NZ_CP0358122394672..2559799

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 165128 bp
Accession: NZ_CP035812        Location: 2394672..2559799         Organism: Escherichia coli strain B7A       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EXA09_RS11375 (2391951) 2391951..2393378 + 1428 WP_001297612.1 two component system sensor histidine kinase QseE/GlrK -
EXA09_RS11380 (2393543) 2393543..2394256 + 714 WP_001215888.1 two-component system QseEF-associated lipoprotein QseG -
EXA09_RS11385 (2394246) 2394246..2395580 + 1335 WP_001298983.1 two-component system response regulator GlrR -
EXA09_RS11390 (2395641) 2395641..2395979 + 339 WP_000717694.1 nitrogen regulatory protein P-II -
EXA09_RS11395 (2396024) 2396024..2397214 - 1191 WP_000883124.1 NO-inducible flavohemoprotein -
EXA09_RS11400 (2397542) 2397542..2398795 + 1254 WP_000919159.1 serine hydroxymethyltransferase -
EXA09_RS11405 (2398859) 2398859..2400052 - 1194 WP_001297610.1 ROK family protein -
EXA09_RS11410 (2400170) 2400170..2403451 + 3282 WP_001297611.1 DUF5107 domain-containing protein -
EXA09_RS11415 (2403548) 2403548..2404531 + 984 WP_001124909.1 substrate-binding domain-containing protein -
EXA09_RS11420 (2404554) 2404554..2406065 + 1512 WP_000493471.1 sugar ABC transporter ATP-binding protein -
EXA09_RS11425 (2406090) 2406090..2407088 + 999 WP_001297609.1 ABC transporter permease -
EXA09_RS11430 (2407121) 2407121..2408215 + 1095 WP_000700800.1 zinc-binding dehydrogenase -
EXA09_RS11435 (2408227) 2408227..2409099 + 873 WP_000158547.1 aldose 1-epimerase -
EXA09_RS11440 (2409147) 2409147..2409569 - 423 WP_001094726.1 DoxX family protein -
EXA09_RS11445 (2409666) 2409666..2410868 - 1203 WP_000660797.1 phenylpropionate dioxygenase ferredoxin reductase subunit -
EXA09_RS11450 (2410878) 2410878..2411690 - 813 WP_001281377.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase -
EXA09_RS11455 (2411687) 2411687..2412007 - 321 WP_001080102.1 bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit -
EXA09_RS11460 (2412007) 2412007..2412525 - 519 WP_001276072.1 3-phenylpropionate/cinnamic acid dioxygenase subunit beta -
EXA09_RS11465 (2412522) 2412522..2413883 - 1362 WP_000211172.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
EXA09_RS11470 (2414019) 2414019..2414909 + 891 WP_042815467.1 DNA-binding transcriptional regulator HcaR -
EXA09_RS11475 (2415069) 2415069..2416208 + 1140 WP_000244191.1 3-phenylpropionate MFS transporter -
EXA09_RS11480 (2416200) 2416200..2417480 - 1281 WP_000983009.1 stationary phase inducible protein CsiE -
EXA09_RS11485 (2417671) 2417671..2418525 - 855 WP_001297705.1 alpha/beta hydrolase -
EXA09_RS11490 (2418670) 2418670..2419473 - 804 WP_000553451.1 inositol-1-monophosphatase -
EXA09_RS11495 (2419592) 2419592..2420329 + 738 WP_000940018.1 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ -
EXA09_RS11500 (2420630) 2420630..2421118 + 489 WP_001241356.1 Fe-S cluster assembly transcriptional regulator IscR -
EXA09_RS11505 (2421230) 2421230..2422444 + 1215 WP_001295373.1 cysteine desulfurase -
EXA09_RS11510 (2422472) 2422472..2422858 + 387 WP_000331707.1 Fe-S cluster assembly scaffold IscU -
EXA09_RS11515 (2422875) 2422875..2423198 + 324 WP_000028953.1 iron-sulfur cluster assembly protein IscA -
