MGE detailed information
MGE type: Conjugative plasmid MGE length: 69541 bp
Accession: NZ_CP035722 Location: 1..69541 Organism: Escherichia coli strain U15A Replicon: plasmid pU15A_B
Accession: NZ_CP035722 Location: 1..69541 Organism: Escherichia coli strain U15A Replicon: plasmid pU15A_B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U15A_RS25260 () | 597..827 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| U15A_RS25270 () | 1862..2053 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| U15A_RS25275 () | 2050..2472 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| U15A_RS25280 () | 2519..2821 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| U15A_RS25290 () | 3361..4137 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| U15A_RS25295 () | 4188..4622 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| U15A_RS25300 () | 4636..4857 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| U15A_RS25305 () | 4858..5541 | - | 684 | WP_000085885.1 | DNA methylase | - |
| U15A_RS25310 () | 5618..5929 | - | 312 | WP_032144809.1 | hypothetical protein | - |
| U15A_RS25315 () | 5926..6828 | - | 903 | WP_001386431.1 | DUF1281 domain-containing protein | - |
| U15A_RS25320 () | 7363..8325 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| U15A_RS25325 () | 8328..8678 | + | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| U15A_RS25335 () | 9081..9533 | - | 453 | WP_000670962.1 | N-acetyltransferase | - |
| U15A_RS25340 () | 10063..10272 | + | 210 | WP_001535752.1 | microcin B17 | - |
| U15A_RS25345 () | 10299..11186 | + | 888 | WP_000243884.1 | McbB family protein | - |
| U15A_RS25350 () | 11188..12006 | + | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| U15A_RS25355 () | 11987..13177 | + | 1191 | WP_000611492.1 | YcaO-like family protein | - |
| U15A_RS25360 () | 13187..13912 | + | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| U15A_RS25365 () | 13909..14640 | + | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| U15A_RS25370 () | 14644..15207 | + | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| U15A_RS25375 () | 15777..16442 | + | 666 | WP_001535733.1 | hypothetical protein | - |
| U15A_RS25380 () | 16478..16777 | - | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| U15A_RS25385 () | 16767..17030 | - | 264 | WP_001089473.1 | hypothetical protein | - |
| U15A_RS25405 () | 18100..18957 | - | 858 | WP_001673237.1 | incFII family plasmid replication initiator RepA | - |
| U15A_RS25410 () | 18950..19024 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| U15A_RS25420 () | 19259..19516 | - | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| U15A_RS25425 () | 19756..20346 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| U15A_RS25430 () | 20384..20593 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| U15A_RS25435 () | 20639..21100 | - | 462 | WP_001233842.1 | thermonuclease family protein | - |
| U15A_RS25440 () | 21345..21557 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| U15A_RS25445 () | 21686..22246 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| U15A_RS25450 () | 22349..23209 | - | 861 | WP_000704518.1 | putative protein YcjY | VF |
| U15A_RS25455 () | 23268..24014 | - | 747 | WP_000205731.1 | conjugal transfer pilus acetylase TraX | - |
| U15A_RS25460 () | 24034..29304 | - | 5271 | WP_049091984.1 | Multifunctional conjugation protein TraI | Relaxase |
| U15A_RS25465 () | 29304..31529 | - | 2226 | WP_016238713.1 | type IV conjugative transfer system coupling protein TraD | - |
| U15A_RS25470 () | 31580..32317 | - | 738 | WP_001673178.1 | hypothetical protein | - |
| U15A_RS25475 () | 32520..33251 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| U15A_RS25480 () | 33265..33774 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| U15A_RS25485 () | 33771..36596 | - | 2826 | WP_129481432.1 | conjugal transfer mating pair stabilization protein TraG | - |
| U15A_RS25490 () | 36593..37966 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| U15A_RS25495 () | 37953..38378 | - | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| U15A_RS25500 () | 38326..38673 | - | 348 | WP_051788537.1 | P-type conjugative transfer protein TrbJ | - |
