MGE detailed information
MGE type: Prophage MGE length: 32211 bp
Accession: NZ_CP035826 Location: 4617407..4649617 Organism: Escherichia coli strain 67-1 Replicon: chromosome
Accession: NZ_CP035826 Location: 4617407..4649617 Organism: Escherichia coli strain 67-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA05_RS22410 (4613921) | 4613921..4614667 | + | 747 | WP_001324973.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EXA05_RS22415 (4614756) | 4614756..4615442 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| EXA05_RS22420 (4615619) | 4615619..4615822 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EXA05_RS22425 (4615858) | 4615858..4617318 | - | 1461 | WP_000527780.1 | mannitol dehydrogenase family protein | - |
| EXA05_RS22430 (4617407) | 4617407..4618690 | - | 1284 | Protein_4394 | MHS family MFS transporter YdfJ | - |
| EXA05_RS22440 (4620630) | 4620630..4620743 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| EXA05_RS22445 (4620812) | 4620812..4621045 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EXA05_RS22450 (4621362) | 4621362..4621952 | + | 591 | WP_000086530.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EXA05_RS22455 (4622050) | 4622050..4622172 | - | 123 | Protein_4399 | tail fiber assembly protein | - |
| EXA05_RS22460 (4622224) | 4622224..4625508 | - | 3285 | WP_000279079.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EXA05_RS22465 (4625573) | 4625573..4626157 | - | 585 | WP_029379692.1 | Outer membrane protein X | VF |
| EXA05_RS22470 (4626121) | 4626121..4626375 | - | 255 | Protein_4402 | DUF1441 family protein | - |
| EXA05_RS22475 (4626455) | 4626455..4627132 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| EXA05_RS22480 (4627132) | 4627132..4627479 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| EXA05_RS22485 (4627499) | 4627499..4629070 | + | 1572 | WP_001748001.1 | IS66 family transposase ISCro1 | Transposase |
| EXA05_RS22490 (4629655) | 4629655..4629861 | - | 207 | WP_001031431.1 | hypothetical protein | - |
| EXA05_RS22495 (4630162) | 4630162..4630593 | + | 432 | WP_000035576.1 | DUF1398 domain-containing protein | - |
| EXA05_RS22500 (4630745) | 4630745..4630918 | - | 174 | WP_001019139.1 | addiction module toxin, GnsA/GnsB family | - |
| EXA05_RS22505 (4631090) | 4631090..4631320 | - | 231 | WP_000720962.1 | protein YnfN | - |
| EXA05_RS22510 (4631325) | 4631325..4631390 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| EXA05_RS22515 (4631393) | 4631393..4631581 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EXA05_RS22520 (4631592) | 4631592..4631804 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EXA05_RS22525 (4632166) | 4632166..4632663 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EXA05_RS22530 (4632660) | 4632660..4633193 | - | 534 | WP_001092971.1 | lysozyme | - |
| EXA05_RS22535 (4633190) | 4633190..4633501 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EXA05_RS22540 (4633506) | 4633506..4633721 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EXA05_RS22545 (4633941) | 4633941..4634111 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EXA05_RS22550 (4634475) | 4634475..4634690 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EXA05_RS22555 (4634991) | 4634991..4635203 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EXA05_RS22560 (4635258) | 4635258..4635347 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EXA05_RS22565 (4635625) | 4635625..4636377 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EXA05_RS22570 (4636391) | 4636391..4637440 | - | 1050 | WP_097343536.1 | DUF968 domain-containing protein | - |
| EXA05_RS22575 (4637442) | 4637442..4637702 | - | 261 | WP_097343537.1 | hypothetical protein | - |
| EXA05_RS22580 (4637722) | 4637722..4638930 | - | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| EXA05_RS22585 (4639110) | 4639110..4639361 | - | 252 | WP_000980994.1 | protein Rem | - |
| EXA05_RS22590 (4639578) | 4639578..4639733 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EXA05_RS22595 (4639805) | 4639805..4640092 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EXA05_RS22600 (4640092) | 4640092..4640331 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EXA05_RS22605 (4640356) | 4640356..4640565 | + | 210 | Protein_4429 | protein YdfV | - |
| EXA05_RS22610 (4640564) | 4640564..4640692 | - | 129 | Protein_4430 | dicB transcriptional regulator DicC | - |
| EXA05_RS22615 (4640776) | 4640776..4641183 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EXA05_RS22620 (4641350) | 4641350..4641505 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EXA05_RS26980 (4641507) | 4641507..4641608 | + | 102 | Protein_4433 | protein YdfB | - |
| EXA05_RS22630 (4642569) | 4642569..4642757 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EXA05_RS22635 (4642754) | 4642754..4642945 | + | 192 | WP_001083278.1 | lysis protein YdfD | - |
| EXA05_RS22640 (4643039) | 4643039..4645510 | + | 2472 | WP_000048316.1 | exonuclease | - |
| EXA05_RS22645 (4645583) | 4645583..4645834 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| EXA05_RS22650 (4645869) | 4645869..4646957 | + | 1089 | WP_000877003.1 | IS91 family transposase ISTha3 | Transposase |
| EXA05_RS22655 (4647020) | 4647020..4648182 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| EXA05_RS22660 (4648210) | 4648210..4648410 | + | 201 | Protein_4440 | site-specific integrase | - |
| EXA05_RS22665 (4648598) | 4648598..4649617 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EXA05_RS22670 (4649629) | 4649629..4650843 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EXA05_RS22675 (4651049) | 4651049..4651375 | - | 327 | WP_001295395.1 | YnfA family protein | - |
| EXA05_RS22680 (4651510) | 4651510..4651851 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| EXA05_RS22685 (4651886) | 4651886..4652446 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| EXA05_RS22690 (4652449) | 4652449..4653159 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EXA05_RS22695 (4653267) | 4653267..4653572 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|