MGE detailed information
MGE type: Conjugative plasmid MGE length: 81910 bp
Accession: NZ_CP035858 Location: 1..81910 Organism: Escherichia coli TW11681 Replicon: plasmid pTW11681_81
Accession: NZ_CP035858 Location: 1..81910 Organism: Escherichia coli TW11681 Replicon: plasmid pTW11681_81
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXE31_RS25045 (416) | 416..1126 | + | 711 | WP_000954086.1 | Toxin coregulated pilin | VF |
| EXE31_RS25050 (1188) | 1188..2759 | + | 1572 | WP_000783967.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| EXE31_RS25055 (2778) | 2778..3191 | + | 414 | WP_001201934.1 | TcpQ domain-containing protein | - |
| EXE31_RS25060 (3209) | 3209..4666 | + | 1458 | WP_000768354.1 | hypothetical protein | - |
| EXE31_RS25065 (4669) | 4669..5229 | + | 561 | WP_001047585.1 | type IV pilus Longus assembly protein LngE | - |
| EXE31_RS25070 (5231) | 5231..6058 | + | 828 | WP_001054274.1 | hypothetical protein | - |
| EXE31_RS25075 (6046) | 6046..6531 | + | 486 | WP_000336151.1 | type IV pilus Longus-associated protein LngG | - |
| EXE31_RS25080 (6729) | 6729..8063 | + | 1335 | WP_001380305.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| EXE31_RS25085 (8047) | 8047..9072 | + | 1026 | WP_000714367.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EXE31_RS25090 (9087) | 9087..10208 | + | 1122 | WP_000857355.1 | hypothetical protein | - |
| EXE31_RS25095 (10211) | 10211..11065 | + | 855 | WP_000289148.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| EXE31_RS25100 (11282) | 11282..11854 | - | 573 | WP_000723074.1 | hypothetical protein | - |
| EXE31_RS25105 (12180) | 12180..12590 | - | 411 | Protein_13 | Tn3 family transposase ISEc63 | Transposase |
| EXE31_RS25110 (12783) | 12783..13001 | + | 219 | WP_077628640.1 | hypothetical protein | - |
| EXE31_RS25115 (13001) | 13001..13585 | + | 585 | WP_000194583.1 | hypothetical protein | - |
| EXE31_RS25120 (13850) | 13850..15406 | + | 1557 | WP_000818361.1 | AAA family ATPase | - |
| EXE31_RS25125 (15601) | 15601..16218 | + | 618 | WP_000521602.1 | ProQ/FINO family protein | - |
| EXE31_RS26185 (16277) | 16277..17068 | - | 792 | WP_000202509.1 | hypothetical protein | - |
| EXE31_RS25140 (17079) | 17079..18307 | + | 1229 | WP_085959875.1 | IS3 family transposase IS2 | Transposase |
| EXE31_RS25145 (19283) | 19283..20140 | - | 858 | WP_000131013.1 | incFII family plasmid replication initiator RepA | - |
| EXE31_RS26190 (20159) | 20159..20338 | - | 180 | Protein_21 | protein CopA/IncA | - |
| EXE31_RS25155 (20441) | 20441..20698 | - | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| EXE31_RS25160 (20938) | 20938..21528 | - | 591 | WP_000766798.1 | DUF2726 domain-containing protein | - |
| EXE31_RS25165 (21566) | 21566..21775 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| EXE31_RS25170 (21821) | 21821..22102 | - | 282 | Protein_25 | thermonuclease family protein | - |
| EXE31_RS25175 (22156) | 22156..22833 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS25180 (22833) | 22833..23180 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS25185 (23200) | 23200..24771 | + | 1572 | WP_001748001.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS25190 (24803) | 24803..26836 | + | 2034 | Protein_29 | type IV conjugative transfer system coupling protein TraD | - |
| EXE31_RS25195 (26845) | 26845..27243 | - | 399 | WP_000911313.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EXE31_RS25200 (27243) | 27243..27470 | - | 228 | WP_000450520.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| EXE31_RS25205 (27552) | 27552..32822 | + | 5271 | WP_000987016.1 | Multifunctional conjugation protein TraI | Relaxase |
| EXE31_RS25210 (32842) | 32842..33588 | + | 747 | WP_000205749.1 | conjugal transfer pilus acetylase TraX | - |
| EXE31_RS25215 (33647) | 33647..34507 | + | 861 | WP_000704515.1 | alpha/beta hydrolase | - |
| EXE31_RS25220 (34610) | 34610..35170 | + | 561 | WP_000840466.1 | fertility inhibition protein FinO | - |
| EXE31_RS25225 (35303) | 35303..35515 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| EXE31_RS25230 (35760) | 35760..35948 | + | 189 | Protein_37 | endonuclease | - |
| EXE31_RS25235 (35978) | 35978..37549 | - | 1572 | WP_001748001.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS25240 (37569) | 37569..37916 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS25245 (37916) | 37916..38593 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS25250 (38648) | 38648..38773 | - | 126 | Protein_41 | conjugal transfer protein TraD | - |
| EXE31_RS25255 (39026) | 39026..39736 | - | 711 | WP_042032882.1 | conjugal transfer complement resistance protein TraT | - |
| EXE31_RS25260 (39771) | 39771..40280 | - | 510 | WP_000628096.1 | conjugal transfer entry exclusion protein TraS | - |
| EXE31_RS25265 (40277) | 40277..43102 | - | 2826 | WP_001007019.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| EXE31_RS25270 (43099) | 43099..44472 | - | 1374 | WP_000944320.1 | conjugal transfer pilus assembly protein TraH | - |
| EXE31_RS26195 (44459) | 44459..44851 | - | 393 | Protein_46 | F-type conjugal transfer protein TrbF | - |
