MGE detailed information
MGE type: Prophage MGE length: 32841 bp
Accession: NZ_CP035822 Location: 1075688..1108528 Organism: Escherichia coli strain WS4437A-1 Replicon: chromosome
Accession: NZ_CP035822 Location: 1075688..1108528 Organism: Escherichia coli strain WS4437A-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA06_RS05245 (1071282) | 1071282..1071485 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EXA06_RS05250 (1071520) | 1071520..1072980 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| EXA06_RS05255 (1073069) | 1073069..1074352 | - | 1284 | Protein_1026 | MHS family MFS transporter YdfJ | - |
| EXA06_RS05260 (1074956) | 1074956..1075069 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| EXA06_RS05265 (1075138) | 1075138..1075371 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EXA06_RS05270 (1075688) | 1075688..1076278 | + | 591 | WP_000086522.1 | recombinase family protein | - |
| EXA06_RS05275 (1076376) | 1076376..1076951 | - | 576 | WP_001413248.1 | tail fiber assembly protein | - |
| EXA06_RS05280 (1076951) | 1076951..1077163 | - | 213 | Protein_1031 | hypothetical protein | - |
| EXA06_RS05285 (1077250) | 1077250..1079187 | - | 1938 | Protein_1032 | host specificity protein J | - |
| EXA06_RS05290 (1079184) | 1079184..1079327 | - | 144 | Protein_1033 | hypothetical protein | - |
| EXA06_RS05295 (1079320) | 1079320..1079754 | - | 435 | WP_000459464.1 | phage tail assembly protein T | - |
| EXA06_RS24515 (1079736) | 1079736..1080089 | - | 354 | Protein_1035 | phage minor tail protein G | - |
| EXA06_RS24520 (1080087) | 1080087..1080419 | - | 333 | Protein_1036 | S49 family peptidase | - |
| EXA06_RS05305 (1080419) | 1080419..1081084 | - | 666 | Protein_1037 | phage portal protein | - |
| EXA06_RS05310 (1081081) | 1081081..1081287 | - | 207 | WP_000198153.1 | gpW family protein | - |
| EXA06_RS05315 (1081284) | 1081284..1081706 | - | 423 | WP_001737163.1 | phage terminase large subunit family protein | - |
| EXA06_RS05320 (1081616) | 1081616..1082248 | - | 633 | WP_077770029.1 | terminase small subunit | - |
| EXA06_RS05325 (1082355) | 1082355..1083032 | + | 678 | WP_001339397.1 | IS66-like element accessory protein TnpA | - |
| EXA06_RS05330 (1083032) | 1083032..1083379 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EXA06_RS05335 (1083399) | 1083399..1084970 | + | 1572 | WP_216350065.1 | IS66-like element ISCro1 family transposase | - |
| EXA06_RS05340 (1085344) | 1085344..1085577 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EXA06_RS05345 (1085635) | 1085635..1085748 | + | 114 | Protein_1045 | DUF1398 family protein | - |
| EXA06_RS05350 (1085865) | 1085865..1087093 | + | 1229 | WP_164544914.1 | IS3 family transposase | - |
| EXA06_RS05355 (1087107) | 1087107..1087406 | + | 300 | Protein_1047 | DUF1398 family protein | - |
| EXA06_RS05360 (1087558) | 1087558..1087732 | - | 175 | Protein_1048 | addiction module toxin, GnsA/GnsB family | - |
| EXA06_RS05365 (1087904) | 1087904..1088059 | - | 156 | WP_001309517.1 | protein YnfN | - |
| EXA06_RS05370 (1088139) | 1088139..1088204 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| EXA06_RS05375 (1088207) | 1088207..1088395 | - | 189 | WP_071703999.1 | cold-shock protein | - |
| EXA06_RS05380 (1088406) | 1088406..1088618 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EXA06_RS05385 (1088981) | 1088981..1089478 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EXA06_RS05390 (1089475) | 1089475..1090008 | - | 534 | WP_001092971.1 | lysozyme | - |
| EXA06_RS05395 (1090005) | 1090005..1090316 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EXA06_RS05400 (1090321) | 1090321..1090536 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EXA06_RS05405 (1090756) | 1090756..1090926 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EXA06_RS05410 (1091290) | 1091290..1091505 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EXA06_RS05415 (1091806) | 1091806..1092018 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EXA06_RS05420 (1092073) | 1092073..1092162 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EXA06_RS05425 (1092440) | 1092440..1093192 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EXA06_RS05430 (1093206) | 1093206..1094255 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EXA06_RS05435 (1094257) | 1094257..1094535 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EXA06_RS05440 (1094602) | 1094602..1094853 | - | 252 | WP_000980994.1 | protein Rem | - |
| EXA06_RS05445 (1095070) | 1095070..1095225 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EXA06_RS05450 (1095297) | 1095297..1095584 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EXA06_RS05455 (1095584) | 1095584..1095823 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EXA06_RS05460 (1095848) | 1095848..1096153 | + | 306 | WP_001326990.1 | protein YdfV | - |
| EXA06_RS05465 (1096356) | 1096356..1096688 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| EXA06_RS24525 (1097125) | 1097125..1097274 | - | 150 | WP_011443592.1 | protein YdfW | - |
| EXA06_RS05470 (1097395) | 1097395..1098417 | - | 1023 | Protein_1071 | ISNCY family transposase | - |
| EXA06_RS05475 (1099207) | 1099207..1099494 | - | 288 | Protein_1072 | hypothetical protein | - |
| EXA06_RS05480 (1099972) | 1099972..1100461 | - | 490 | Protein_1073 | class I SAM-dependent methyltransferase | - |
| EXA06_RS05485 (1100458) | 1100458..1100709 | - | 252 | Protein_1074 | DUF977 family protein | - |
| EXA06_RS05490 (1100699) | 1100699..1102681 | + | 1983 | Protein_1075 | 3'-5' exoribonuclease | - |
| EXA06_RS05495 (1102754) | 1102754..1103005 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| EXA06_RS05500 (1103040) | 1103040..1104320 | + | 1281 | WP_001413284.1 | site-specific integrase | - |
| EXA06_RS05505 (1104508) | 1104508..1105527 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EXA06_RS05510 (1105539) | 1105539..1105935 | - | 397 | Protein_1079 | hypothetical protein | - |
| EXA06_RS05520 (1106707) | 1106707..1106925 | - | 219 | Protein_1081 | bifunctional D-altronate/D-mannonate dehydratase | - |
| EXA06_RS05525 (1107131) | 1107131..1107457 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| EXA06_RS05530 (1107592) | 1107592..1107933 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EXA06_RS05535 (1107968) | 1107968..1108528 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EXA06_RS05540 (1108531) | 1108531..1109241 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EXA06_RS05545 (1109349) | 1109349..1109654 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EXA06_RS05550 (1109853) | 1109853..1112279 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|