MGE detailed information
MGE type: Mobilizable plasmid MGE length: 98355 bp
Accession: NZ_CP035833 Location: 1..98355 Organism: Escherichia coli strain 025542-1 Replicon: plasmid p025542_98
Accession: NZ_CP035833 Location: 1..98355 Organism: Escherichia coli strain 025542-1 Replicon: plasmid p025542_98
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA04_RS26495 | 1188..1283 | - | 96 | Protein_1 | DUF3800 domain-containing protein | - |
| EXA04_RS24780 | 1369..1995 | - | 627 | WP_000227274.1 | hypothetical protein | - |
| EXA04_RS24790 | 3289..3420 | + | 132 | WP_064765989.1 | Hok/Gef family protein | - |
| EXA04_RS24795 | 3704..3964 | + | 261 | WP_000083816.1 | replication regulatory protein RepA | - |
| EXA04_RS26500 | 3990..4226 | - | 237 | WP_235838506.1 | replication protein RepA | - |
| EXA04_RS26505 | 4217..4264 | + | 48 | WP_077822033.1 | hypothetical protein | - |
| EXA04_RS24805 | 4257..5114 | + | 858 | WP_000130956.1 | incFII family plasmid replication initiator RepA | - |
| EXA04_RS24810 | 6019..6288 | + | 270 | WP_000079921.1 | type II toxin-antitoxin system antitoxin YacA | - |
| EXA04_RS24815 | 6288..6488 | + | 201 | Protein_10 | type II toxin-antitoxin system toxin YacB | - |
| EXA04_RS24820 | 6733..7941 | - | 1209 | WP_001695118.1 | IS91 family transposase ISSbo1 | Transposase |
| EXA04_RS24825 | 7922..8194 | - | 273 | WP_001695087.1 | hypothetical protein | - |
| EXA04_RS24835 | 8263..8502 | + | 240 | Protein_13 | helix-turn-helix domain-containing protein | - |
| EXA04_RS24840 | 8624..9837 | + | 1214 | WP_164544955.1 | IS3 family transposase IS629 | Transposase |
| EXA04_RS24845 | 9879..10312 | - | 434 | Protein_15 | IS91 family transposase ISEc37 | Transposase |
| EXA04_RS24850 | 10312..10677 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| EXA04_RS24855 | 10766..10879 | + | 114 | Protein_17 | hypothetical protein | - |
| EXA04_RS24860 | 11082..12893 | + | 1812 | WP_000260524.1 | Heme/hemopexin transporter protein HuxB | VF |
| EXA04_RS24865 | 12983..17602 | + | 4620 | WP_001080112.1 | Heme/hemopexin-binding protein | VF |
| EXA04_RS24870 | 17627..17812 | + | 186 | WP_000894829.1 | hypothetical protein | - |
| EXA04_RS24875 | 17884..19797 | + | 1914 | WP_001379721.1 | UDP-glucose:protein N-beta-glucosyltransferase | VF |
| EXA04_RS24880 | 19794..20288 | + | 495 | WP_001203081.1 | DUF2919 family protein | - |
| EXA04_RS24885 | 20397..21605 | - | 1209 | WP_000343747.1 | IS256 family transposase IS1414 | Transposase |
| EXA04_RS24890 | 21682..21906 | - | 225 | Protein_24 | IS21 family transposase ISEc12 | Transposase |
| EXA04_RS24895 | 22060..22533 | - | 474 | Protein_25 | IS66 family transposase ISEc47 | Transposase |
| EXA04_RS24900 | 22629..23842 | + | 1214 | WP_164544955.1 | IS3 family transposase IS629 | Transposase |
| EXA04_RS24905 | 24013..24413 | + | 401 | Protein_27 | Tn3 family transposase | - |
| EXA04_RS24910 | 25135..29229 | + | 4095 | WP_001045019.1 | Serine protease EatA | VF |
| EXA04_RS24915 | 29747..31318 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| EXA04_RS24920 | 31338..31685 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXA04_RS24925 | 31685..32362 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EXA04_RS24935 | 33651..34511 | + | 861 | Protein_33 | IS3 family transposase ISLad1 | Transposase |
