MGE detailed information
MGE type: Prophage MGE length: 87529 bp
Accession: NZ_CP035832 Location: 2168356..2255884 Organism: Escherichia coli strain 025542-1 Replicon: chromosome
Accession: NZ_CP035832 Location: 2168356..2255884 Organism: Escherichia coli strain 025542-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA04_RS10535 () | 2165404..2166375 | - | 972 | WP_000564745.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| EXA04_RS10540 () | 2166372..2167115 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| EXA04_RS10545 () | 2167156..2167551 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| EXA04_RS10550 () | 2167604..2168374 | - | 771 | WP_050489330.1 | DUF72 domain-containing protein | - |
| EXA04_RS10555 () | 2168356..2169669 | - | 1314 | WP_001696025.1 | hypothetical protein ; Integrase | Integrase |
| EXA04_RS10560 () | 2169725..2169961 | - | 237 | WP_000528717.1 | excisionase family protein | - |
| EXA04_RS10565 () | 2169970..2170116 | - | 147 | WP_001030144.1 | hypothetical protein | - |
| EXA04_RS10570 () | 2170120..2170362 | - | 243 | WP_001695576.1 | DUF4222 domain-containing protein | - |
| EXA04_RS10575 () | 2170394..2170765 | - | 372 | WP_001695578.1 | DUF5406 family protein | - |
| EXA04_RS10580 () | 2170806..2171633 | - | 828 | WP_000720008.1 | SPFH domain-containing protein | - |
| EXA04_RS26330 () | 2171630..2171818 | - | 189 | WP_001242070.1 | hypothetical protein | - |
| EXA04_RS10585 () | 2171996..2172577 | - | 582 | WP_001695583.1 | hypothetical protein | - |
| EXA04_RS10590 () | 2172574..2172762 | - | 189 | WP_001695585.1 | hypothetical protein | - |
| EXA04_RS10595 () | 2172959..2173165 | - | 207 | WP_000141090.1 | hypothetical protein | - |
| EXA04_RS10600 () | 2173453..2174001 | - | 549 | WP_032327430.1 | helix-turn-helix transcriptional regulator | - |
| EXA04_RS10605 () | 2174147..2174836 | - | 690 | WP_000800136.1 | LexA family transcriptional regulator | - |
| EXA04_RS10610 () | 2174970..2175242 | + | 273 | WP_001695592.1 | YdaS family helix-turn-helix protein | - |
| EXA04_RS10615 () | 2175313..2175606 | - | 294 | WP_000867914.1 | hypothetical protein | - |
| EXA04_RS10620 () | 2175726..2176433 | + | 708 | WP_001695593.1 | Rha family transcriptional regulator | - |
| EXA04_RS10625 () | 2176546..2177208 | + | 663 | WP_001695594.1 | ash family protein | - |
| EXA04_RS10630 () | 2177205..2177399 | + | 195 | WP_032327431.1 | hypothetical protein | - |
| EXA04_RS10635 () | 2177396..2177620 | + | 225 | WP_001695595.1 | hypothetical protein | - |
| EXA04_RS10640 () | 2177617..2178573 | + | 957 | WP_024181719.1 | helix-turn-helix domain-containing protein | - |
| EXA04_RS10645 () | 2178584..2179462 | + | 879 | WP_001695597.1 | ATP-binding protein | - |
| EXA04_RS10650 () | 2179459..2180850 | + | 1392 | WP_001695598.1 | replicative DNA helicase | - |
| EXA04_RS10655 () | 2180847..2181104 | + | 258 | WP_001695599.1 | hypothetical protein | - |
| EXA04_RS10660 () | 2181104..2181487 | + | 384 | WP_001695600.1 | antiterminator Q family protein | - |
| EXA04_RS10665 () | 2181677..2182774 | - | 1098 | WP_001695601.1 | porin OmpC | - |
| EXA04_RS10670 () | 2183227..2183424 | + | 198 | WP_000917767.1 | hypothetical protein | - |
| EXA04_RS10675 () | 2183575..2184621 | + | 1047 | WP_032327577.1 | site-specific DNA-methyltransferase | - |
| EXA04_RS10700 () | 2185256..2185495 | + | 240 | WP_001695986.1 | hypothetical protein | - |
| EXA04_RS10705 () | 2185739..2186164 | + | 426 | WP_000466931.1 | tellurite/colicin resistance protein | - |
| EXA04_RS10710 () | 2186161..2186313 | + | 153 | WP_000833648.1 | DUF3927 family protein | - |
| EXA04_RS10715 () | 2186405..2186797 | + | 393 | WP_001695991.1 | putative holin | - |
