MGE detailed information
MGE type: Prophage MGE length: 29453 bp
Accession: NZ_CP035836 Location: 765307..794759 Organism: Escherichia coli strain WS1933D Replicon: chromosome
Accession: NZ_CP035836 Location: 765307..794759 Organism: Escherichia coli strain WS1933D Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA03_RS03875 (761821) | 761821..762567 | + | 747 | WP_001324973.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EXA03_RS03880 (762656) | 762656..763342 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| EXA03_RS03885 (763519) | 763519..763722 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EXA03_RS03890 (763758) | 763758..765218 | - | 1461 | WP_000527780.1 | mannitol dehydrogenase family protein | - |
| EXA03_RS03895 (765307) | 765307..766590 | - | 1284 | Protein_770 | MHS family MFS transporter YdfJ | - |
| EXA03_RS03905 (768530) | 768530..768643 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| EXA03_RS03910 (768712) | 768712..768945 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EXA03_RS03915 (769262) | 769262..769852 | + | 591 | WP_000086530.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EXA03_RS03920 (769950) | 769950..770072 | - | 123 | Protein_775 | tail fiber assembly protein | - |
| EXA03_RS03925 (770124) | 770124..773408 | - | 3285 | WP_000279079.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EXA03_RS03930 (773473) | 773473..774057 | - | 585 | WP_029379692.1 | Outer membrane protein X | VF |
| EXA03_RS03935 (774021) | 774021..774275 | - | 255 | Protein_778 | DUF1441 family protein | - |
| EXA03_RS03940 (774355) | 774355..775032 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EXA03_RS03945 (775032) | 775032..775379 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXA03_RS03950 (775399) | 775399..776970 | + | 1572 | WP_001748001.1 | IS66 family transposase ISCro1 | Transposase |
| EXA03_RS03955 (777555) | 777555..777761 | - | 207 | WP_001031431.1 | hypothetical protein | - |
| EXA03_RS03960 (778062) | 778062..778493 | + | 432 | WP_000035576.1 | DUF1398 domain-containing protein | - |
| EXA03_RS03965 (778645) | 778645..778818 | - | 174 | WP_001019139.1 | addiction module toxin, GnsA/GnsB family | - |
| EXA03_RS03970 (778990) | 778990..779145 | - | 156 | WP_001309517.1 | protein YnfN | - |
| EXA03_RS03975 (779225) | 779225..779290 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| EXA03_RS03980 (779293) | 779293..779481 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EXA03_RS03985 (779492) | 779492..779704 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EXA03_RS03990 (780066) | 780066..780563 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EXA03_RS03995 (780560) | 780560..781093 | - | 534 | WP_001092971.1 | lysozyme | - |
| EXA03_RS04000 (781090) | 781090..781401 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EXA03_RS04005 (781406) | 781406..781621 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EXA03_RS04010 (781841) | 781841..782011 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EXA03_RS04015 (782375) | 782375..782590 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EXA03_RS04020 (782891) | 782891..783103 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EXA03_RS04025 (783158) | 783158..783247 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EXA03_RS04030 (783525) | 783525..784277 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EXA03_RS04035 (784291) | 784291..785340 | - | 1050 | WP_001265200.1 | DUF968 domain-containing protein | - |
| EXA03_RS04040 (785342) | 785342..785620 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EXA03_RS04045 (785687) | 785687..785938 | - | 252 | WP_000980994.1 | protein Rem | - |
| EXA03_RS04050 (786155) | 786155..786310 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EXA03_RS04055 (786382) | 786382..786669 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EXA03_RS04060 (786669) | 786669..786908 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EXA03_RS04065 (786933) | 786933..787142 | + | 210 | Protein_804 | hypothetical protein | - |
| EXA03_RS04070 (787141) | 787141..787269 | - | 129 | Protein_805 | dicB transcriptional regulator DicC | - |
| EXA03_RS04075 (787353) | 787353..787760 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EXA03_RS04080 (787927) | 787927..788082 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EXA03_RS04085 (788084) | 788084..788659 | + | 576 | WP_000344953.1 | hypothetical protein | - |
| EXA03_RS04090 (789146) | 789146..789334 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EXA03_RS04095 (789331) | 789331..789522 | + | 192 | WP_001083278.1 | lysis protein YdfD | - |
| EXA03_RS04100 (789616) | 789616..792087 | + | 2472 | WP_000048316.1 | exonuclease | - |
| EXA03_RS04105 (792160) | 792160..792411 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| EXA03_RS04110 (792446) | 792446..793534 | + | 1089 | WP_000877003.1 | IS91 family transposase ISTha3 | Transposase |
| EXA03_RS04115 (793597) | 793597..794759 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| EXA03_RS04120 (794787) | 794787..794987 | + | 201 | Protein_815 | site-specific integrase | - |
| EXA03_RS04125 (795175) | 795175..796194 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EXA03_RS04130 (796206) | 796206..797420 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EXA03_RS04135 (797626) | 797626..797952 | - | 327 | WP_001295395.1 | YnfA family protein | - |
| EXA03_RS04140 (798087) | 798087..798428 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| EXA03_RS04145 (798463) | 798463..799023 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| EXA03_RS04150 (799026) | 799026..799736 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|