| EXA04_RS24940 | 34519..34755 | + | 237 | Protein_34 | IS91 family transposase | - |
| EXA04_RS24945 | 35124..35921 | - | 798 | WP_000346362.1 | CFA/I fimbrial subunit D | VF |
| EXA04_RS24950 | 36119..36316 | + | 198 | WP_001413878.1 | ANR family transcriptional regulator | - |
| EXA04_RS24955 | 36709..37905 | + | 1197 | WP_001380562.1 | IS110 family transposase ISEc20 | Transposase |
| EXA04_RS24960 | 38082..38249 | - | 168 | Protein_38 | IS91 family transposase | - |
| EXA04_RS24965 | 38259..38447 | + | 189 | Protein_39 | IS3 family transposase IS1203 | Transposase |
| EXA04_RS24970 | 38539..38772 | + | 234 | WP_000124077.1 | hypothetical protein | - |
| EXA04_RS24975 | 38772..39119 | + | 348 | WP_000624640.1 | IS66 family transposase ISCro1 | Transposase |
| EXA04_RS24980 | 39139..40172 | + | 1034 | Protein_42 | IS66 family transposase ISCro1 | Transposase |
| EXA04_RS24985 | 40150..40290 | - | 141 | Protein_43 | IS66 family transposase ISCro1 | Transposase |
| EXA04_RS24990 | 40497..41741 | + | 1245 | WP_001484926.1 | hypothetical protein | - |
| EXA04_RS24995 | 42178..42630 | + | 453 | Protein_45 | IS5 family transposase | - |
| EXA04_RS25005 | 43942..44442 | + | 501 | Protein_47 | IS3 family transposase ISKpn38 | Transposase |
| EXA04_RS25015 | 45736..46098 | + | 363 | WP_000759959.1 | protein CexE | - |
| EXA04_RS25020 | 46371..47507 | + | 1137 | WP_000011389.1 | hypothetical protein | - |
| EXA04_RS25025 | 47504..48706 | + | 1203 | WP_000691222.1 | TolC family protein | - |
| EXA04_RS25030 | 48669..49436 | + | 768 | WP_001486749.1 | hypothetical protein | - |
| EXA04_RS25035 | 49429..50055 | + | 627 | WP_000593973.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| EXA04_RS25040 | 50486..53494 | - | 3009 | WP_001110536.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| EXA04_RS25045 | 53665..54231 | + | 567 | WP_000904908.1 | Tn3 family transposase TnBth3 | Transposase |
| EXA04_RS26510 | 54228..54641 | + | 414 | WP_001046769.1 | hypothetical protein | - |
| EXA04_RS25055 | 55090..55787 | + | 698 | WP_099550739.1 | IS1 family transposase | - |
| EXA04_RS26515 | 55807..56553 | + | 747 | WP_235838502.1 | ATP-binding protein | - |
| EXA04_RS26520 | 56870..57499 | + | 630 | WP_000943192.1 | hypothetical protein | - |
| EXA04_RS25065 | 58253..58537 | + | 285 | WP_001743519.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EXA04_RS25070 | 58537..58812 | + | 276 | WP_000421265.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EXA04_RS25075 | 58975..60051 | + | 1077 | WP_000610005.1 | hypothetical protein | - |
| EXA04_RS26525 | 60302..60382 | + | 81 | Protein_63 | hypothetical protein | - |
| EXA04_RS25080 | 60381..61287 | - | 907 | Protein_64 | IS3 family transposase ISEc52 | Transposase |
| EXA04_RS25085 | 61297..62448 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| EXA04_RS25090 | 62516..62773 | - | 258 | Protein_66 | IS3 family transposase ISEc52 | Transposase |
| EXA04_RS26530 | 62844..62981 | + | 138 | Protein_67 | hypothetical protein | - |
| EXA04_RS25105 | 63590..63664 | - | 75 | Protein_68 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| EXA04_RS25110 | 65078..65473 | - | 396 | WP_000445942.1 | plasmid partitioning/stability family protein | - |
| EXA04_RS25115 | 65473..66432 | - | 960 | WP_000921959.1 | plasmid segregation protein ParM | - |
| EXA04_RS25120 | 66870..67772 | + | 903 | WP_077628973.1 | DUF1281 domain-containing protein | - |
| EXA04_RS25125 | 67769..68080 | + | 312 | WP_032174831.1 | hypothetical protein | - |
| EXA04_RS25130 | 68156..68695 | + | 540 | Protein_73 | DNA methyltransferase | - |
| EXA04_RS25135 | 68696..68998 | + | 303 | Protein_74 | conjugation system SOS inhibitor PsiB | - |
| EXA04_RS25140 | 68995..69714 | + | 720 | Protein_75 | plasmid SOS inhibition protein A | - |
| EXA04_RS25145 | 69714..70232 | + | 519 | WP_001178556.1 | hypothetical protein | - |
| EXA04_RS26535 | 70350..70502 | + | 153 | Protein_77 | FlmC family protein | - |
| EXA04_RS25150 | 70450..70569 | + | 120 | WP_228769536.1 | Hok/Gef family protein | - |
| EXA04_RS25155 | 70870..71119 | - | 250 | Protein_79 | hypothetical protein | - |
| EXA04_RS25160 | 71516..72097 | - | 582 | Protein_80 | IS110 family transposase IS1663 | Transposase |
| EXA04_RS25165 | 72129..73342 | + | 1214 | WP_164544958.1 | IS3 family transposase IS629 | Transposase |
| EXA04_RS25170 | 73396..73885 | - | 490 | Protein_82 | IS3 family transposase | - |
| EXA04_RS25175 | 73966..75474 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| EXA04_RS25180 | 76147..76835 | - | 689 | Protein_84 | IS3-like element ISEc52 family transposase | - |
| EXA04_RS25185 | 77203..78015 | + | 813 | WP_001696192.1 | DUF932 domain-containing protein | - |
| EXA04_RS25190 | 78321..78968 | - | 648 | WP_000614285.1 | hypothetical protein | VF |
| EXA04_RS25195 | 79253..79636 | + | 384 | WP_001151556.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EXA04_RS25200 | 79830..80325 | + | 496 | Protein_88 | PAS domain-containing protein | - |
| EXA04_RS25210 | 81696..82136 | + | 441 | Protein_90 | IS66 family transposase ISSfl3 | Transposase |
| EXA04_RS25215 | 83313..83507 | - | 195 | WP_001485221.1 | ANR family transcriptional regulator | - |
| EXA04_RS25220 | 83697..84492 | + | 796 | Protein_92 | CFA/I fimbrial subunit D | VF |
| EXA04_RS25225 | 84654..85736 | - | 1083 | WP_001033658.1 | CFA/I fimbrial subunit E | VF |
| EXA04_RS25230 | 85740..88349 | - | 2610 | WP_000680916.1 | hypothetical protein | VF |
| EXA04_RS25235 | 88414..88926 | - | 513 | WP_000669510.1 | CFA/I fimbrial subunit B | VF |
| EXA04_RS25240 | 88955..89671 | - | 717 | WP_000549244.1 | hypothetical protein | VF |
| EXA04_RS25245 | 89947..90077 | - | 131 | Protein_97 | IS3 family transposase | - |
| EXA04_RS25250 | 90533..91269 | - | 737 | Protein_98 | IS3 family transposase IS629 | Transposase |
| EXA04_RS25255 | 91554..91772 | + | 219 | WP_014654027.1 | Heat-stable enterotoxin A3/A4 | VF |
| EXA04_RS25265 | 93087..93914 | - | 828 | Protein_101 | IS21 family transposase ISEc10 | Transposase |
| EXA04_RS25270 | 94009..94269 | + | 261 | Protein_102 | ATP-binding protein | - |
| EXA04_RS25275 | 94335..94451 | - | 117 | Protein_103 | IS110 family transposase | - |
| EXA04_RS25280 | 94512..95725 | + | 1214 | WP_164544912.1 | IS3 family transposase IS629 | Transposase |
| EXA04_RS25285 | 95768..96469 | - | 702 | Protein_105 | DUF1281 domain-containing protein | - |
| EXA04_RS25290 | 97247..98218 | - | 972 | WP_000817029.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|