 2273688..2274515 | + | 828 | WP_000983721.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| EXE34_RS11010 (2274512) | 2274512..2275369 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| EXE34_RS11015 (2275366) | 2275366..2276223 | + | 858 | WP_000968131.1 | iron/manganese ABC transporter permease subunit SitD | - |
| EXE34_RS11020 (2276436) | 2276436..2277020 | - | 585 | WP_071686010.1 | tail fiber assembly protein | - |
| EXE34_RS11025 (2277020) | 2277020..2280043 | - | 3024 | WP_071686011.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EXE34_RS11030 (2280108) | 2280108..2280707 | - | 600 | WP_001230352.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| EXE34_RS11035 (2280774) | 2280774..2284172 | - | 3399 | WP_176257578.1 | host specificity protein J | - |
| EXE34_RS11040 (2284233) | 2284233..2284808 | - | 576 | WP_231354053.1 | tail assembly protein | - |
| EXE34_RS11045 (2284772) | 2284772..2285515 | - | 744 | WP_105282358.1 | C40 family peptidase | - |
| EXE34_RS11050 (2285521) | 2285521..2286219 | - | 699 | WP_001152437.1 | phage minor tail protein L | - |
| EXE34_RS11055 (2286219) | 2286219..2286557 | - | 339 | WP_000024051.1 | phage tail protein | - |
| EXE34_RS11060 (2286550) | 2286550..2289783 | - | 3234 | WP_024240902.1 | phage tail tape measure protein | - |
| EXE34_RS11065 (2289949) | 2289949..2290182 | - | 234 | WP_001312809.1 | hypothetical protein | - |
| EXE34_RS11070 (2290257) | 2290257..2290616 | - | 360 | WP_012565075.1 | protein YdaY | - |
| EXE34_RS11075 (2290767) | 2290767..2291729 | - | 963 | WP_000094292.1 | phage tail tube protein | - |
| EXE34_RS11080 (2291756) | 2291756..2292148 | - | 393 | WP_000673077.1 | phage tail terminator-like protein | - |
| EXE34_RS11085 (2292145) | 2292145..2292525 | - | 381 | WP_001029819.1 | hypothetical protein | - |
| EXE34_RS11090 (2292526) | 2292526..2292909 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| EXE34_RS11095 (2292909) | 2292909..2293304 | - | 396 | WP_000634214.1 | hypothetical protein | - |
| EXE34_RS11100 (2293308) | 2293308..2293484 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| EXE34_RS11105 (2293527) | 2293527..2294666 | - | 1140 | WP_089625160.1 | P22 phage major capsid protein family protein | - |
| EXE34_RS11110 (2294765) | 2294765..2295529 | - | 765 | WP_000770042.1 | hypothetical protein | - |
| EXE34_RS11115 (2295634) | 2295634..2296746 | - | 1113 | WP_159382588.1 | phage minor head protein | - |
| EXE34_RS11120 (2296730) | 2296730..2298136 | - | 1407 | WP_089625159.1 | DUF4055 domain-containing protein | - |
| EXE34_RS11125 (2298139) | 2298139..2299440 | - | 1302 | WP_000625348.1 | terminase family protein | - |
| EXE34_RS11130 (2299421) | 2299421..2300515 | - | 1095 | WP_000089447.1 | terminase small subunit | - |
| EXE34_RS11135 (2300519) | 2300519..2300728 | - | 210 | WP_000126788.1 | hypothetical protein | - |
| EXE34_RS11140 (2300706) | 2300706..2301638 | - | 933 | WP_001204037.1 | hypothetical protein | - |
| EXE34_RS26675 (2302165) | 2302165..2302422 | - | 258 | Protein_2210 | ParB/Srx family N-terminal domain-containing protein | - |
| EXE34_RS11150 (2302560) | 2302560..2304017 | - | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| EXE34_RS11155 (2304214) | 2304214..2304399 | - | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| EXE34_RS11160 (2304616) | 2304616..2305092 | - | 477 | WP_001194112.1 | glycoside hydrolase family protein | - |
