MGE detailed information
MGE type: Conjugative plasmid MGE length: 63103 bp
Accession: NZ_CP035848 Location: 1..63103 Organism: Escherichia coli strain TW10598 Replicon: plasmid pTW10598_63
Accession: NZ_CP035848 Location: 1..63103 Organism: Escherichia coli strain TW10598 Replicon: plasmid pTW10598_63
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA01_RS24620 (139) | 139..453 | + | 315 | WP_000870669.1 | hypothetical protein | - |
| - (410) | 410..609 | + | 200 | NuclAT_0 | - | - |
| - (410) | 410..609 | + | 200 | NuclAT_0 | - | - |
| - (410) | 410..609 | + | 200 | NuclAT_0 | - | - |
| - (410) | 410..609 | + | 200 | NuclAT_0 | - | - |
| - (410) | 410..609 | - | 200 | NuclAT_0 | - | - |
| EXA01_RS25705 (643) | 643..756 | + | 114 | Protein_2 | DUF5431 family protein | - |
| EXA01_RS24625 (704) | 704..823 | + | 120 | WP_230937412.1 | Hok/Gef family protein | - |
| EXA01_RS24630 (1124) | 1124..1373 | - | 250 | Protein_4 | hypothetical protein | - |
| EXA01_RS24635 (1672) | 1672..1968 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| EXA01_RS24640 (2077) | 2077..2898 | + | 822 | WP_001234437.1 | DUF932 domain-containing protein | - |
| EXA01_RS24645 (3194) | 3194..3796 | - | 603 | WP_072205450.1 | hypothetical protein | VF |
| EXA01_RS24650 (4119) | 4119..4502 | + | 384 | WP_001342639.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EXA01_RS24655 (4693) | 4693..5346 | + | 654 | WP_001342640.1 | conjugal transfer protein TraJ | - |
| EXA01_RS24660 (5471) | 5471..5698 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| EXA01_RS24665 (5731) | 5731..6093 | + | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| EXA01_RS24670 (6098) | 6098..6409 | + | 312 | WP_000012097.1 | type IV conjugative transfer system protein TraL | - |
| EXA01_RS24675 (6431) | 6431..6997 | + | 567 | WP_000399805.1 | type IV conjugative transfer system protein TraE | - |
| EXA01_RS24680 (6984) | 6984..7712 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| EXA01_RS24685 (7712) | 7712..9139 | + | 1428 | WP_001462160.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| EXA01_RS24690 (9129) | 9129..9713 | + | 585 | WP_000002795.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| EXA01_RS24695 (9700) | 9700..10020 | + | 321 | WP_001057302.1 | conjugal transfer protein TrbD | - |
| EXA01_RS24700 (10013) | 10013..10264 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| EXA01_RS24705 (10261) | 10261..10776 | + | 516 | WP_000809891.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EXA01_RS24710 (10911) | 10911..11132 | + | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| EXA01_RS24715 (11125) | 11125..11601 | + | 477 | WP_000549587.1 | hypothetical protein | - |
| EXA01_RS24720 (11681) | 11681..11899 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| EXA01_RS24725 (11927) | 11927..12274 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| EXA01_RS24730 (12400) | 12400..13029 | + | 630 | Protein_24 | TraC family protein | - |
| EXA01_RS24735 (13194) | 13194..15824 | + | 2631 | WP_000069752.1 | type IV secretion system protein TraC | - |
| EXA01_RS24740 (15821) | 15821..16207 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| EXA01_RS24745 (16204) | 16204..16836 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| EXA01_RS24750 (16833) | 16833..17825 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| EXA01_RS24755 (17855) | 17855..18160 | + | 306 | WP_000224411.1 | hypothetical protein | - |
| EXA01_RS24760 (18169) | 18169..18807 | + | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EXA01_RS24765 (18804) | 18804..20612 | + | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EXA01_RS24770 (20639) | 20639..20896 | + | 258 | WP_000864344.1 | conjugal transfer protein TrbE | - |
| EXA01_RS24775 (20889) | 20889..21632 | + | 744 | WP_001030400.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EXA01_RS24780 (21648) | 21648..21986 | + | 339 | WP_001287901.1 | conjugal transfer protein TrbA | - |
| EXA01_RS24785 (22113) | 22113..22397 | + | 285 | WP_000623730.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EXA01_RS24790 (22384) | 22384..22929 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EXA01_RS24795 (22859) | 22859..23200 | + | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| EXA01_RS24800 (23181) | 23181..23573 | + | 393 | WP_000660703.1 | F-type conjugal transfer protein TrbF | - |
| EXA01_RS24805 (23560) | 23560..24933 | + | 1374 | WP_001137361.1 | conjugal transfer pilus assembly protein TraH | - |
