MGE detailed information
MGE type: Prophage MGE length: 52161 bp
Accession: NZ_CP035841 Location: 176778..228938 Organism: Escherichia coli strain TW10722 Replicon: chromosome
Accession: NZ_CP035841 Location: 176778..228938 Organism: Escherichia coli strain TW10722 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA02_RS00965 () | 171816..172937 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| EXA02_RS00970 () | 173083..174312 | - | 1230 | WP_000359463.1 | peptidase T | - |
| EXA02_RS00975 () | 174562..175698 | + | 1137 | WP_000531601.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| EXA02_RS00980 () | 175682..176545 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| EXA02_RS00985 () | 176778..176951 | - | 174 | Protein_189 | tail fiber assembly protein | - |
| EXA02_RS00990 () | 177101..177769 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| EXA02_RS00995 () | 177824..178408 | - | 585 | WP_000885580.1 | tail fiber assembly protein | - |
| EXA02_RS01000 () | 178408..181821 | - | 3414 | WP_216266860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EXA02_RS01005 () | 181886..182485 | - | 600 | WP_001233120.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| EXA02_RS01010 () | 182553..186032 | - | 3480 | WP_216266863.1 | host specificity protein J | - |
| EXA02_RS01015 () | 186093..186668 | - | 576 | WP_126738771.1 | tail assembly protein | - |
| EXA02_RS01020 () | 186632..187375 | - | 744 | WP_001355865.1 | C40 family peptidase | - |
| EXA02_RS01025 () | 187380..188078 | - | 699 | WP_001152385.1 | phage minor tail protein L | - |
| EXA02_RS01030 () | 188088..188417 | - | 330 | WP_000447252.1 | phage tail protein | - |
| EXA02_RS01035 () | 188417..191473 | - | 3057 | WP_000372007.1 | phage tail tape measure protein | - |
| EXA02_RS01040 () | 191445..191774 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| EXA02_RS01045 () | 191783..192169 | - | 387 | WP_001384509.1 | phage minor tail protein G | - |
| EXA02_RS01050 () | 192230..192973 | - | 744 | WP_000211108.1 | phage tail protein | - |
| EXA02_RS01055 () | 192985..193386 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| EXA02_RS01060 () | 193383..193961 | - | 579 | WP_000677105.1 | phage tail protein | - |
| EXA02_RS01065 () | 193973..194248 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| EXA02_RS01070 () | 194241..194564 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| EXA02_RS01075 () | 194651..196678 | - | 2028 | WP_001355864.1 | Clp protease ClpP | - |
| EXA02_RS01080 () | 196623..198203 | - | 1581 | WP_077627205.1 | phage portal protein | - |
| EXA02_RS01085 () | 198131..198343 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| EXA02_RS01090 () | 198340..200442 | - | 2103 | WP_000934138.1 | phage terminase large subunit family protein | - |
| EXA02_RS01095 () | 200442..200936 | - | 495 | WP_000373431.1 | DUF1441 family protein | - |
| EXA02_RS01100 () | 201519..201911 | - | 393 | WP_000415818.1 | hypothetical protein | - |
| EXA02_RS01105 () | 202270..202383 | - | 114 | WP_001297666.1 | hypothetical protein | - |
| EXA02_RS01110 () | 202516..202893 | - | 378 | WP_001117826.1 | M15 family metallopeptidase | - |
| EXA02_RS01115 () | 202896..203171 | - | 276 | WP_000950576.1 | phage holin family protein | - |
| EXA02_RS01120 () | 203161..203553 | - | 393 | WP_001355862.1 | putative holin | - |
| EXA02_RS01125 () | 203640..203792 | - | 153 | WP_000833655.1 | DUF3927 family protein | - |
| EXA02_RS01130 () | 203789..204214 | - | 426 | WP_000466939.1 | tellurite/colicin resistance protein | - |
| EXA02_RS01150 () | 204690..205739 | - | 1050 | WP_000611216.1 | site-specific DNA-methyltransferase | - |