| EXE34_RS11165 (2305096) | 2305096..2305437 | - | 342 | WP_000781775.1 | phage holin, lambda family | - |
| EXE34_RS11170 (2305601) | 2305601..2305816 | + | 216 | WP_224729395.1 | hypothetical protein | - |
| EXE34_RS11175 (2305785) | 2305785..2306354 | - | 570 | WP_001208722.1 | hypothetical protein | - |
| EXE34_RS11180 (2306576) | 2306576..2307118 | - | 543 | WP_000640144.1 | DUF1133 family protein | - |
| EXE34_RS11185 (2307115) | 2307115..2307405 | - | 291 | WP_001741607.1 | DUF1364 domain-containing protein | - |
| EXE34_RS11190 (2307405) | 2307405..2308004 | - | 600 | WP_001702268.1 | DUF1367 family protein | - |
| EXE34_RS11195 (2308818) | 2308818..2309156 | + | 339 | WP_000149055.1 | DUF1971 domain-containing protein | - |
| EXE34_RS11200 (2309919) | 2309919..2310713 | - | 795 | WP_000436711.1 | SIR2 family protein | - |
| EXE34_RS11205 (2310713) | 2310713..2311267 | - | 555 | WP_001026099.1 | non-canonical purine NTP pyrophosphatase | - |
| EXE34_RS11210 (2311264) | 2311264..2312244 | - | 981 | WP_023277476.1 | adenosine deaminase | - |
| EXE34_RS11215 (2312546) | 2312546..2312992 | + | 447 | WP_000818068.1 | TetR/AcrR family transcriptional regulator | - |
| EXE34_RS11220 (2313221) | 2313221..2313643 | - | 423 | WP_089625157.1 | DUF977 family protein | - |
| EXE34_RS11225 (2313659) | 2313659..2314420 | - | 762 | WP_000450662.1 | DUF1627 domain-containing protein | - |
| EXE34_RS11230 (2314443) | 2314443..2315189 | - | 747 | WP_000788970.1 | ATP-binding protein | - |
| EXE34_RS11235 (2315196) | 2315196..2316053 | - | 858 | WP_000899748.1 | YdaU family protein | - |
| EXE34_RS11240 (2316066) | 2316066..2316488 | - | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| EXE34_RS11245 (2316511) | 2316511..2316807 | - | 297 | WP_000712069.1 | toxin YdaS | - |
| EXE34_RS11250 (2316931) | 2316931..2317407 | + | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| EXE34_RS11255 (2317861) | 2317861..2318016 | + | 156 | WP_001169151.1 | YdaF family protein | - |
| EXE34_RS11260 (2318013) | 2318013..2318501 | - | 489 | WP_159382636.1 | superinfection exclusion B family protein | - |
| EXE34_RS11265 (2318943) | 2318943..2319164 | + | 222 | WP_000560225.1 | killing protein KilR | - |
| EXE34_RS11270 (2319164) | 2319164..2319334 | + | 171 | WP_001352098.1 | YdaE family protein | - |
| EXE34_RS11275 (2319409) | 2319409..2319684 | + | 276 | WP_000632297.1 | protein RacC | - |
| EXE34_RS11280 (2319786) | 2319786..2322386 | + | 2601 | WP_000105143.1 | exodeoxyribonuclease VIII | - |
| EXE34_RS11285 (2322379) | 2322379..2323188 | + | 810 | WP_000166319.1 | recombination protein RecT | - |
| EXE34_RS11290 (2323245) | 2323245..2323439 | + | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| - (2323438) | 2323438..2323616 | - | 179 | NuclAT_0 | - | - |
| - (2323438) | 2323438..2323616 | - | 179 | NuclAT_0 | - | - |
| - (2323438) | 2323438..2323616 | - | 179 | NuclAT_0 | - | - |
| - (2323438) | 2323438..2323616 | - | 179 | NuclAT_0 | - | - |
| EXE34_RS11295 (2323432) | 2323432..2323641 | + | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| EXE34_RS11300 (2323720) | 2323720..2323935 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| EXE34_RS11305 (2323937) | 2323937..2325172 | + | 1236 | WP_000040852.1 | site-specific integrase | - |
| EXE34_RS26680 (2325540) | 2325540..2325662 | - | 123 | Protein_2243 | DUF4376 domain-containing protein | - |