| U15A_RS25505 () | 38603..39148 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| U15A_RS25510 () | 39135..39419 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| U15A_RS25515 () | 39500..39835 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| U15A_RS25520 () | 39816..40157 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| U15A_RS25525 () | 40171..40914 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| U15A_RS25530 () | 40907..41164 | - | 258 | WP_000864309.1 | conjugal transfer protein TrbE | - |
| U15A_RS25535 () | 41191..43041 | - | 1851 | WP_001570866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| U15A_RS25540 () | 43038..43460 | - | 423 | WP_001229306.1 | HNH endonuclease | - |
| U15A_RS25545 () | 43485..43856 | - | 372 | WP_000056340.1 | hypothetical protein | - |
| U15A_RS25550 () | 43853..44491 | - | 639 | WP_001035183.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| U15A_RS25560 () | 44920..45099 | - | 180 | WP_001750891.1 | hypothetical protein | - |
| U15A_RS26210 () | 45191..45280 | - | 90 | Protein_54 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| U15A_RS25565 () | 45307..45825 | - | 519 | WP_000009087.1 | hypothetical protein | - |
| U15A_RS25570 () | 45901..46197 | - | 297 | WP_042033120.1 | hypothetical protein | - |
| U15A_RS25575 () | 46224..47216 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| U15A_RS25580 () | 47213..47845 | - | 633 | WP_001526032.1 | type-F conjugative transfer system protein TraW | - |
| U15A_RS25585 () | 47842..48228 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| U15A_RS25590 () | 48225..50855 | - | 2631 | WP_049092012.1 | type IV secretion system protein TraC | - |
| U15A_RS25595 () | 50981..51328 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| U15A_RS25600 () | 51356..51574 | - | 219 | WP_000556751.1 | hypothetical protein | - |
| U15A_RS25605 () | 51655..52128 | - | 474 | WP_016249716.1 | hypothetical protein | - |
| U15A_RS25610 () | 52121..52534 | - | 414 | WP_000549589.1 | hypothetical protein | - |
| U15A_RS25615 () | 52527..52748 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| U15A_RS25620 () | 52883..53398 | - | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| U15A_RS25625 () | 53398..53757 | - | 360 | WP_001617876.1 | conjugal transfer protein TrbD | - |
| U15A_RS25630 () | 53696..54283 | - | 588 | WP_013023871.1 | conjugal transfer protein TraP | - |
| U15A_RS25635 () | 54252..55703 | - | 1452 | WP_130091478.1 | conjugal transfer protein TraB | - |
| U15A_RS25640 () | 55703..56431 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| U15A_RS25645 () | 56418..56984 | - | 567 | WP_016239103.1 | type IV conjugative transfer system protein TraE | - |
| U15A_RS25650 () | 57006..57317 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| U15A_RS25655 () | 57332..57691 | - | 360 | WP_016239104.1 | type IV conjugative transfer system pilin TraA | - |
| U15A_RS25660 () | 57724..57951 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| U15A_RS25665 () | 58088..58759 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| U15A_RS25670 () | 58953..59336 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| U15A_RS25680 () | 59659..60261 | + | 603 | WP_023908348.1 | hypothetical protein | VF |
| U15A_RS25690 () | 60556..61377 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| U15A_RS25695 () | 61496..61783 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| U15A_RS25710 () | 62710..62868 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 62912..63136 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62912..63136 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62912..63136 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62912..63136 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| U15A_RS26055 () | 62948..63136 | + | 189 | WP_001336239.1 | hypothetical protein | - |
| U15A_RS25715 () | 63148..63867 | - | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| U15A_RS25720 () | 63864..64298 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| U15A_RS25725 () | 64353..66311 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| U15A_RS25730 () | 66377..66610 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| U15A_RS25735 () | 66673..67212 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| U15A_RS25760 () | 67855..68091 | - | 237 | WP_032153960.1 | hypothetical protein | - |
| U15A_RS25765 () | 68117..68680 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|