| EXE31_RS25275 (44838) | 44838..45179 | - | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| EXE31_RS25280 (45109) | 45109..45387 | - | 279 | Protein_48 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EXE31_RS25285 (45381) | 45381..46340 | - | 960 | WP_000830182.1 | conjugal transfer pilus assembly protein TraU | - |
| EXE31_RS25290 (46337) | 46337..46969 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| EXE31_RS25295 (46966) | 46966..47352 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| EXE31_RS25300 (47349) | 47349..48278 | - | 930 | Protein_52 | hypothetical protein | - |
| EXE31_RS25305 (48455) | 48455..49183 | - | 729 | Protein_53 | type-F conjugative transfer system secretin TraK | - |
| EXE31_RS25310 (49170) | 49170..49736 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| EXE31_RS25315 (49758) | 49758..50069 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| EXE31_RS25320 (50084) | 50084..50449 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| EXE31_RS25325 (50483) | 50483..50710 | - | 228 | WP_016255765.1 | conjugal transfer relaxosome protein TraY | - |
| EXE31_RS25330 (50830) | 50830..51477 | - | 648 | WP_000332529.1 | transcriptional regulator TraJ family protein | - |
| EXE31_RS25335 (51669) | 51669..52052 | - | 384 | WP_001151531.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EXE31_RS25340 (52328) | 52328..52975 | + | 648 | WP_000601036.1 | hypothetical protein | VF |
| EXE31_RS25345 (53308) | 53308..54093 | - | 786 | WP_159379700.1 | DUF932 domain-containing protein | - |
| EXE31_RS25350 (54205) | 54205..54501 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| EXE31_RS25355 (54798) | 54798..55047 | + | 250 | Protein_63 | hypothetical protein | - |
| EXE31_RS25360 (55348) | 55348..55467 | - | 120 | WP_229484968.1 | Hok/Gef family protein | - |
| EXE31_RS26200 (55415) | 55415..55528 | - | 114 | Protein_65 | DUF5431 family protein | - |
| - (55562) | 55562..55761 | - | 200 | NuclAT_0 | - | - |
| - (55562) | 55562..55761 | - | 200 | NuclAT_0 | - | - |
| - (55562) | 55562..55761 | - | 200 | NuclAT_0 | - | - |
| - (55562) | 55562..55761 | - | 200 | NuclAT_0 | - | - |
| EXE31_RS25365 (55718) | 55718..56032 | - | 315 | WP_000872086.1 | hypothetical protein | - |
| EXE31_RS25370 (56029) | 56029..56748 | - | 720 | WP_001379993.1 | plasmid SOS inhibition protein A | - |
| EXE31_RS25375 (56745) | 56745..57179 | - | 435 | WP_000845954.1 | conjugation system SOS inhibitor PsiB | - |
| EXE31_RS25380 (57234) | 57234..59195 | - | 1962 | WP_032187061.1 | ParB/RepB/Spo0J family partition protein | - |
| EXE31_RS25385 (59233) | 59233..60446 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| EXE31_RS25390 (60488) | 60488..60856 | + | 369 | Protein_71 | DUF4113 domain-containing protein | - |
| EXE31_RS25395 (60861) | 60861..61253 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| EXE31_RS25400 (61258) | 61258..62229 | - | 972 | WP_001103691.1 | plasmid segregation protein ParM | - |
| EXE31_RS25405 (62458) | 62458..63102 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| EXE31_RS25410 (63096) | 63096..63371 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| EXE31_RS25415 (63509) | 63509..64300 | - | 792 | WP_000016495.1 | site-specific integrase | - |
| EXE31_RS25420 (64297) | 64297..64986 | - | 690 | WP_000796232.1 | hypothetical protein | - |
| EXE31_RS25425 (64979) | 64979..65248 | - | 270 | WP_001168933.1 | hypothetical protein | - |
| EXE31_RS25430 (66032) | 66032..67027 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| EXE31_RS25435 (67070) | 67070..67963 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| EXE31_RS25440 (68415) | 68415..69628 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
| EXE31_RS25445 (69874) | 69874..70896 | + | 1023 | WP_001295213.1 | IS21 family transposase IS100kyp | Transposase |
| EXE31_RS25450 (70893) | 70893..71675 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| EXE31_RS25455 (72168) | 72168..72863 | + | 696 | WP_072147603.1 | DNA-binding protein | - |
| EXE31_RS25460 (72860) | 72860..73480 | + | 621 | WP_001307044.1 | hypothetical protein | - |
| EXE31_RS26205 (73477) | 73477..73668 | + | 192 | Protein_86 | hypothetical protein | - |
| EXE31_RS25465 (73684) | 73684..74265 | + | 582 | WP_235837045.1 | DUF2971 domain-containing protein | - |
| EXE31_RS25470 (74301) | 74301..75041 | + | 741 | WP_000933099.1 | abortive infection family protein | - |
| EXE31_RS25475 (75200) | 75200..76172 | - | 973 | Protein_89 | hypothetical protein | - |
| EXE31_RS25480 (76928) | 76928..77905 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| EXE31_RS25485 (78184) | 78184..78924 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| EXE31_RS25490 (79045) | 79045..79173 | - | 129 | Protein_92 | serine/threonine protein kinase | - |
| EXE31_RS25495 (80117) | 80117..80422 | + | 306 | WP_000336590.1 | Major pilu subunit operon regulatory protein PapB | VF |
| EXE31_RS25500 (80674) | 80674..81570 | + | 897 | WP_000017442.1 | transcriptional regulator HilD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|