EXA09_RS11520 (2423294) 2423294..2423809 + 516 WP_000384411.1 co-chaperone HscB -
EXA09_RS11525 (2423826) 2423826..2425676 + 1851 WP_001196613.1 Fe-S protein assembly chaperone HscA -
EXA09_RS11530 (2425678) 2425678..2426013 + 336 WP_001124469.1 ISC system 2Fe-2S type ferredoxin -
EXA09_RS11535 (2426025) 2426025..2426225 + 201 WP_000523616.1 Fe-S cluster assembly protein IscX -
EXA09_RS11540 (2426403) 2426403..2427686 + 1284 WP_000133579.1 aminopeptidase PepB -
EXA09_RS11545 (2427828) 2427828..2428604 + 777 WP_001297328.1 enhanced serine sensitivity protein SseB -
EXA09_RS25990 (2428636) 2428636..2428761 - 126 WP_001385884.1 small toxic inner membrane protein TimP -
EXA09_RS11550 (2429097) 2429097..2429942 - 846 WP_001297330.1 3-mercaptopyruvate sulfurtransferase -
EXA09_RS11555 (2430149) 2430149..2435110 + 4962 WP_001297326.1 alpha2-macroglobulin -
EXA09_RS11560 (2435111) 2435111..2437423 + 2313 WP_001137658.1 peptidoglycan glycosyltransferase PbpC -
EXA09_RS11565 (2437572) 2437572..2438003 + 432 WP_000963837.1 nucleoside-diphosphate kinase -
EXA09_RS11570 (2438153) 2438153..2439307 + 1155 WP_000003317.1 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN -
EXA09_RS11575 (2439592) 2439592..2440605 + 1014 WP_001090850.1 cytoskeleton protein RodZ -
EXA09_RS11580 (2440632) 2440632..2441750 + 1119 WP_000551807.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
EXA09_RS11585 (2441861) 2441861..2443135 + 1275 WP_001107167.1 histidine--tRNA ligase -
EXA09_RS11590 (2443153) 2443153..2443773 + 621 WP_000409205.1 ancillary SecYEG translocon subunit YfgM -
EXA09_RS11595 (2443784) 2443784..2444962 + 1179 WP_001177043.1 outer membrane protein assembly factor BamB -
EXA09_RS11600 (2445080) 2445080..2446552 + 1473 WP_000249410.1 ribosome biogenesis GTPase Der -
EXA09_RS11605 (2446621) 2446621..2446836 + 216 WP_001297332.1 zinc ribbon domain-containing protein -
EXA09_RS11610 (2446833) 2446833..2448203 - 1371 WP_000937933.1 exodeoxyribonuclease VII large subunit -
EXA09_RS11615 (2448365) 2448365..2449831 + 1467 WP_001299507.1 IMP dehydrogenase -
EXA09_RS11620 (2449900) 2449900..2451477 + 1578 WP_000138282.1 glutamine-hydrolyzing GMP synthase -
EXA09_RS11625 (2451786) 2451786..2452994 + 1209 WP_001297323.1 Prophage integrase IntA ; Integrase Integrase
EXA09_RS11630 (2453277) 2453277..2453507 + 231 WP_021542196.1 AlpA family phage regulatory protein -
EXA09_RS11635 (2453747) 2453747..2454646 + 900 WP_023342659.1 replication initiator protein A -
EXA09_RS25995 (2455102) 2455102..2455212 + 111 WP_244462848.1 hypothetical protein -
EXA09_RS11645 (2455953) 2455953..2456261 - 309 WP_001297325.1 hypothetical protein -
EXA09_RS11650 (2456428) 2456428..2457966 - 1539 WP_024188719.1 P-type conjugative transfer protein TrbL -
EXA09_RS11655 (2457969) 2457969..2458241 - 273 WP_126738539.1 hypothetical protein -
EXA09_RS11660 (2458339) 2458339..2459130 - 792 WP_001297334.1 P-type conjugative transfer protein TrbJ -
EXA09_RS11665 (2459401) 2459401..2459625 - 225 WP_001716819.1 hypothetical protein -
EXA09_RS11670 (2459628) 2459628..2459837 - 210 WP_042815477.1 TraC family protein -
EXA09_RS11675 (2460573) 2460573..2461649 + 1077 WP_001297336.1 SIR2 family protein -
EXA09_RS11680 (2461657) 2461657..2463447 + 1791 WP_001297331.1 ATP-binding protein -