| EXE34_RS11310 (2325653) | 2325653..2327479 | - | 1827 | WP_159382640.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EXE34_RS11315 (2327651) | 2327651..2328328 | + | 678 | WP_001339397.1 | IS66-like element accessory protein TnpA | - |
| EXE34_RS11320 (2328328) | 2328328..2328675 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EXE34_RS11325 (2328695) | 2328695..2330266 | + | 1572 | WP_000381402.1 | IS66-like element ISCro1 family transposase | - |
| EXE34_RS11330 (2330187) | 2330187..2331311 | - | 1125 | WP_253207946.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| EXE34_RS11335 (2331302) | 2331302..2331520 | - | 219 | WP_033813283.1 | tail protein X | - |
| EXE34_RS11340 (2331495) | 2331495..2331983 | - | 489 | WP_000228000.1 | phage tail protein | - |
| EXE34_RS11345 (2331986) | 2331986..2333638 | - | 1653 | WP_159382583.1 | hypothetical protein | - |
| EXE34_RS11350 (2333756) | 2333756..2334058 | - | 303 | WP_001291422.1 | phage tail assembly protein | - |
| EXE34_RS11355 (2334118) | 2334118..2334636 | - | 519 | WP_000988219.1 | phage major tail tube protein | - |
| EXE34_RS11360 (2334633) | 2334633..2336108 | - | 1476 | WP_112039776.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| EXE34_RS11365 (2336163) | 2336163..2336708 | - | 546 | WP_000972182.1 | tail fiber assembly protein | - |
| EXE34_RS11370 (2336711) | 2336711..2338093 | - | 1383 | WP_159382584.1 | phage tail protein | - |
| EXE34_RS11375 (2338090) | 2338090..2338680 | - | 591 | WP_096095869.1 | phage tail protein I | - |
| EXE34_RS11380 (2338673) | 2338673..2339587 | - | 915 | WP_112026721.1 | baseplate J/gp47 family protein | - |
| EXE34_RS11385 (2339562) | 2339562..2339918 | - | 357 | WP_000579231.1 | GPW/gp25 family protein | - |
| EXE34_RS11390 (2339952) | 2339952..2340575 | - | 624 | WP_000049992.1 | phage baseplate assembly protein V | - |
| EXE34_RS11395 (2340559) | 2340559..2341110 | - | 552 | WP_136768506.1 | hypothetical protein | - |
| EXE34_RS11400 (2341122) | 2341122..2341844 | - | 723 | WP_096095872.1 | hypothetical protein | - |
| EXE34_RS11405 (2341825) | 2341825..2342226 | - | 402 | WP_032083604.1 | head-tail joining protein | - |
| EXE34_RS11410 (2342229) | 2342229..2342594 | - | 366 | WP_001372342.1 | DNA-packaging protein FI | - |
| EXE34_RS11415 (2342645) | 2342645..2343673 | - | 1029 | WP_032083605.1 | major capsid protein | - |
| EXE34_RS11420 (2343743) | 2343743..2344078 | - | 336 | WP_032083606.1 | head decoration protein | - |
| EXE34_RS11425 (2344118) | 2344118..2345734 | - | 1617 | WP_159382585.1 | S49 family peptidase | - |
| EXE34_RS11430 (2345724) | 2345724..2347247 | - | 1524 | WP_097450122.1 | phage portal protein | - |
| EXE34_RS11435 (2347292) | 2347292..2347501 | - | 210 | WP_000263126.1 | gpW family head-tail joining protein | - |
| EXE34_RS11440 (2347505) | 2347505..2349421 | - | 1917 | WP_159382586.1 | phage terminase large subunit family protein | - |
| EXE34_RS11445 (2349393) | 2349393..2349941 | - | 549 | WP_032083611.1 | terminase small subunit | - |
| EXE34_RS11450 (2350930) | 2350930..2351307 | - | 378 | WP_089551966.1 | M15 family metallopeptidase | - |
| EXE34_RS11455 (2351310) | 2351310..2351585 | - | 276 | WP_159382587.1 | phage holin family protein | - |
| EXE34_RS11460 (2351575) | 2351575..2351967 | - | 393 | WP_001297664.1 | putative holin | - |
| EXE34_RS11465 (2352054) | 2352054..2352206 | - | 153 | WP_000833653.1 | DUF3927 family protein | - |
| EXE34_RS11470 (2352203) | 2352203..2352629 | - | 427 | Protein_2276 | tellurite/colicin resistance protein | - |
