MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP035817 Location: 4760675..4770026 Organism: Escherichia coli strain E7476 Replicon: chromosome
Accession: NZ_CP035817 Location: 4760675..4770026 Organism: Escherichia coli strain E7476 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA08_RS23370 (4755836) | 4755836..4757137 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| EXA08_RS23375 (4757253) | 4757253..4757591 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| EXA08_RS23380 (4757567) | 4757567..4759264 | + | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| EXA08_RS23385 (4759301) | 4759301..4759876 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| EXA08_RS23395 (4760675) | 4760675..4762213 | + | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| EXA08_RS23400 (4762579) | 4762579..4763913 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| EXA08_RS23405 (4763993) | 4763993..4766140 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| EXA08_RS23410 (4766199) | 4766199..4767656 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| EXA08_RS23415 (4767893) | 4767893..4769410 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| EXA08_RS23420 (4769529) | 4769529..4769702 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| EXA08_RS23425 (4769730) | 4769730..4770026 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| EXA08_RS23430 (4770253) | 4770253..4770525 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| EXA08_RS23435 (4770537) | 4770537..4770767 | - | 231 | WP_000371698.1 | 4Fe-4S mono-cluster protein YjdI | - |
| EXA08_RS23440 (4770948) | 4770948..4772579 | + | 1632 | WP_001216461.1 | sensor histidine kinase | - |
| EXA08_RS23445 (4772576) | 4772576..4773295 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |