NZ_CP0358321332691..1502384

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 169694 bp
Accession: NZ_CP035832        Location: 1332691..1502384         Organism: Escherichia coli strain 025542-1       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EXA04_RS06570 (1330835) 1330835..1332133 + 1299 WP_000841103.1 alpha-ketoglutarate permease -
EXA04_RS06575 (1332130) 1332130..1332453 - 324 WP_001300818.1 YfiM family lipoprotein -
EXA04_RS06580 (1332499) 1332499..1333854 - 1356 WP_000949265.1 CDP-diacylglycerol--serine O-phosphatidyltransferase -
EXA04_RS06585 (1333838) 1333838..1333879 - 42 WP_211180504.1 protein PssL -
EXA04_RS06590 (1333968) 1333968..1336628 - 2661 WP_000082969.1 protein lysine acetyltransferase -
EXA04_RS06595 (1336660) 1336660..1337358 - 699 WP_001343689.1 tRNA-uridine aminocarboxypropyltransferase -
EXA04_RS06600 (1337427) 1337427..1337846 - 420 WP_001098726.1 thioredoxin TrxC -
EXA04_RS06605 (1338053) 1338053..1339090 + 1038 WP_001760210.1 tRNA/rRNA methyltransferase -
EXA04_RS06610 (1339138) 1339138..1339827 - 690 WP_001262723.1 uracil-DNA glycosylase -
EXA04_RS06615 (1340132) 1340132..1340515 + 384 WP_000627807.1 autonomous glycyl radical cofactor GrcA -
EXA04_RS06620 (1340570) 1340570..1341157 - 588 WP_000189206.1 cysteine/O-acetylserine transporter -
EXA04_RS06625 (1341260) 1341260..1342141 + 882 WP_001297408.1 LysR family transcriptional regulator -
EXA04_RS06630 (1342174) 1342174..1343508 - 1335 WP_000219196.1 ATP-dependent RNA helicase SrmB -
EXA04_RS06635 (1343640) 1343640..1344377 + 738 WP_001297411.1 tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN -
EXA04_RS06640 (1344362) 1344362..1345984 - 1623 WP_001094498.1 L-aspartate oxidase -
EXA04_RS06645 (1346240) 1346240..1346395 + 156 WP_001303621.1 rpoE leader peptide RseD -
EXA04_RS06650 (1346392) 1346392..1346967 + 576 WP_001295364.1 hypothetical protein VF
EXA04_RS06655 (1347000) 1347000..1347650 + 651 WP_001168459.1 hypothetical protein VF
EXA04_RS06660 (1347650) 1347650..1348606 + 957 WP_000812053.1 hypothetical protein VF
EXA04_RS06665 (1348603) 1348603..1349082 + 480 WP_000589070.1 hypothetical protein VF
EXA04_RS06670 (1349280) 1349280..1351079 + 1800 WP_000790168.1 translation elongation factor 4 -
EXA04_RS06675 (1351095) 1351095..1352069 + 975 WP_000002542.1 signal peptidase I -
EXA04_RS06680 (1352341) 1352341..1353021 + 681 WP_001068343.1 ribonuclease III -
EXA04_RS06685 (1353018) 1353018..1353923 + 906 WP_000020737.1 GTPase Era -
EXA04_RS06690 (1353935) 1353935..1354663 + 729 WP_000399393.1 DNA repair protein RecO -
EXA04_RS06695 (1354675) 1354675..1355406 + 732 WP_001297412.1 hypothetical protein VF
EXA04_RS06700 (1355406) 1355406..1355786 + 381 WP_000986029.1 holo-ACP synthase -
- (1355808) 1355808..1355884 - 77 NuclAT_12 - -
- (1355808) 1355808..1355884 - 77 NuclAT_12 - -
- (1355808) 1355808..1355884 - 77 NuclAT_12 - -
- (1355808) 1355808..1355884 - 77 NuclAT_12 - -
EXA04_RS06705 (1356207) 1356207..1356287 + 81 WP_000128776.1 type I toxin-antitoxin system toxin ShoB -
EXA04_RS06710 (1356481) 1356481..1356741 - 261 WP_001196283.1 4Fe-4S dicluster ferredoxin YfhL -
EXA04_RS06715 (1356797) 1356797..1357645 - 849 WP_001013779.1 MurR/RpiR family transcriptional regulator -