| EXE34_RS11485 (2353709) | 2353709..2354251 | - | 543 | WP_001594017.1 | DUF1133 family protein | - |
| EXE34_RS11490 (2354248) | 2354248..2354538 | - | 291 | WP_001594016.1 | DUF1364 domain-containing protein | - |
| EXE34_RS11495 (2354538) | 2354538..2355137 | - | 600 | WP_001594015.1 | DUF1367 family protein | - |
| EXE34_RS11500 (2355604) | 2355604..2355759 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EXE34_RS11505 (2356316) | 2356316..2357413 | + | 1098 | WP_001594014.1 | beta family protein | - |
| EXE34_RS11510 (2357379) | 2357379..2357951 | - | 573 | WP_001204665.1 | sce7726 family protein | - |
| EXE34_RS11515 (2358257) | 2358257..2358568 | - | 312 | WP_001353219.1 | hypothetical protein | - |
| EXE34_RS11520 (2358561) | 2358561..2358815 | - | 255 | WP_000004329.1 | hypothetical protein | - |
| EXE34_RS11525 (2358812) | 2358812..2359234 | - | 423 | WP_001151114.1 | DUF977 family protein | - |
| EXE34_RS11530 (2359250) | 2359250..2360011 | - | 762 | WP_001594011.1 | DUF1627 domain-containing protein | - |
| EXE34_RS11535 (2360046) | 2360046..2360507 | - | 462 | WP_001687463.1 | replication protein P | - |
| EXE34_RS11540 (2360500) | 2360500..2361408 | - | 909 | WP_159382637.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| EXE34_RS11545 (2361918) | 2361918..2362331 | - | 414 | WP_000695003.1 | hypothetical protein | - |
| EXE34_RS11550 (2362351) | 2362351..2362773 | - | 423 | WP_001594005.1 | toxin YdaT family protein | - |
| EXE34_RS11555 (2362770) | 2362770..2363024 | - | 255 | WP_001072340.1 | hypothetical protein | - |
| EXE34_RS11560 (2363104) | 2363104..2363523 | + | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| EXE34_RS11565 (2363956) | 2363956..2364108 | + | 153 | WP_001594003.1 | DUF1391 family protein | - |
| EXE34_RS11570 (2364529) | 2364529..2364750 | + | 222 | WP_000560220.1 | killing protein KilR | - |
| EXE34_RS11575 (2364744) | 2364744..2364920 | + | 177 | WP_001594002.1 | YdaE family protein | - |
| EXE34_RS11580 (2364995) | 2364995..2365270 | + | 276 | WP_001594001.1 | phage protein | - |
| EXE34_RS11585 (2365369) | 2365369..2368044 | + | 2676 | WP_001718192.1 | exodeoxyribonuclease VIII | - |
| EXE34_RS11590 (2368037) | 2368037..2368870 | + | 834 | WP_000166322.1 | recombination protein RecT | - |
| EXE34_RS11595 (2368927) | 2368927..2369121 | + | 195 | WP_072130784.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| - (2369120) | 2369120..2369298 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (2369120) | 2369120..2369298 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (2369120) | 2369120..2369298 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| - (2369120) | 2369120..2369298 | - | 179 | NuclAT_1 | - | Antitoxin Detail |
| EXE34_RS11600 (2369114) | 2369114..2369302 | + | 189 | WP_216284996.1 | DUF1187 family protein | - |
| EXE34_RS11605 (2369402) | 2369402..2369617 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| EXE34_RS11610 (2369619) | 2369619..2370854 | + | 1236 | WP_001593997.1 | site-specific integrase | - |
| EXE34_RS11615 (2370906) | 2370906..2371841 | + | 936 | WP_001157376.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EXE34_RS11620 (2371970) | 2371970..2373343 | - | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| EXE34_RS11625 (2373821) | 2373821..2374804 | - | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| EXE34_RS11630 (2374818) | 2374818..2374865 | - | 48 | WP_211180494.1 | protein YnaN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|