EXA09_RS11685 (2463509) 2463509..2463706 + 198 WP_001297329.1 hypothetical protein -
EXA09_RS11690 (2463900) 2463900..2464439 - 540 WP_000755173.1 DUF5384 family protein -
EXA09_RS11695 (2464455) 2464455..2464973 - 519 WP_001295476.1 glycine zipper 2TM domain-containing protein -
EXA09_RS11700 (2465202) 2465202..2465899 + 698 WP_103215986.1 IS1 family transposase IS1R Transposase
EXA09_RS11705 (2466061) 2466061..2466252 - 192 WP_000076001.1 YfgG family protein -
EXA09_RS11710 (2466270) 2466270..2466422 + 153 WP_000017552.1 hypothetical protein -
EXA09_RS11715 (2466604) 2466604..2468847 + 2244 WP_000772775.1 Cyclic di-GMP phosphodiesterase PdeF VF
EXA09_RS11720 (2468886) 2468886..2470427 - 1542 WP_001121363.1 exopolyphosphatase -
EXA09_RS11725 (2470432) 2470432..2472498 - 2067 WP_000529576.1 polyphosphate kinase 1 -
EXA09_RS11730 (2472669) 2472669..2473307 - 639 WP_001028614.1 phosphoribosylglycinamide formyltransferase -
EXA09_RS11735 (2473307) 2473307..2474344 - 1038 WP_001295474.1 Phosphoribosylformylglycinamidine cyclo-ligase VF
EXA09_RS11740 (2474669) 2474669..2475295 + 627 WP_001295473.1 uracil phosphoribosyltransferase -
EXA09_RS11745 (2475381) 2475381..2476670 + 1290 WP_000198328.1 uracil permease -
EXA09_RS11750 (2476765) 2476765..2477466 + 702 WP_001307333.1 DnaA inactivator Hda -
EXA09_RS11755 (2477604) 2477604..2477963 - 360 WP_000166449.1 arsenate reductase (glutaredoxin) -
EXA09_RS11760 (2477984) 2477984..2479447 - 1464 WP_000489667.1 beta-barrel assembly-enhancing protease -
EXA09_RS11765 (2479660) 2479660..2480721 + 1062 WP_000892044.1 AI-2E family transporter -
EXA09_RS11775 (2480759) 2480759..2481606 - 848 Protein_2287 formate transporter FocB -
EXA09_RS11780 (2481628) 2481628..2483640 - 2013 WP_001251558.1 DNA-binding transcriptional activator HyfR VF
EXA09_RS11785 (2483670) 2483670..2484083 - 414 WP_000796789.1 hydrogenase 4 assembly chaperone HyfJ -
EXA09_RS11790 (2484076) 2484076..2484834 - 759 WP_001297696.1 hydrogenase 4 catalytic subunit HyfI -
EXA09_RS11795 (2484831) 2484831..2485370 - 540 WP_000916082.1 hydrogenase 4 subunit H -
EXA09_RS11800 (2485380) 2485380..2487095 - 1716 WP_001297839.1 hydrogenase 4 catalytic subunit HyfG -
EXA09_RS11805 (2487085) 2487085..2488664 - 1580 Protein_2293 hydrogenase 4 subunit F -
EXA09_RS11810 (2488669) 2488669..2489319 - 651 WP_000147987.1 hydrogenase 4 membrane subunit -
EXA09_RS11815 (2489331) 2489331..2490560 - 1230 Protein_2295 hydrogenase 4 subunit D -
EXA09_RS11825 (2490577) 2490577..2491521 - 945 WP_001297317.1 hydrogenase 4 subunit HyfC -
EXA09_RS11830 (2491532) 2491532..2493300 - 1769 Protein_2297 hydrogenase 4 subunit B -
EXA09_RS11835 (2493549) 2493549..2494166 - 618 WP_001295470.1 hydrogenase 4 subunit HyfA -
EXA09_RS11840 (2494419) 2494419..2494889 - 471 WP_001068682.1 thioredoxin-dependent thiol peroxidase -
EXA09_RS11845 (2494889) 2494889..2495461 - 573 WP_000176187.1 glycine cleavage system transcriptional repressor -
EXA09_RS11850 (2495607) 2495607..2496485 + 879 WP_001295469.1 4-hydroxy-tetrahydrodipicolinate synthase -
EXA09_RS11855 (2496502) 2496502..2497536 + 1035 WP_001297320.1 outer membrane protein assembly factor BamC -
EXA09_RS11860 (2497749) 2497749..2498462 + 714 WP_001295467.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