EXA04_RS06720 (1357854) 1357854..1358489 + 636 WP_000190655.1 phosphatidylglycerophosphatase C -
EXA04_RS06725 (1358547) 1358547..1359050 + 504 WP_001297409.1 tRNA adenosine(34) deaminase TadA -
EXA04_RS06730 (1359047) 1359047..1360603 - 1557 WP_000734193.1 membrane-bound lytic murein transglycosylase MltF -
EXA04_RS06735 (1360861) 1360861..1364748 + 3888 WP_000970115.1 phosphoribosylformylglycinamidine synthase -
EXA04_RS06740 (1365324) 1365324..1366751 + 1428 WP_001297612.1 two component system sensor histidine kinase QseE/GlrK -
EXA04_RS06745 (1366916) 1366916..1367629 + 714 WP_001215888.1 two-component system QseEF-associated lipoprotein QseG -
EXA04_RS06750 (1367619) 1367619..1368953 + 1335 WP_001298983.1 hypothetical protein VF
EXA04_RS06755 (1369014) 1369014..1369352 + 339 WP_000717694.1 nitrogen regulatory protein P-II -
EXA04_RS06760 (1369397) 1369397..1370587 - 1191 WP_000883124.1 NO-inducible flavohemoprotein -
EXA04_RS06765 (1370915) 1370915..1372168 + 1254 WP_000919159.1 serine hydroxymethyltransferase -
EXA04_RS06770 (1372232) 1372232..1373425 - 1194 WP_001299519.1 ROK family protein -
EXA04_RS06775 (1373543) 1373543..1376824 + 3282 WP_001388179.1 DUF5107 domain-containing protein -
EXA04_RS06780 (1376921) 1376921..1377904 + 984 WP_001124907.1 substrate-binding domain-containing protein -
EXA04_RS06785 (1377927) 1377927..1379438 + 1512 WP_001696600.1 sugar ABC transporter ATP-binding protein -
EXA04_RS06790 (1379463) 1379463..1380461 + 999 WP_001276671.1 ABC transporter permease -
EXA04_RS06795 (1380494) 1380494..1381588 + 1095 WP_000700800.1 zinc-binding dehydrogenase -
EXA04_RS06800 (1381600) 1381600..1382472 + 873 WP_000158551.1 aldose 1-epimerase -
EXA04_RS06805 (1382520) 1382520..1382942 - 423 WP_001094726.1 DoxX family protein -
EXA04_RS06810 (1383039) 1383039..1384241 - 1203 WP_000660797.1 phenylpropionate dioxygenase ferredoxin reductase subunit -
EXA04_RS06815 (1384251) 1384251..1385063 - 813 WP_001281377.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase -
EXA04_RS06820 (1385060) 1385060..1385380 - 321 WP_001080102.1 bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit -
EXA04_RS06825 (1385380) 1385380..1385898 - 519 WP_001276072.1 3-phenylpropionate/cinnamic acid dioxygenase subunit beta -
EXA04_RS06830 (1385895) 1385895..1387256 - 1362 WP_000211172.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
EXA04_RS06835 (1387392) 1387392..1388282 + 891 WP_000423257.1 DNA-binding transcriptional regulator HcaR -
EXA04_RS06840 (1388442) 1388442..1389581 + 1140 WP_000244189.1 3-phenylpropionate MFS transporter -
EXA04_RS06845 (1389573) 1389573..1390853 - 1281 WP_000983009.1 stationary phase inducible protein CsiE -
EXA04_RS06850 (1391044) 1391044..1391898 - 855 WP_001297705.1 alpha/beta hydrolase -
EXA04_RS06855 (1392043) 1392043..1392846 - 804 WP_000553451.1 inositol-1-monophosphatase -
EXA04_RS06860 (1392965) 1392965..1393702 + 738 WP_000940018.1 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ -
EXA04_RS06865 (1394003) 1394003..1394491 + 489 WP_001241357.1 Fe-S cluster assembly transcriptional regulator IscR -
EXA04_RS06870 (1394603) 1394603..1395817 + 1215 WP_001295373.1 cysteine desulfurase -
EXA04_RS06875 (1395845) 1395845..1396231 + 387 WP_000331707.1 Fe-S cluster assembly scaffold IscU -