| EXA04_RS10720 () | 2186787..2187062 | + | 276 | WP_000950570.1 | phage holin family protein | - |
| EXA04_RS10725 () | 2187068..2187445 | + | 378 | WP_001117823.1 | M15 family metallopeptidase | - |
| EXA04_RS10730 () | 2187460..2187642 | + | 183 | WP_126125445.1 | hypothetical protein | - |
| EXA04_RS10735 () | 2187690..2187863 | + | 174 | WP_237428020.1 | hypothetical protein | - |
| EXA04_RS10740 () | 2188310..2188804 | + | 495 | WP_000373425.1 | DUF1441 family protein | - |
| EXA04_RS10745 () | 2188804..2190906 | + | 2103 | WP_200995758.1 | phage terminase large subunit family protein | - |
| EXA04_RS10750 () | 2190903..2191115 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| EXA04_RS10755 () | 2191043..2192659 | + | 1617 | WP_216317264.1 | phage portal protein | - |
| EXA04_RS10760 () | 2192568..2194595 | + | 2028 | WP_216317265.1 | hypothetical protein | VF |
| EXA04_RS10765 () | 2194682..2195005 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| EXA04_RS10770 () | 2194998..2195273 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| EXA04_RS10775 () | 2195285..2195863 | + | 579 | WP_000677108.1 | phage tail protein | - |
| EXA04_RS10780 () | 2195860..2196261 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| EXA04_RS10785 () | 2196272..2197015 | + | 744 | WP_096955347.1 | Ig domain-containing protein | - |
| EXA04_RS10790 () | 2197076..2197462 | + | 387 | WP_001341514.1 | phage minor tail protein G | - |
| EXA04_RS10795 () | 2197471..2197800 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| EXA04_RS10800 () | 2197772..2200837 | + | 3066 | WP_000372024.1 | phage tail tape measure protein | - |
| EXA04_RS10805 () | 2200837..2201166 | + | 330 | WP_000447251.1 | phage tail protein | - |
| EXA04_RS10810 () | 2201176..2201874 | + | 699 | WP_001152371.1 | phage minor tail protein L | - |
| EXA04_RS10815 () | 2201879..2202622 | + | 744 | WP_001316792.1 | C40 family peptidase | - |
| EXA04_RS10820 () | 2202520..2203167 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| EXA04_RS10825 () | 2203228..2206623 | + | 3396 | WP_216317266.1 | host specificity protein J | - |
| EXA04_RS10830 () | 2206691..2207290 | + | 600 | WP_099481765.1 | hypothetical protein | VF |
| EXA04_RS10835 () | 2207355..2210705 | + | 3351 | WP_126125449.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EXA04_RS10840 () | 2210705..2211289 | + | 585 | WP_024181752.1 | tail fiber assembly protein | - |
| EXA04_RS26335 () | 2211614..2211715 | - | 102 | Protein_2122 | hypothetical protein | - |
| EXA04_RS10845 () | 2211712..2212278 | - | 567 | WP_000891611.1 | hydrolase | - |
| EXA04_RS10850 () | 2212588..2214360 | + | 1773 | WP_001258662.1 | aspartate--tRNA ligase | - |
| EXA04_RS10855 () | 2214478..2214930 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| EXA04_RS10860 () | 2214959..2215699 | + | 741 | WP_000907234.1 | hypothetical protein | VF |
| EXA04_RS10865 () | 2215734..2216255 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| EXA04_RS10870 () | 2216257..2216859 | - | 603 | WP_001024906.1 | YebB family permuted papain-like enzyme | - |
| EXA04_RS10875 () | 2216930..2216995 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| EXA04_RS10880 () | 2217134..2217745 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| EXA04_RS10885 () | 2217754..2218764 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| EXA04_RS10890 () | 2218911..2219696 | - | 786 | WP_000571465.1 | hypothetical protein | VF |
| EXA04_RS10895 () | 2219693..2220448 | - | 756 | WP_000202996.1 | hypothetical protein | VF |
| EXA04_RS10900 () | 2220527..2221459 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| EXA04_RS10905 () | 2221475..2222797 | + | 1323 | WP_216317267.1 | murein DD-endopeptidase MepM | - |
