MGE detailed information
MGE type: Conjugative plasmid MGE length: 99955 bp
Accession: NZ_CP035813 Location: 1..99955 Organism: Escherichia coli strain B7A Replicon: plasmid pB7A_99
Accession: NZ_CP035813 Location: 1..99955 Organism: Escherichia coli strain B7A Replicon: plasmid pB7A_99
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA09_RS24190 | 387..1682 | + | 1296 | WP_000129885.1 | type 4b pilus protein PilO2 | - |
| EXA09_RS24195 | 1672..2130 | + | 459 | WP_000095884.1 | hypothetical protein | VF |
| EXA09_RS24200 | 2233..3741 | + | 1509 | WP_001297016.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| EXA09_RS24205 | 3743..4837 | + | 1095 | WP_000697154.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EXA09_RS24210 | 4899..5435 | + | 537 | WP_000111521.1 | hypothetical protein | VF |
| EXA09_RS24215 | 5480..5965 | + | 486 | WP_001080767.1 | hypothetical protein | VF |
| EXA09_RS24220 | 5981..6607 | + | 627 | WP_000939938.1 | prepilin peptidase | - |
| EXA09_RS24225 | 6625..7818 | + | 1194 | WP_001297011.1 | hypothetical protein | VF |
| EXA09_RS24230 | 7875..8138 | - | 264 | Protein_9 | transposase | - |
| EXA09_RS24235 | 8076..8228 | + | 153 | WP_001399803.1 | hypothetical protein | - |
| EXA09_RS24240 | 8379..9203 | + | 825 | WP_001238934.1 | conjugal transfer protein TraE | - |
| EXA09_RS24245 | 9289..10491 | + | 1203 | WP_000976355.1 | conjugal transfer protein TraF | - |
| EXA09_RS24250 | 10551..11135 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| EXA09_RS24255 | 11530..11988 | + | 459 | WP_001079806.1 | hypothetical protein | VF |
| EXA09_RS24260 | 11985..12815 | + | 831 | WP_001297031.1 | hypothetical protein | VF |
| EXA09_RS24265 | 12799..13947 | + | 1149 | WP_001297036.1 | putative protein YggR | VF |
| EXA09_RS24270 | 13944..14234 | + | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| EXA09_RS24275 | 14298..18359 | + | 4062 | WP_000842449.1 | DUF5710 domain-containing protein | - |
| EXA09_RS24280 | 18376..18726 | + | 351 | WP_001056367.1 | hypothetical protein | - |
| EXA09_RS24285 | 18738..19433 | + | 696 | WP_001287260.1 | DotI/IcmL family type IV secretion protein | - |
| EXA09_RS24290 | 19444..20403 | + | 960 | WP_000547388.1 | hypothetical protein | VF |
| EXA09_RS24295 | 20407..21738 | + | 1332 | WP_001297043.1 | conjugal transfer protein TraO | - |
| EXA09_RS24300 | 21735..22448 | + | 714 | WP_000787000.1 | conjugal transfer protein TraP | - |
| EXA09_RS24305 | 22445..22975 | + | 531 | WP_000987023.1 | conjugal transfer protein TraQ | - |
| EXA09_RS24310 | 23022..23420 | + | 399 | WP_000088813.1 | hypothetical protein | - |
| EXA09_RS26120 | 23477..23629 | + | 153 | Protein_26 | TraS | - |
| EXA09_RS24320 | 23643..24461 | + | 819 | WP_074420652.1 | conjugal transfer protein TraT | - |
| EXA09_RS24325 | 24756..27800 | + | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| EXA09_RS24330 | 27800..28420 | + | 621 | WP_000286854.1 | hypothetical protein | - |
| EXA09_RS24335 | 28378..29583 | + | 1206 | WP_024168872.1 | conjugal transfer protein TraW | - |
| EXA09_RS24340 | 29580..30149 | + | 570 | WP_001297032.1 | conjugal transfer protein TraX | - |
| EXA09_RS24345 | 30224..32389 | + | 2166 | WP_001297018.1 | DotA/TraY family protein | - |
| EXA09_RS24350 | 32477..33130 | + | 654 | WP_024168871.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EXA09_RS24355 | 33601..34224 | - | 624 | WP_001155252.1 | helix-turn-helix domain-containing protein | - |
| EXA09_RS24360 | 34389..34742 | + | 354 | WP_001297008.1 | thermonuclease family protein | - |
| EXA09_RS24370 | 35712..36371 | + | 660 | WP_000412211.1 | Chloramphenicol acetyltransferase | ARG |
