MGE detailed information
MGE type: Prophage MGE length: 42749 bp
Accession: NZ_CP035855 Location: 1191041..1233789 Organism: Escherichia coli TW11681 Replicon: chromosome
Accession: NZ_CP035855 Location: 1191041..1233789 Organism: Escherichia coli TW11681 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXE31_RS05835 (1187555) | 1187555..1188301 | + | 747 | WP_001295663.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EXE31_RS05840 (1188390) | 1188390..1189076 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| EXE31_RS05845 (1189253) | 1189253..1189456 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EXE31_RS05850 (1189492) | 1189492..1190952 | - | 1461 | WP_000527780.1 | mannitol dehydrogenase family protein | - |
| EXE31_RS05855 (1191041) | 1191041..1192324 | - | 1284 | Protein_1148 | MHS family MFS transporter YdfJ | - |
| EXE31_RS05865 (1194264) | 1194264..1194377 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| EXE31_RS05870 (1194446) | 1194446..1194679 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EXE31_RS05875 (1194996) | 1194996..1195586 | + | 591 | WP_000086530.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EXE31_RS05880 (1195684) | 1195684..1195806 | - | 123 | Protein_1153 | tail fiber assembly protein | - |
| EXE31_RS05885 (1195858) | 1195858..1199142 | - | 3285 | WP_000279079.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EXE31_RS05890 (1199207) | 1199207..1199791 | - | 585 | WP_029379692.1 | Outer membrane protein X | VF |
| EXE31_RS05895 (1199755) | 1199755..1200009 | - | 255 | Protein_1156 | DUF1441 family protein | - |
| EXE31_RS05900 (1200089) | 1200089..1200766 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS05905 (1200766) | 1200766..1201113 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS05910 (1201133) | 1201133..1202704 | + | 1572 | WP_001748001.1 | IS66 family transposase ISCro1 | Transposase |
| EXE31_RS05915 (1203289) | 1203289..1203495 | - | 207 | WP_001031431.1 | hypothetical protein | - |
| EXE31_RS05920 (1203796) | 1203796..1204227 | + | 432 | WP_000035576.1 | DUF1398 domain-containing protein | - |
| EXE31_RS05925 (1204379) | 1204379..1204552 | - | 174 | WP_001019139.1 | addiction module toxin, GnsA/GnsB family | - |
| EXE31_RS05930 (1204724) | 1204724..1204879 | - | 156 | WP_001309517.1 | protein YnfN | - |
| EXE31_RS05935 (1204959) | 1204959..1205024 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| EXE31_RS05940 (1205027) | 1205027..1205215 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EXE31_RS05945 (1205226) | 1205226..1205438 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EXE31_RS05950 (1205800) | 1205800..1206297 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EXE31_RS05955 (1206294) | 1206294..1206827 | - | 534 | WP_001092971.1 | lysozyme | - |
| EXE31_RS05960 (1206824) | 1206824..1207135 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EXE31_RS05965 (1207140) | 1207140..1207355 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EXE31_RS05970 (1207575) | 1207575..1207745 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EXE31_RS05975 (1208109) | 1208109..1208324 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EXE31_RS05980 (1208625) | 1208625..1208837 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EXE31_RS05985 (1208892) | 1208892..1208981 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EXE31_RS05990 (1209259) | 1209259..1210011 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EXE31_RS05995 (1210025) | 1210025..1211074 | - | 1050 | WP_001265200.1 | DUF968 domain-containing protein | - |
| EXE31_RS06000 (1211076) | 1211076..1211354 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EXE31_RS06005 (1211421) | 1211421..1211672 | - | 252 | WP_000980994.1 | protein Rem | - |
| EXE31_RS06010 (1211889) | 1211889..1212044 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EXE31_RS06015 (1212116) | 1212116..1212403 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EXE31_RS06020 (1212403) | 1212403..1212642 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EXE31_RS06025 (1212667) | 1212667..1212876 | + | 210 | Protein_1182 | hypothetical protein | - |
| EXE31_RS06030 (1212875) | 1212875..1212946 | - | 72 | Protein_1183 | transcriptional regulator | - |
| EXE31_RS06035 (1212998) | 1212998..1214211 | + | 1214 | WP_164544915.1 | IS3 family transposase IS629 | Transposase |
| EXE31_RS06040 (1214254) | 1214254..1214316 | - | 63 | Protein_1185 | dicB transcriptional regulator DicC | - |
| EXE31_RS06045 (1214400) | 1214400..1214807 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EXE31_RS06050 (1214974) | 1214974..1215129 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EXE31_RS06055 (1215131) | 1215131..1215706 | + | 576 | WP_000344953.1 | hypothetical protein | - |
| EXE31_RS06060 (1216193) | 1216193..1216381 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EXE31_RS06065 (1216378) | 1216378..1216569 | + | 192 | WP_001083278.1 | lysis protein YdfD | - |
| EXE31_RS06070 (1216663) | 1216663..1219134 | + | 2472 | WP_000048316.1 | exonuclease | - |
| EXE31_RS06075 (1219207) | 1219207..1219458 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| EXE31_RS06080 (1219493) | 1219493..1220581 | + | 1089 | WP_000877003.1 | IS91 family transposase ISTha3 | Transposase |
| EXE31_RS06085 (1220644) | 1220644..1221806 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| EXE31_RS06090 (1221834) | 1221834..1222034 | + | 201 | Protein_1195 | site-specific integrase | - |
| EXE31_RS06095 (1222222) | 1222222..1223241 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EXE31_RS06100 (1223253) | 1223253..1224467 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EXE31_RS06105 (1224673) | 1224673..1224999 | - | 327 | WP_001295395.1 | YnfA family protein | - |
| EXE31_RS06110 (1225134) | 1225134..1225475 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| EXE31_RS06115 (1225510) | 1225510..1226070 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| EXE31_RS06120 (1226073) | 1226073..1226783 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EXE31_RS06125 (1226891) | 1226891..1227196 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| EXE31_RS06130 (1227395) | 1227395..1229821 | + | 2427 | WP_000041563.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| EXE31_RS06135 (1229882) | 1229882..1232305 | + | 2424 | WP_001492046.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| EXE31_RS06140 (1232316) | 1232316..1232933 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EXE31_RS06145 (1232935) | 1232935..1233789 | + | 855 | WP_000526505.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| EXE31_RS06150 (1233832) | 1233832..1234446 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EXE31_RS06155 (1234605) | 1234605..1235897 | + | 1293 | WP_071592663.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EXE31_RS06160 (1235850) | 1235850..1236545 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EXE31_RS06165 (1236670) | 1236670..1237890 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|