EXA04_RS06880 (1396248) 1396248..1396571 + 324 WP_000028953.1 iron-sulfur cluster assembly protein IscA -
EXA04_RS06885 (1396667) 1396667..1397182 + 516 WP_000384411.1 co-chaperone HscB -
EXA04_RS06890 (1397199) 1397199..1399049 + 1851 WP_001196613.1 Fe-S protein assembly chaperone HscA -
EXA04_RS06895 (1399051) 1399051..1399386 + 336 WP_001124469.1 ISC system 2Fe-2S type ferredoxin -
EXA04_RS06900 (1399398) 1399398..1399598 + 201 WP_000523616.1 Fe-S cluster assembly protein IscX -
EXA04_RS06905 (1399657) 1399657..1400940 + 1284 WP_000133608.1 aminopeptidase PepB -
EXA04_RS06910 (1401082) 1401082..1401858 + 777 WP_001297328.1 enhanced serine sensitivity protein SseB -
EXA04_RS26285 (1401890) 1401890..1402015 - 126 WP_001385884.1 small toxic inner membrane protein TimP -
EXA04_RS06915 (1402351) 1402351..1403196 - 846 WP_000108626.1 3-mercaptopyruvate sulfurtransferase -
EXA04_RS06920 (1403403) 1403403..1408364 + 4962 WP_001696560.1 alpha2-macroglobulin -
EXA04_RS06925 (1408365) 1408365..1410677 + 2313 WP_001137684.1 peptidoglycan glycosyltransferase PbpC -
EXA04_RS06930 (1410826) 1410826..1411257 + 432 WP_001696558.1 nucleoside-diphosphate kinase -
EXA04_RS06935 (1411407) 1411407..1412561 + 1155 WP_000003317.1 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN -
EXA04_RS06940 (1412846) 1412846..1413859 + 1014 WP_001090844.1 cytoskeleton protein RodZ -
EXA04_RS06945 (1413886) 1413886..1415004 + 1119 WP_000551820.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
EXA04_RS06950 (1415115) 1415115..1416389 + 1275 WP_001107180.1 histidine--tRNA ligase -
EXA04_RS06955 (1416407) 1416407..1417027 + 621 WP_000409205.1 ancillary SecYEG translocon subunit YfgM -
EXA04_RS06960 (1417038) 1417038..1418216 + 1179 WP_001177043.1 outer membrane protein assembly factor BamB -
EXA04_RS06965 (1418334) 1418334..1419806 + 1473 WP_000249410.1 ribosome biogenesis GTPase Der -
EXA04_RS06970 (1419875) 1419875..1420090 + 216 WP_001297332.1 zinc ribbon domain-containing protein -
EXA04_RS06975 (1420087) 1420087..1421457 - 1371 WP_000937933.1 exodeoxyribonuclease VII large subunit -
EXA04_RS06980 (1421619) 1421619..1423085 + 1467 WP_001299507.1 IMP dehydrogenase -
EXA04_RS06985 (1423154) 1423154..1424731 + 1578 WP_000138282.1 glutamine-hydrolyzing GMP synthase -
EXA04_RS06990 (1425040) 1425040..1426227 + 1188 WP_216317250.1 hypothetical protein ; Integrase Integrase
EXA04_RS06995 (1426276) 1426276..1428237 + 1962 WP_000687641.1 AAA family ATPase -
EXA04_RS07000 (1428234) 1428234..1430099 + 1866 WP_000199052.1 ATP-dependent helicase -
EXA04_RS07005 (1430223) 1430223..1431266 - 1044 WP_001342896.1 hypothetical protein -
EXA04_RS07010 (1431362) 1431362..1431583 + 222 WP_024168710.1 AlpA family phage regulatory protein -
EXA04_RS07015 (1431588) 1431588..1432451 + 864 WP_001162383.1 helicase RepA family protein -
EXA04_RS07020 (1432438) 1432438..1433193 + 756 WP_000206936.1 hypothetical protein -
EXA04_RS07025 (1434312) 1434312..1435088 + 777 WP_001174503.1 P-type conjugative transfer protein TrbJ -
EXA04_RS07030 (1435091) 1435091..1435288 + 198 WP_000790452.1 hypothetical protein -
EXA04_RS07035 (1435291) 1435291..1436586 + 1296 WP_216317252.1 P-type conjugative transfer protein TrbL -
