MGE detailed information
MGE type: IScluster/Tn MGE length: 12288 bp
Accession: NZ_CP035833 Location: 50486..62773 Organism: Escherichia coli strain 025542-1 Replicon: plasmid p025542_98
Accession: NZ_CP035833 Location: 50486..62773 Organism: Escherichia coli strain 025542-1 Replicon: plasmid p025542_98
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA04_RS25015 | 45736..46098 | + | 363 | WP_000759959.1 | protein CexE | - |
| EXA04_RS25020 | 46371..47507 | + | 1137 | WP_000011389.1 | hypothetical protein | - |
| EXA04_RS25025 | 47504..48706 | + | 1203 | WP_000691222.1 | TolC family protein | - |
| EXA04_RS25030 | 48669..49436 | + | 768 | WP_001486749.1 | hypothetical protein | - |
| EXA04_RS25035 | 49429..50055 | + | 627 | WP_000593973.1 | ABC transporter ATP-binding protein | - |
| EXA04_RS25040 | 50486..53494 | - | 3009 | WP_001110536.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| EXA04_RS25045 | 53665..54231 | + | 567 | WP_000904908.1 | Tn3 family transposase TnBth3 | Transposase |
| EXA04_RS26510 | 54228..54641 | + | 414 | WP_001046769.1 | hypothetical protein | - |
| EXA04_RS25055 | 55090..55787 | + | 698 | WP_099550739.1 | IS1 family transposase | - |
| EXA04_RS26515 | 55807..56553 | + | 747 | WP_235838502.1 | ATP-binding protein | - |
| EXA04_RS26520 | 56870..57499 | + | 630 | WP_000943192.1 | hypothetical protein | - |
| EXA04_RS25065 | 58253..58537 | + | 285 | WP_001743519.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EXA04_RS25070 | 58537..58812 | + | 276 | WP_000421265.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EXA04_RS25075 | 58975..60051 | + | 1077 | WP_000610005.1 | hypothetical protein | - |
| EXA04_RS26525 | 60302..60382 | + | 81 | Protein_63 | hypothetical protein | - |
| EXA04_RS25080 | 60381..61287 | - | 907 | Protein_64 | IS3 family transposase ISEc52 | Transposase |
| EXA04_RS25085 | 61297..62448 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| EXA04_RS25090 | 62516..62773 | - | 258 | Protein_66 | IS3 family transposase ISEc52 | Transposase |
| EXA04_RS26530 | 62844..62981 | + | 138 | Protein_67 | hypothetical protein | - |
| EXA04_RS25105 | 63590..63664 | - | 75 | Protein_68 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| EXA04_RS25110 | 65078..65473 | - | 396 | WP_000445942.1 | plasmid partitioning/stability family protein | - |
| EXA04_RS25115 | 65473..66432 | - | 960 | WP_000921959.1 | plasmid segregation protein ParM | - |
| EXA04_RS25120 | 66870..67772 | + | 903 | WP_077628973.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|