| EXA02_RS01155 () | 205890..206087 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| EXA02_RS01160 () | 206400..206942 | - | 543 | WP_000640042.1 | DUF1133 family protein | - |
| EXA02_RS01165 () | 206951..207316 | - | 366 | WP_000140022.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EXA02_RS01170 () | 207317..208375 | - | 1059 | WP_001265297.1 | DUF968 domain-containing protein | - |
| EXA02_RS01175 () | 208377..208655 | - | 279 | WP_023607105.1 | hypothetical protein | - |
| EXA02_RS01180 () | 208722..208982 | - | 261 | WP_000701918.1 | hypothetical protein | - |
| EXA02_RS01185 () | 209183..209668 | - | 486 | WP_000818165.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| EXA02_RS01190 () | 209687..209866 | - | 180 | WP_001277775.1 | hypothetical protein | - |
| EXA02_RS01195 () | 210082..210237 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - | 210249..210307 | + | 59 | - | - | Antitoxin Detail |
| EXA02_RS01200 () | 210529..210951 | - | 423 | WP_000160146.1 | hypothetical protein | - |
| EXA02_RS01205 () | 211191..211472 | - | 282 | Protein_230 | DUF4406 domain-containing protein | - |
| EXA02_RS01210 () | 211469..211750 | - | 282 | WP_001509842.1 | hypothetical protein | - |
| EXA02_RS01215 () | 211783..212544 | - | 762 | WP_000450703.1 | DUF1627 domain-containing protein | - |
| EXA02_RS01220 () | 212566..213312 | - | 747 | WP_000788772.1 | ATP-binding protein | - |
| EXA02_RS01225 () | 213318..214283 | - | 966 | WP_000054517.1 | hypothetical protein | - |
| EXA02_RS01230 () | 214264..214785 | - | 522 | WP_000705382.1 | toxin YdaT family protein | - |
| EXA02_RS01235 () | 214769..214996 | - | 228 | WP_000476985.1 | Cro/CI family transcriptional regulator | - |
| EXA02_RS01240 () | 215074..215481 | + | 408 | WP_001003379.1 | helix-turn-helix domain-containing protein | - |
| EXA02_RS01245 () | 215671..215826 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EXA02_RS01250 () | 215986..216204 | + | 219 | WP_001171921.1 | protein YdfC | - |
| EXA02_RS01255 () | 216227..216634 | + | 408 | WP_000394517.1 | hypothetical protein | - |
| EXA02_RS01260 () | 216612..216845 | - | 234 | WP_000920491.1 | hypothetical protein | - |
| EXA02_RS01265 () | 217412..217600 | + | 189 | WP_000449198.1 | cell division inhibition protein DicB | - |
| EXA02_RS01270 () | 217597..217800 | + | 204 | WP_001090252.1 | DUF1482 family protein | - |
| EXA02_RS01275 () | 217880..220351 | + | 2472 | WP_001398899.1 | exonuclease | - |
| EXA02_RS01280 () | 220413..220682 | + | 270 | WP_000003742.1 | excisionase | - |
| EXA02_RS01285 () | 220651..221769 | + | 1119 | WP_000074994.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| EXA02_RS01290 () | 221936..222730 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| EXA02_RS01295 () | 222727..223773 | + | 1047 | WP_000759318.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| EXA02_RS01300 () | 223831..224292 | + | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| EXA02_RS01305 () | 224289..225077 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| EXA02_RS01310 () | 225216..226037 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| EXA02_RS01315 () | 226053..226964 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| EXA02_RS01320 () | 226993..228237 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| EXA02_RS01325 () | 228237..228938 | - | 702 | WP_001033694.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| EXA02_RS01330 () | 228931..230130 | - | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| EXA02_RS01335 () | 230392..231465 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|