EXA04_RS07040 (1436642) 1436642..1436839 + 198 WP_001076796.1 hypothetical protein -
EXA04_RS07045 (1436860) 1436860..1437114 + 255 WP_000395519.1 hypothetical protein -
EXA04_RS07050 (1437187) 1437187..1437429 + 243 WP_000213950.1 type I toxin-antitoxin system ptaRNA1 family toxin -
EXA04_RS07055 (1437462) 1437462..1439156 - 1695 WP_000606117.1 LA2681 family HEPN domain-containing protein -
EXA04_RS07060 (1439688) 1439688..1440227 - 540 WP_000755179.1 DUF5384 family protein -
EXA04_RS07065 (1440243) 1440243..1440761 - 519 WP_001295476.1 glycine zipper 2TM domain-containing protein -
EXA04_RS07070 (1441072) 1441072..1441263 - 192 WP_000076001.1 YfgG family protein -
EXA04_RS07075 (1441281) 1441281..1441433 + 153 WP_000017552.1 hypothetical protein -
EXA04_RS07080 (1441615) 1441615..1443858 + 2244 WP_000772726.1 hypothetical protein VF
EXA04_RS07085 (1443897) 1443897..1445438 - 1542 WP_001121363.1 exopolyphosphatase -
EXA04_RS07090 (1445443) 1445443..1447509 - 2067 WP_000529576.1 polyphosphate kinase 1 -
EXA04_RS07095 (1447680) 1447680..1448318 - 639 WP_001028614.1 phosphoribosylglycinamide formyltransferase -
EXA04_RS07100 (1448318) 1448318..1449355 - 1038 WP_001295474.1 hypothetical protein VF
EXA04_RS07105 (1449680) 1449680..1450306 + 627 WP_001295473.1 uracil phosphoribosyltransferase -
EXA04_RS07110 (1450392) 1450392..1451681 + 1290 WP_000198328.1 uracil permease -
EXA04_RS07115 (1451776) 1451776..1452477 + 702 WP_001307333.1 DnaA inactivator Hda -
EXA04_RS07120 (1452615) 1452615..1452974 - 360 WP_000166467.1 arsenate reductase (glutaredoxin) -
EXA04_RS07125 (1452995) 1452995..1454458 - 1464 WP_000489667.1 beta-barrel assembly-enhancing protease -
EXA04_RS07130 (1454671) 1454671..1455732 + 1062 WP_000892044.1 AI-2E family transporter -
EXA04_RS07135 (1455770) 1455770..1456618 - 849 WP_001244724.1 formate transporter FocB -
EXA04_RS07140 (1456640) 1456640..1458652 - 2013 WP_001251569.1 hypothetical protein VF
EXA04_RS07145 (1458682) 1458682..1459095 - 414 WP_000133936.1 hydrogenase 4 assembly chaperone HyfJ -
EXA04_RS07150 (1459088) 1459088..1459846 - 759 WP_000075569.1 hydrogenase 4 catalytic subunit HyfI -
EXA04_RS07155 (1459843) 1459843..1460388 - 546 WP_000916058.1 hydrogenase 4 subunit H -
EXA04_RS07160 (1460398) 1460398..1462065 - 1668 WP_001102276.1 hydrogenase 4 catalytic subunit HyfG -
EXA04_RS07165 (1462055) 1462055..1463636 - 1582 Protein_1401 hydrogenase 4 subunit F -
EXA04_RS07170 (1463641) 1463641..1464291 - 651 WP_000147987.1 hydrogenase 4 membrane subunit -
EXA04_RS07175 (1464303) 1464303..1465534 - 1232 Protein_1403 hydrogenase 4 subunit D -
EXA04_RS07180 (1465551) 1465551..1466498 - 948 WP_001317255.1 hydrogenase 4 subunit HyfC -
EXA04_RS07185 (1466509) 1466509..1468277 - 1769 Protein_1405 hydrogenase 4 subunit B -
EXA04_RS07190 (1468526) 1468526..1469143 - 618 WP_001299064.1 hydrogenase 4 subunit HyfA -
EXA04_RS07195 (1469396) 1469396..1469866 - 471 WP_001068682.1 thioredoxin-dependent thiol peroxidase -
EXA04_RS07200 (1469866) 1469866..1470438 - 573 WP_000176187.1 glycine cleavage system transcriptional repressor -
EXA04_RS07205 (1470584) 1470584..1471462 + 879 WP_001295469.1 4-hydroxy-tetrahydrodipicolinate synthase -
EXA04_RS07210 (1471479) 1471479..1472513 + 1035 WP_001297320.1 outer membrane protein assembly factor BamC -
EXA04_RS07215 (1472726) 1472726..1473439 + 714 WP_001295467.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
EXA04_RS07220 (1473594) 1473594..1473821 + 228 WP_001696518.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
EXA04_RS07225 (1473821) 1473821..1474219 + 399 WP_000911329.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
EXA04_RS07230 (1474366) 1474366..1475229 + 864 WP_001267498.1 neutral zinc metallopeptidase -
EXA04_RS07235 (1475244) 1475244..1477259 + 2016 WP_001388162.1 tRNA cytosine(34) acetyltransferase TmcA -
EXA04_RS07240 (1477333) 1477333..1478031 + 699 WP_000679812.1 esterase -
EXA04_RS07245 (1478112) 1478112..1478312 - 201 WP_000383836.1 YpfN family protein -
EXA04_RS07250 (1478340) 1478340..1479467 - 1128 WP_001277801.1 succinyl-diaminopimelate desuccinylase -
EXA04_RS07255 (1479471) 1479471..1479827 - 357 WP_000258247.1 ArsC family reductase -
EXA04_RS07260 (1480208) 1480208..1480267 + 60 WP_001386977.1 protein YpfM -
EXA04_RS07265 (1480366) 1480366..1483479 - 3114 WP_001760194.1 hypothetical protein VF
EXA04_RS07270 (1483643) 1483643..1485343 - 1701 WP_000636129.1 nitrate/nitrite two-component system sensor histidine kinase NarQ -
EXA04_RS07275 (1485549) 1485549..1487528 + 1980 WP_001078871.1 formate-dependent uric acid utilization protein AegA -
EXA04_RS07280 (1487596) 1487596..1488171 + 576 WP_000193711.1 GDP-mannose pyrophosphatase NudK -
EXA04_RS07285 (1488297) 1488297..1489340 + 1044 WP_001270528.1 DUF1176 domain-containing protein -
EXA04_RS07290 (1489436) 1489436..1491439 - 2004 WP_216317254.1 transketolase -
EXA04_RS07295 (1491459) 1491459..1492409 - 951 WP_001003709.1 transaldolase -
EXA04_RS07300 (1492698) 1492698..1494977 + 2280 WP_000342642.1 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase -
EXA04_RS07305 (1495270) 1495270..1495605 + 336 WP_000356956.1 ethanolamine utilization microcompartment protein EutS -
EXA04_RS07310 (1495618) 1495618..1496097 + 480 WP_000820764.1 ethanolamine utilization acetate kinase EutP -
EXA04_RS07315 (1496072) 1496072..1496773 + 702 WP_033801077.1 ethanolamine utilization acetate kinase EutQ -
EXA04_RS07320 (1496770) 1496770..1497573 + 804 WP_000651298.1 ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT -
EXA04_RS07325 (1497570) 1497570..1498586 + 1017 WP_000582977.1 phosphate acetyltransferase -
EXA04_RS07330 (1498625) 1498625..1498918 + 294 WP_000387713.1 ethanolamine utilization microcompartment protein EutM -
EXA04_RS07335 (1499025) 1499025..1499312 + 288 WP_000762196.1 ethanolamine utilization microcompartment protein EutN -
EXA04_RS07340 (1499324) 1499324..1500727 + 1404 WP_001075711.1 hypothetical protein VF
EXA04_RS07345 (1500738) 1500738..1501574 + 837 WP_000929729.1 ethanolamine utilization protein EutJ -
EXA04_RS07350 (1501564) 1501564..1502751 + 1188 WP_001315777.1 ethanolamine utilization ethanol dehydrogenase EutG -
EXA04_RS07355 (1502868) 1502868..1504094 + 1227 WP_000512372.1 ethanolamine utilization protein EutH -
EXA04_RS07360 (1504091) 1504091..1505494 + 1404 WP_001097478.1 ethanolamine ammonia-lyase reactivating factor EutA -
EXA04_RS07365 (1505506) 1505506..1506867 + 1362 WP_000769961.1 ethanolamine ammonia-lyase subunit alpha -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance