MGE detailed information
MGE type: Conjugative plasmid MGE length: 66338 bp
Accession: NZ_CP035815 Location: 1..66338 Organism: Escherichia coli strain B7A Replicon: plasmid pB7A_66
Accession: NZ_CP035815 Location: 1..66338 Organism: Escherichia coli strain B7A Replicon: plasmid pB7A_66
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA09_RS25210 (68) | 68..262 | - | 195 | Protein_1 | hypothetical protein | - |
| EXA09_RS25215 (358) | 358..663 | - | 306 | WP_077628632.1 | hypothetical protein | - |
| EXA09_RS25220 (667) | 667..1089 | - | 423 | WP_001297831.1 | plasmid partitioning/stability family protein | - |
| EXA09_RS25225 (1092) | 1092..2072 | - | 981 | WP_042815943.1 | plasmid segregation protein ParM | - |
| EXA09_RS25230 (2277) | 2277..2414 | - | 138 | Protein_5 | IS66 family transposase IS682 | Transposase |
| EXA09_RS25235 (2411) | 2411..2713 | - | 303 | WP_235837087.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EXA09_RS25240 (2917) | 2917..3066 | - | 150 | Protein_7 | IS3 family transposase ISKpn37 | Transposase |
| EXA09_RS25245 (3321) | 3321..4549 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| EXA09_RS25250 (4910) | 4910..5128 | + | 219 | WP_071778586.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| EXA09_RS25255 (5423) | 5423..5839 | + | 417 | Protein_10 | IS66 family transposase ISCro1 | Transposase |
| EXA09_RS25260 (5900) | 5900..6961 | - | 1062 | Protein_11 | IS21 family transposase ISSso4 | Transposase |
| EXA09_RS25265 (7262) | 7262..7753 | - | 492 | Protein_12 | IS91 family transposase ISSbo1 | Transposase |
| EXA09_RS25270 (7734) | 7734..8006 | - | 273 | WP_042815951.1 | hypothetical protein | - |
| EXA09_RS25275 (8323) | 8323..9099 | + | 777 | WP_071778579.1 | Heat-labile enterotoxin A chain | VF |
| EXA09_RS25280 (9096) | 9096..9469 | + | 374 | Protein_15 | Heat-labile enterotoxin B chain | VF |
| EXA09_RS25290 (11294) | 11294..11443 | + | 150 | Protein_17 | IS3 family transposase ISKpn37 | Transposase |
| EXA09_RS25295 (11647) | 11647..11949 | + | 303 | WP_235837087.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| EXA09_RS25300 (11946) | 11946..12197 | + | 252 | Protein_19 | IS66 family transposase IS682 | Transposase |
| EXA09_RS26150 (12192) | 12192..12346 | + | 155 | Protein_20 | transposase | - |
| EXA09_RS25310 (12380) | 12380..12556 | - | 177 | Protein_21 | transposase domain-containing protein | - |
| EXA09_RS25315 (12785) | 12785..13567 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| EXA09_RS25320 (13564) | 13564..14586 | - | 1023 | WP_001297099.1 | IS21 family transposase IS100kyp | Transposase |
| EXA09_RS25325 (14812) | 14812..15294 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| EXA09_RS25330 (15411) | 15411..16259 | - | 849 | WP_042815954.1 | 3'-5' exonuclease | - |
| EXA09_RS25335 (16305) | 16305..16583 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| EXA09_RS25340 (16583) | 16583..16852 | - | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| EXA09_RS25345 (17768) | 17768..18625 | - | 858 | WP_000131014.1 | incFII family plasmid replication initiator RepA | - |
| EXA09_RS25350 (18618) | 18618..18692 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EXA09_RS25355 (18928) | 18928..19182 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| EXA09_RS25360 (19422) | 19422..20012 | - | 591 | WP_001297502.1 | DUF2726 domain-containing protein | - |
| EXA09_RS25365 (20164) | 20164..20790 | - | 627 | WP_000794191.1 | NYN domain-containing protein | - |
| EXA09_RS25370 (21202) | 21202..21411 | - | 210 | WP_001297500.1 | hypothetical protein | - |
| EXA09_RS25375 (21542) | 21542..22102 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| EXA09_RS25380 (22205) | 22205..23065 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| EXA09_RS25385 (23124) | 23124..23870 | - | 747 | WP_000205711.1 | conjugal transfer pilus acetylase TraX | - |
| EXA09_RS25390 (23890) | 23890..29160 | - | 5271 | WP_001297511.1 | Multifunctional conjugation protein TraI | Relaxase |
| EXA09_RS25395 (29160) | 29160..31376 | - | 2217 | WP_001297509.1 | type IV conjugative transfer system coupling protein TraD | - |
| EXA09_RS25400 (31427) | 31427..32164 | - | 738 | WP_000199908.1 | hypothetical protein | - |
| EXA09_RS25405 (32367) | 32367..33077 | - | 711 | WP_235839140.1 | conjugal transfer complement resistance protein TraT | - |
| EXA09_RS25410 (33130) | 33130..33627 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| EXA09_RS25415 (33646) | 33646..36486 | - | 2841 | WP_001297503.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| EXA09_RS25420 (36483) | 36483..37856 | - | 1374 | WP_001381324.1 | conjugal transfer pilus assembly protein TraH | - |