| EXA04_RS10910 () | 2222917..2223888 | + | 972 | WP_000448381.1 | hypothetical protein | VF |
| EXA04_RS10915 () | 2224019..2225461 | - | 1443 | WP_000091176.1 | pyruvate kinase | - |
| EXA04_RS10920 () | 2225589..2226458 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| EXA04_RS10925 () | 2226796..2228271 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| EXA04_RS10930 () | 2228506..2230317 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| EXA04_RS10935 () | 2230354..2230995 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EXA04_RS10940 () | 2231051..2232229 | - | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EXA04_RS10945 () | 2232363..2232653 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| EXA04_RS10950 () | 2232720..2233076 | + | 357 | WP_001295500.1 | protein YebF | - |
| EXA04_RS10955 () | 2233403..2234062 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| EXA04_RS10960 () | 2234271..2236331 | + | 2061 | WP_000936915.1 | oligopeptidase B | - |
| EXA04_RS10965 () | 2236328..2236990 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| EXA04_RS10970 () | 2237014..2237670 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein YobB | - |
| EXA04_RS10975 () | 2237772..2238002 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| EXA04_RS10980 () | 2238141..2238515 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| EXA04_RS10985 () | 2238519..2239391 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| EXA04_RS10990 () | 2239404..2239745 | + | 342 | WP_000976492.1 | YebY family protein | - |
| - | 2239773..2240044 | - | 272 | - | - | Antitoxin Detail |
| - | 2239903..2240006 | + | 104 | - | - | Toxin Detail |
| EXA04_RS10995 () | 2240141..2240797 | + | 657 | WP_000812723.1 | protein-serine/threonine phosphatase | - |
| EXA04_RS11000 () | 2240798..2240989 | - | 192 | WP_001338167.1 | YebW family protein | - |
| EXA04_RS11005 () | 2241094..2241330 | - | 237 | WP_001295499.1 | YebV family protein | - |
| EXA04_RS11010 () | 2241448..2242887 | - | 1440 | WP_001352399.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EXA04_RS11015 () | 2242967..2245600 | - | 2634 | WP_001297532.1 | hypothetical protein | VF |
| EXA04_RS11020 () | 2245569..2246852 | - | 1284 | WP_001301337.1 | membrane integrity lipid transport subunit YebS | - |
| EXA04_RS11025 () | 2246982..2247479 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| EXA04_RS11030 () | 2247576..2248274 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| EXA04_RS11035 () | 2248294..2250342 | + | 2049 | WP_001696313.1 | carboxy terminal-processing peptidase | - |
| EXA04_RS11040 () | 2250534..2251415 | + | 882 | WP_000984517.1 | protease HtpX | - |
| EXA04_RS11045 () | 2251461..2252834 | - | 1374 | WP_216317268.1 | MFS transporter | - |
| EXA04_RS11050 () | 2253011..2253802 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| EXA04_RS11055 () | 2253945..2254184 | - | 240 | WP_001211011.1 | YobH family protein | - |
| EXA04_RS11060 () | 2254343..2254486 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| EXA04_RS11065 () | 2254561..2254848 | + | 288 | WP_001696311.1 | YebO family protein | - |
| EXA04_RS11070 () | 2255519..2255662 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| EXA04_RS11075 () | 2255675..2255884 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| EXA04_RS11080 () | 2256050..2256859 | + | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| EXA04_RS11085 () | 2256856..2257422 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| EXA04_RS11090 () | 2257851..2258309 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| EXA04_RS11095 () | 2258364..2259215 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| EXA04_RS11100 () | 2259228..2260028 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|