| EXA01_RS24810 (24930) | 24930..27755 | + | 2826 | WP_096929783.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| EXA01_RS24815 (27752) | 27752..28261 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| EXA01_RS24820 (28296) | 28296..29006 | + | 711 | WP_244574116.1 | conjugal transfer complement resistance protein TraT | - |
| EXA01_RS24825 (29209) | 29209..29946 | + | 738 | WP_122994479.1 | hypothetical protein | - |
| EXA01_RS24830 (29997) | 29997..32204 | + | 2208 | WP_216311697.1 | type IV conjugative transfer system coupling protein TraD | - |
| EXA01_RS24835 (32204) | 32204..37474 | + | 5271 | WP_000986937.1 | Multifunctional conjugation protein TraI | Relaxase |
| EXA01_RS24840 (37523) | 37523..37942 | + | 420 | WP_000451342.1 | hypothetical protein | - |
| EXA01_RS24845 (37997) | 37997..38698 | + | 702 | WP_231234467.1 | conjugal transfer pilus acetylase TraX | - |
| EXA01_RS24850 (38753) | 38753..39313 | + | 561 | WP_000139346.1 | fertility inhibition protein FinO | - |
| EXA01_RS24855 (39445) | 39445..39657 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| EXA01_RS24860 (39903) | 39903..40364 | + | 462 | WP_001233850.1 | thermonuclease family protein | - |
| EXA01_RS24865 (40410) | 40410..40619 | + | 210 | WP_001353639.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| EXA01_RS24870 (40657) | 40657..41247 | + | 591 | WP_000766829.1 | DUF2726 domain-containing protein | - |
| EXA01_RS24875 (41487) | 41487..41747 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| EXA01_RS25710 (41783) | 41783..42019 | - | 237 | WP_244574115.1 | replication protein RepA | - |
| EXA01_RS25715 (42010) | 42010..42057 | + | 48 | WP_077822033.1 | hypothetical protein | - |
| EXA01_RS24885 (42050) | 42050..42907 | + | 858 | WP_000130963.1 | incFII family plasmid replication initiator RepA | - |
| EXA01_RS24890 (43609) | 43609..43749 | + | 141 | WP_000829596.1 | hypothetical protein | - |
| EXA01_RS24895 (43822) | 43822..44091 | + | 270 | WP_000079945.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| EXA01_RS24900 (44091) | 44091..44369 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| EXA01_RS24905 (44441) | 44441..44619 | + | 179 | Protein_60 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EXA01_RS24910 (44690) | 44690..45571 | + | 882 | WP_000005460.1 | hypothetical protein | - |
| EXA01_RS24915 (45506) | 45506..45925 | - | 420 | WP_086405430.1 | hypothetical protein | - |
| EXA01_RS24920 (46034) | 46034..46384 | - | 351 | WP_001414994.1 | plasmid partitioning/stability family protein | - |
| EXA01_RS24925 (46387) | 46387..47349 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| EXA01_RS24930 (47520) | 47520..47789 | + | 270 | WP_072126982.1 | hypothetical protein | - |
| EXA01_RS24935 (47884) | 47884..48762 | + | 879 | WP_000545759.1 | DUF1281 domain-containing protein | - |
| EXA01_RS24940 (48753) | 48753..48938 | + | 186 | Protein_67 | antirestriction protein | - |
| EXA01_RS24945 (48985) | 48985..49407 | + | 423 | WP_000271709.1 | DUF1380 family protein | - |
| EXA01_RS24950 (49404) | 49404..49595 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| EXA01_RS24955 (49915) | 49915..50508 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| EXA01_RS24960 (50621) | 50621..51826 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| EXA01_RS24965 (51908) | 51908..52531 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| EXA01_RS25720 (52515) | 52515..52745 | + | 231 | WP_071703863.1 | hypothetical protein | - |
| EXA01_RS25725 (52743) | 52743..52946 | - | 204 | Protein_74 | hypothetical protein | - |
| EXA01_RS24975 (53409) | 53409..53639 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| EXA01_RS24980 (53691) | 53691..55052 | + | 1362 | WP_000170673.1 | DUF3560 domain-containing protein | - |
| EXA01_RS24985 (55099) | 55099..55662 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| EXA01_RS25730 (55662) | 55662..55904 | + | 243 | WP_001610271.1 | hypothetical protein | - |
| EXA01_RS25735 (55814) | 55814..56074 | + | 261 | WP_071600428.1 | hypothetical protein | - |
| EXA01_RS24990 (55978) | 55978..56202 | - | 225 | WP_074573946.1 | hypothetical protein | - |
| EXA01_RS24995 (57199) | 57199..59100 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| EXA01_RS25000 (59249) | 59249..59734 | + | 486 | WP_050487339.1 | single-stranded DNA-binding protein | - |
| EXA01_RS25005 (59790) | 59790..60023 | + | 234 | WP_000005975.1 | DUF905 domain-containing protein | - |
| EXA01_RS25010 (60082) | 60082..62040 | + | 1959 | WP_001145497.1 | ParB/RepB/Spo0J family partition protein | - |
| EXA01_RS25015 (62095) | 62095..62529 | + | 435 | WP_000845950.1 | conjugation system SOS inhibitor PsiB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|