| EXA09_RS25425 (37856) | 37856..38218 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| EXA09_RS25430 (38148) | 38148..38692 | - | 545 | Protein_45 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EXA09_RS25435 (38679) | 38679..38915 | - | 237 | WP_044311305.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EXA09_RS25440 (39085) | 39085..39828 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EXA09_RS25445 (39821) | 39821..40078 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| EXA09_RS25450 (40105) | 40105..41913 | - | 1809 | WP_001297501.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EXA09_RS25455 (41910) | 41910..42332 | - | 423 | WP_001297512.1 | HNH endonuclease signature motif containing protein | - |
| EXA09_RS25460 (42357) | 42357..42728 | - | 372 | WP_000056340.1 | hypothetical protein | - |
| EXA09_RS25465 (42725) | 42725..43363 | - | 639 | WP_001297508.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EXA09_RS25470 (43556) | 43556..43795 | + | 240 | WP_001064017.1 | hypothetical protein | - |
| EXA09_RS25475 (43792) | 43792..43971 | - | 180 | WP_001750891.1 | hypothetical protein | - |
| EXA09_RS25480 (44063) | 44063..44152 | - | 90 | Protein_55 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EXA09_RS25485 (44761) | 44761..45069 | - | 309 | WP_001297510.1 | hypothetical protein | - |
| EXA09_RS25490 (45096) | 45096..46088 | - | 993 | WP_000830189.1 | conjugal transfer pilus assembly protein TraU | - |
| EXA09_RS25495 (46085) | 46085..46717 | - | 633 | WP_001297504.1 | type-F conjugative transfer system protein TraW | - |
| EXA09_RS25500 (46714) | 46714..47100 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| EXA09_RS25505 (47097) | 47097..49727 | - | 2631 | WP_001297499.1 | type IV secretion system protein TraC | - |
| EXA09_RS25510 (49786) | 49786..50145 | - | 360 | Protein_61 | hypothetical protein | - |
| EXA09_RS25515 (50138) | 50138..50359 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| EXA09_RS25520 (50494) | 50494..51009 | - | 516 | WP_000809905.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EXA09_RS25525 (51006) | 51006..51257 | - | 252 | WP_001038347.1 | conjugal transfer protein TrbG | - |
| EXA09_RS25530 (51250) | 51250..51570 | - | 321 | WP_001057295.1 | conjugal transfer protein TrbD | - |
| EXA09_RS25535 (51557) | 51557..52127 | - | 571 | Protein_66 | conjugal transfer protein TraP | - |
| EXA09_RS25540 (52117) | 52117..53568 | - | 1452 | WP_000146637.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| EXA09_RS25545 (53568) | 53568..54296 | - | 729 | WP_001297772.1 | type-F conjugative transfer system secretin TraK | - |
| EXA09_RS25550 (54283) | 54283..54849 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| EXA09_RS25555 (54871) | 54871..55182 | - | 312 | WP_000012116.1 | type IV conjugative transfer system protein TraL | - |
| EXA09_RS25560 (55197) | 55197..55562 | - | 366 | WP_001099002.1 | type IV conjugative transfer system pilin TraA | - |
| EXA09_RS25565 (55595) | 55595..55822 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| EXA09_RS25570 (55959) | 55959..56630 | - | 672 | WP_000283565.1 | conjugal transfer transcriptional regulator TraJ | - |
| EXA09_RS25575 (56824) | 56824..57207 | - | 384 | WP_001297768.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EXA09_RS25580 (57635) | 57635..58132 | + | 498 | WP_032315912.1 | hypothetical protein | VF |
| EXA09_RS25585 (58426) | 58426..59247 | - | 822 | WP_042815938.1 | DUF932 domain-containing protein | - |
| EXA09_RS25590 (59366) | 59366..59652 | - | 287 | Protein_77 | hypothetical protein | - |
| EXA09_RS25595 (59654) | 59654..59851 | + | 198 | Protein_78 | hypothetical protein | - |
| EXA09_RS25600 (60305) | 60305..60427 | - | 123 | WP_223200913.1 | Hok/Gef family protein | - |
| EXA09_RS26155 (60372) | 60372..60524 | - | 153 | Protein_80 | FlmC family protein | - |
| - (60512) | 60512..60722 | + | 211 | NuclAT_0 | - | - |
| - (60512) | 60512..60725 | - | 214 | NuclAT_0 | - | - |
| - (60512) | 60512..60725 | - | 214 | NuclAT_0 | - | - |
| - (60512) | 60512..60725 | - | 214 | NuclAT_0 | - | - |
| - (60512) | 60512..60725 | - | 214 | NuclAT_0 | - | - |
| EXA09_RS25605 (60674) | 60674..60945 | - | 272 | Protein_81 | theronine dehydrogenase | - |
| EXA09_RS25610 (60942) | 60942..61661 | - | 720 | WP_001297770.1 | plasmid SOS inhibition protein A | - |
| EXA09_RS25615 (61658) | 61658..62092 | - | 435 | WP_001297769.1 | conjugation system SOS inhibitor PsiB | - |
| EXA09_RS25620 (62147) | 62147..64105 | - | 1959 | WP_042815941.1 | ParB/RepB/Spo0J family partition protein | - |
| EXA09_RS25625 (64166) | 64166..64399 | - | 234 | WP_001297827.1 | DUF905 domain-containing protein | - |
| EXA09_RS25630 (64456) | 64456..64983 | - | 528 | WP_000290787.1 | single-stranded DNA-binding protein | - |
| EXA09_RS25635 (65285) | 65285..65712 | + | 428 | Protein_87 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|