| EXA09_RS24375 | 36572..36865 | - | 294 | Protein_38 | GNAT family N-acetyltransferase | - |
| EXA09_RS26125 | 37637..37792 | + | 156 | Protein_40 | thermonuclease | - |
| EXA09_RS24385 | 37935..38111 | + | 177 | WP_001054907.1 | hypothetical protein | - |
| EXA09_RS24390 | 38826..40142 | + | 1317 | WP_001297022.1 | IncI1-type conjugal transfer protein TrbA | - |
| EXA09_RS24395 | 40139..41263 | + | 1125 | WP_000152381.1 | DsbC family protein | - |
| EXA09_RS24400 | 41244..43547 | + | 2304 | WP_000077664.1 | F-type conjugative transfer protein TrbC | - |
| EXA09_RS24405 | 44003..44244 | + | 242 | Protein_45 | TonB-dependent receptor | - |
| EXA09_RS24410 | 44342..44773 | - | 432 | WP_072264695.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| EXA09_RS24415 | 44841..47552 | - | 2712 | WP_000991381.1 | Protein TraI | Relaxase |
| EXA09_RS24420 | 47564..47896 | - | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| EXA09_RS24425 | 48129..48464 | + | 336 | WP_000157087.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| EXA09_RS24430 | 48550..49398 | - | 849 | WP_001077014.1 | DUF4942 domain-containing protein | - |
| EXA09_RS24440 | 49978..50229 | + | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| EXA09_RS24445 | 50260..50505 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| EXA09_RS24450 | 50505..51395 | - | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| EXA09_RS24455 | 51392..51781 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| EXA09_RS24460 | 51958..52224 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| EXA09_RS24465 | 52316..52750 | - | 435 | WP_000218862.1 | hypothetical protein | - |
| EXA09_RS24470 | 53481..53981 | - | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| EXA09_RS24475 | 54443..55039 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| EXA09_RS24480 | 55036..55754 | - | 719 | Protein_59 | plasmid SOS inhibition protein A | - |
| EXA09_RS24485 | 55751..56185 | - | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| EXA09_RS24490 | 56240..58198 | - | 1959 | WP_001145482.1 | ParB/RepB/Spo0J family partition protein | - |
| EXA09_RS24495 | 58257..58490 | - | 234 | WP_000006016.1 | DUF905 domain-containing protein | - |
| EXA09_RS24500 | 58548..59075 | - | 528 | WP_001297042.1 | single-stranded DNA-binding protein | - |
| EXA09_RS24505 | 59459..59707 | - | 249 | WP_024186673.1 | hypothetical protein | - |
| EXA09_RS24510 | 59845..60036 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| EXA09_RS24515 | 60033..60455 | - | 423 | WP_000271719.1 | DUF1380 family protein | - |
| EXA09_RS24520 | 60502..60927 | - | 426 | WP_001198879.1 | antirestriction protein | - |
| EXA09_RS24525 | 61342..61956 | - | 615 | WP_001006231.1 | hypothetical protein | - |
| EXA09_RS24530 | 62001..62519 | - | 519 | WP_223350510.1 | DUF1380 family protein | - |
| EXA09_RS24535 | 62449..62670 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| EXA09_RS24540 | 62671..63354 | - | 684 | WP_000086159.1 | DNA methylase | - |
| EXA09_RS24545 | 63431..63742 | - | 312 | WP_032159977.1 | hypothetical protein | - |
| EXA09_RS24550 | 63739..64665 | - | 927 | WP_001134362.1 | DUF1281 domain-containing protein | - |
| EXA09_RS24555 | 65048..65752 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EXA09_RS24560 | 65907..66671 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| EXA09_RS24565 | 66789..66857 | - | 69 | Protein_76 | EAL domain-containing protein | - |
| EXA09_RS24570 | 67178..67678 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| EXA09_RS24575 | 67806..68645 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| EXA09_RS24580 | 68639..68986 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| EXA09_RS24585 | 69103..69941 | - | 839 | Protein_80 | Streptomycin 3''-adenylyltransferase | ARG |
| EXA09_RS24590 | 70087..70884 | + | 798 | Protein_81 | IS91 family transposase ISAzo26 | Transposase |
| EXA09_RS24595 | 70937..71641 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EXA09_RS24600 | 71948..72487 | - | 540 | Protein_83 | helix-turn-helix domain-containing protein | - |
| EXA09_RS24605 | 72474..73133 | - | 660 | WP_001038045.1 | tetracycline resistance transcriptional repressor TetR(C) | - |
| EXA09_RS24610 | 73226..74416 | + | 1191 | WP_001297013.1 | Tetracycline resistance protein, class C | ARG |
| EXA09_RS24615 | 74320..74658 | + | 339 | WP_002310911.1 | hypothetical protein | - |
| EXA09_RS26130 | 74663..74854 | + | 192 | WP_009873362.1 | hypothetical protein | - |
| EXA09_RS24625 | 74866..75135 | + | 270 | Protein_88 | site-specific integrase | - |
| EXA09_RS24630 | 75502..76206 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| EXA09_RS24635 | 76341..76589 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| EXA09_RS24640 | 76586..77023 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| EXA09_RS24645 | 77023..78036 | + | 1014 | Protein_92 | translesion error-prone DNA polymerase V subunit UmuC | - |
| EXA09_RS24650 | 78095..79627 | - | 1533 | WP_001297014.1 | IS3 family transposase ISKpn38 | Transposase |
| EXA09_RS24655 | 79695..79961 | + | 267 | Protein_94 | DUF4113 domain-containing protein | - |
| EXA09_RS24660 | 79963..80379 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| EXA09_RS24665 | 80372..81352 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| EXA09_RS24670 | 81766..82074 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| EXA09_RS24675 | 82161..82805 | - | 645 | WP_001144036.1 | ParA family protein | - |
| EXA09_RS24680 | 82985..83764 | - | 780 | WP_001164196.1 | site-specific integrase | - |
| EXA09_RS24685 | 83766..84179 | - | 414 | WP_000465034.1 | hypothetical protein | - |
| EXA09_RS24690 | 84702..85565 | + | 864 | WP_000654832.1 | hypothetical protein | - |
| EXA09_RS24695 | 85590..87089 | - | 1500 | WP_001297030.1 | RES family NAD+ phosphorylase | - |
| EXA09_RS24700 | 87357..87611 | + | 255 | WP_000343106.1 | hypothetical protein | - |
| EXA09_RS24705 | 87611..88201 | + | 591 | WP_001401589.1 | hypothetical protein | - |
| EXA09_RS24710 | 88414..89466 | + | 1053 | WP_000655519.1 | hypothetical protein | - |
| EXA09_RS24715 | 89642..90244 | + | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| EXA09_RS24720 | 90272..90490 | + | 219 | Protein_107 | hypothetical protein | - |
| EXA09_RS24725 | 90490..90756 | + | 267 | WP_000627832.1 | hypothetical protein | - |
| EXA09_RS24730 | 91025..91228 | - | 204 | Protein_109 | hypothetical protein | - |
| EXA09_RS24735 | 91334..91609 | - | 276 | WP_000421261.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EXA09_RS24740 | 91609..91893 | - | 285 | WP_001297026.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| EXA09_RS24745 | 92801..93832 | - | 1032 | WP_001297009.1 | plasmid replication initiator RepA | - |
| EXA09_RS24750 | 94533..95174 | + | 642 | WP_000335851.1 | transcription termination/antitermination NusG family protein | - |
| EXA09_RS24755 | 95315..95980 | + | 666 | WP_000154140.1 | hypothetical protein | - |
| EXA09_RS26135 | 96335..96481 | + | 147 | WP_235777688.1 | PilI type IV pilus biogenesis protein | - |
| EXA09_RS24765 | 96597..96932 | + | 336 | WP_001335624.1 | hypothetical protein | - |
| EXA09_RS24770 | 97159..98229 | + | 1071 | WP_001760665.1 | hypothetical protein | VF |
| EXA09_RS24775 | 98233..98670 | + | 438 | WP_000539951.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|