EXA09_RS11865 (2498617) 2498617..2498844 + 228 WP_000450524.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
EXA09_RS11870 (2498844) 2498844..2499242 + 399 WP_000911329.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
EXA09_RS11875 (2499389) 2499389..2500252 + 864 WP_001267507.1 neutral zinc metallopeptidase -
EXA09_RS11880 (2500267) 2500267..2502282 + 2016 WP_000829332.1 tRNA cytosine(34) acetyltransferase TmcA -
EXA09_RS11885 (2502356) 2502356..2503054 + 699 WP_000679812.1 esterase -
EXA09_RS11890 (2503164) 2503164..2503364 - 201 WP_000383836.1 YpfN family protein -
EXA09_RS11895 (2503392) 2503392..2504519 - 1128 WP_001277809.1 succinyl-diaminopimelate desuccinylase -
EXA09_RS11900 (2504523) 2504523..2504879 - 357 WP_000258247.1 ArsC family reductase -
EXA09_RS11905 (2505260) 2505260..2505319 + 60 WP_001386977.1 protein YpfM -
EXA09_RS11910 (2505418) 2505418..2508531 - 3114 WP_001273141.1 Multidrug resistance protein MdtB VF
EXA09_RS11915 (2508695) 2508695..2510395 - 1701 WP_000636129.1 nitrate/nitrite two-component system sensor histidine kinase NarQ -
EXA09_RS11920 (2510601) 2510601..2512580 + 1980 WP_001078870.1 formate-dependent uric acid utilization protein AegA -
EXA09_RS11925 (2512648) 2512648..2513223 + 576 WP_000193711.1 GDP-mannose pyrophosphatase NudK -
EXA09_RS11930 (2513349) 2513349..2514392 + 1044 WP_001270524.1 DUF1176 domain-containing protein -
EXA09_RS11935 (2514488) 2514488..2516491 - 2004 WP_001297319.1 transketolase -
EXA09_RS11940 (2516511) 2516511..2517461 - 951 WP_001003709.1 transaldolase -
EXA09_RS11945 (2517750) 2517750..2520029 + 2280 WP_000342642.1 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase -
EXA09_RS11950 (2520322) 2520322..2520657 + 336 WP_000356956.1 ethanolamine utilization microcompartment protein EutS -
EXA09_RS11955 (2520670) 2520670..2521149 + 480 WP_000820764.1 ethanolamine utilization acetate kinase EutP -
EXA09_RS11960 (2521124) 2521124..2521825 + 702 WP_000733906.1 ethanolamine utilization acetate kinase EutQ -
EXA09_RS11965 (2521822) 2521822..2522625 + 804 WP_000651298.1 ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT -
EXA09_RS11970 (2522622) 2522622..2523638 + 1017 WP_001297321.1 phosphate acetyltransferase -
EXA09_RS11975 (2523677) 2523677..2523970 + 294 WP_000387713.1 ethanolamine utilization microcompartment protein EutM -
EXA09_RS11980 (2524077) 2524077..2524364 + 288 WP_000762196.1 ethanolamine utilization microcompartment protein EutN -
EXA09_RS11985 (2524376) 2524376..2525785 + 1410 WP_001075691.1 Gamma-glutamyl phosphate reductase VF
EXA09_RS11990 (2525796) 2525796..2526632 + 837 WP_000929709.1 ethanolamine utilization protein EutJ -
EXA09_RS11995 (2526622) 2526622..2527809 + 1188 WP_001297322.1 hypothetical protein VF
EXA09_RS12000 (2527926) 2527926..2529152 + 1227 WP_000512374.1 ethanolamine utilization protein EutH -
EXA09_RS12005 (2529149) 2529149..2530552 + 1404 WP_001297316.1 ethanolamine ammonia-lyase reactivating factor EutA -
EXA09_RS12010 (2530564) 2530564..2531925 + 1362 WP_000769961.1 ethanolamine ammonia-lyase subunit alpha -
EXA09_RS12015 (2531946) 2531946..2532833 + 888 WP_000372364.1 ethanolamine ammonia-lyase subunit beta -
EXA09_RS12020 (2532843) 2532843..2533502 + 660 WP_001111038.1 ethanolamine utilization microcompartment protein EutL -
EXA09_RS12025 (2533515) 2533515..2534015 + 501 WP_000606257.1 ethanolamine utilization microcompartment protein EutK -
EXA09_RS12030 (2534061) 2534061..2535113 + 1053 WP_000753700.1 HTH-type transcriptional regulator EutR -
EXA09_RS12035 (2535119) 2535119..2536018 - 900 WP_000801367.1 oxygen-dependent coproporphyrinogen oxidase -
EXA09_RS12040 (2536022) 2536022..2536891 - 870 WP_042815484.1 N-acetylmuramoyl-L-alanine amidase AmiA -
EXA09_RS12045 (2537105) 2537105..2537530 + 426 WP_000406000.1 GNAT family acetyltransferase -
EXA09_RS12050 (2537517) 2537517..2537966 + 450 WP_001307326.1 DUF2919 domain-containing protein -
EXA09_RS12055 (2538027) 2538027..2538602 + 576 WP_000838945.1 RpoE-regulated lipoprotein -
EXA09_RS12060 (2538698) 2538698..2539597 + 900 WP_000084590.1 porphyrinogen peroxidase -
EXA09_RS12065 (2539655) 2539655..2540959 - 1305 WP_001315775.1 D-aminopeptidase VF
EXA09_RS12070 (2540964) 2540964..2542388 - 1425 WP_001040486.1 PTS N-acetylmuramic acid transporter subunit IIBC -
EXA09_RS12075 (2542392) 2542392..2543288 - 897 WP_001175648.1 N-acetylmuramic acid 6-phosphate etherase -
EXA09_RS12080 (2543452) 2543452..2544309 + 858 WP_001297646.1 HTH-type transcriptional regulator MurR -
EXA09_RS12085 (2544438) 2544438..2545229 + 792 WP_000517431.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
EXA09_RS12090 (2545400) 2545400..2546416 + 1017 WP_000290224.1 thiosulfate/sulfate ABC transporter substrate-binding protein CysP -
EXA09_RS12095 (2546416) 2546416..2547249 + 834 WP_000458406.1 sulfate/thiosulfate ABC transporter permease CysT -
EXA09_RS12100 (2547249) 2547249..2548124 + 876 WP_000852686.1 sulfate/thiosulfate ABC transporter permease CysW -
EXA09_RS12105 (2548114) 2548114..2549211 + 1098 WP_000021040.1 Vitamin B12 import ATP-binding protein BtuD VF
EXA09_RS12110 (2549345) 2549345..2550256 + 912 WP_001297645.1 cysteine synthase B -
EXA09_RS12115 (2550259) 2550259..2550627 - 369 WP_000719943.1 YfeK family protein -
EXA09_RS12120 (2550732) 2550732..2551583 + 852 WP_024171811.1 pyridoxine/pyridoxal/pyridoxamine kinase -
EXA09_RS12125 (2551625) 2551625..2552134 - 510 WP_000522247.1 PTS glucose transporter subunit IIA -
EXA09_RS12130 (2552175) 2552175..2553902 - 1728 WP_000623136.1 phosphoenolpyruvate-protein phosphotransferase PtsI -
EXA09_RS12135 (2553947) 2553947..2554204 - 258 WP_000487600.1 phosphocarrier protein Hpr -
EXA09_RS12140 (2554588) 2554588..2555559 - 972 WP_000034402.1 cysteine synthase A -
EXA09_RS12145 (2555744) 2555744..2556505 - 762 WP_000254843.1 sulfate transporter CysZ -
EXA09_RS12150 (2556735) 2556735..2557721 + 987 WP_001297862.1 cell division protein ZipA -
EXA09_RS12155 (2557792) 2557792..2559807 + 2016 WP_000443665.1 NAD-dependent DNA ligase LigA -
EXA09_RS12160 (2559809) 2559809..2560027 + 219 WP_000410201.1 DUF3820 family protein -
EXA09_RS12165 (2560024) 2560024..2561022 - 999 WP_000765604.1 bile acid:sodium symporter family protein -
EXA09_RS12170 (2561112) 2561112..2562038 + 927 WP_001297855.1 LysR family transcriptional regulator -
EXA09_RS12175 (2562029) 2562029..2562370 - 342 WP_000201411.1 FlxA-like family protein -
EXA09_RS12200 (2563302) 2563302..2564717 + 1416 WP_000695655.1 glutamate--tRNA ligase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance