MGE detailed information
MGE type: Conjugative plasmid MGE length: 109023 bp
Accession: NZ_CP035721 Location: 1..109023 Organism: Escherichia coli strain U15A Replicon: plasmid pU15A_A
Accession: NZ_CP035721 Location: 1..109023 Organism: Escherichia coli strain U15A Replicon: plasmid pU15A_A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U15A_RS24470 () | 338..796 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| U15A_RS24475 () | 793..1611 | + | 819 | WP_000646098.1 | hypothetical protein | VF |
| U15A_RS24480 () | 1608..2756 | + | 1149 | WP_125075212.1 | putative protein YggR | VF |
| U15A_RS24485 () | 2753..3043 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| U15A_RS24490 () | 3058..3609 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
| U15A_RS24495 () | 3699..7466 | + | 3768 | WP_129765215.1 | DNA primase | - |
| U15A_RS24500 () | 7484..7831 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| U15A_RS24505 () | 7828..8520 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| U15A_RS24510 () | 8531..9514 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
| U15A_RS24515 () | 9517..10806 | + | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| U15A_RS24520 () | 10806..11510 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| U15A_RS24525 () | 11510..12037 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| U15A_RS24530 () | 12088..12492 | + | 405 | WP_129765216.1 | IncI1-type conjugal transfer protein TraR | - |
| U15A_RS24535 () | 12556..12744 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| U15A_RS24540 () | 12728..13030 | + | 303 | Protein_14 | conjugal transfer protein TraT | - |
| U15A_RS24545 () | 13060..14673 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| U15A_RS24550 () | 14704..15054 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| U15A_RS24555 () | 15051..15476 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| U15A_RS24560 () | 15562..16068 | + | 507 | Protein_18 | IncI1-type conjugal transfer protein TraT | - |
| U15A_RS24565 () | 16158..19202 | + | 3045 | WP_001024786.1 | IncI1-type conjugal transfer protein TraU | - |
| U15A_RS24570 () | 19202..19816 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| U15A_RS24575 () | 19783..20985 | + | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| U15A_RS24580 () | 21014..21598 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| U15A_RS24585 () | 21695..23863 | + | 2169 | WP_125075213.1 | DotA/TraY family protein | - |
| U15A_RS24590 () | 23937..24587 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| U15A_RS24595 () | 24659..24868 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| U15A_RS26035 () | 25260..25436 | + | 177 | WP_001054897.1 | hypothetical protein | - |
| U15A_RS24600 () | 26095..26346 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| U15A_RS24605 () | 26418..26570 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - () | 26625..26682 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26625..26682 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26625..26682 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 26625..26682 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| U15A_RS24610 () | 26862..28070 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| U15A_RS24615 () | 28089..29159 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| U15A_RS24620 () | 29152..31443 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| U15A_RS24625 () | 31480..34179 | - | 2700 | WP_001360283.1 | Protein TraI | Relaxase |
| U15A_RS24630 () | 34190..34522 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| U15A_RS24635 () | 34756..35091 | + | 336 | WP_000157096.1 | hypothetical protein | - |
| U15A_RS24640 () | 35175..36023 | - | 849 | WP_129765217.1 | DUF4942 domain-containing protein | - |
| U15A_RS26190 () | 36372..36569 | + | 198 | WP_001161115.1 | hypothetical protein | - |
| U15A_RS24655 () | 36603..36854 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| U15A_RS24660 () | 36885..37082 | - | 198 | WP_001348086.1 | hypothetical protein | - |
| U15A_RS24665 () | 37105..38031 | - | 927 | WP_015059305.1 | Recombination-promoting nuclease RpnA | VF |
| U15A_RS24670 () | 38096..38362 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| U15A_RS24675 () | 38455..38889 | - | 435 | WP_000218862.1 | hypothetical protein | - |
| U15A_RS24690 () | 39622..40122 | - | 501 | WP_129765218.1 | antirestriction protein ArdA | - |
| U15A_RS24700 () | 40584..41180 | - | 597 | WP_000977995.1 | hypothetical protein | - |
| U15A_RS24705 () | 41177..41896 | - | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| U15A_RS24710 () | 41893..42327 | - | 435 | WP_000845903.1 | conjugation system SOS inhibitor PsiB | - |
| U15A_RS24715 () | 42382..44340 | - | 1959 | WP_129765219.1 | ParB/RepB/Spo0J family partition protein | - |
| U15A_RS24720 () | 44399..44632 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| U15A_RS24725 () | 44690..45217 | - | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| U15A_RS24735 () | 45570..45851 | - | 282 | WP_154671919.1 | hypothetical protein | - |
| U15A_RS24745 () | 45989..46180 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| U15A_RS24750 () | 46177..46599 | - | 423 | WP_129765220.1 | DUF1380 family protein | - |
| U15A_RS24755 () | 46646..46948 | - | 303 | WP_001589340.1 | antirestriction protein | - |
| U15A_RS26195 () | 47486..48265 | - | 780 | WP_207213211.1 | hypothetical protein | - |
| U15A_RS24770 () | 48311..48844 | - | 534 | WP_130091475.1 | DUF1380 family protein | - |
| U15A_RS24775 () | 48954..49637 | - | 684 | WP_000086147.1 | DNA methylase | - |
| U15A_RS24780 () | 49713..50018 | - | 306 | WP_032170510.1 | hypothetical protein | - |
| U15A_RS24785 () | 50022..50924 | - | 903 | WP_207213212.1 | DUF1281 domain-containing protein | - |
| U15A_RS24800 () | 51605..51997 | - | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| U15A_RS24805 () | 52001..52975 | - | 975 | WP_001217836.1 | hypothetical protein | - |
| U15A_RS26040 () | 53215..53589 | - | 375 | WP_000752652.1 | hypothetical protein | - |
| U15A_RS24815 () | 53589..54221 | - | 633 | WP_000312331.1 | ParA family protein | - |
| U15A_RS24820 () | 54823..55608 | - | 786 | WP_001596998.1 | site-specific integrase | - |
| U15A_RS24825 () | 55610..56023 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| U15A_RS24830 () | 56592..56849 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| U15A_RS24835 () | 56849..57439 | + | 591 | WP_000194576.1 | hypothetical protein | - |
| U15A_RS24840 () | 57459..57806 | - | 348 | WP_000142451.1 | hypothetical protein | - |
| U15A_RS24845 () | 57935..58270 | + | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| U15A_RS24850 () | 58292..60172 | - | 1881 | WP_116979016.1 | colicin | - |
| U15A_RS24860 () | 60451..61797 | - | 1347 | WP_001132033.1 | hypothetical protein | - |
| U15A_RS24870 () | 62151..62753 | + | 603 | WP_000517692.1 | hypothetical protein | - |
| U15A_RS24875 () | 62809..63318 | + | 510 | WP_000045394.1 | hypothetical protein | - |
| U15A_RS24895 () | 64387..65418 | - | 1032 | WP_000907863.1 | replication initiation protein | - |
| U15A_RS24910 () | 66391..66654 | + | 264 | WP_001324596.1 | ash family protein | - |
| U15A_RS24915 () | 66572..66859 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| U15A_RS24925 () | 67301..67834 | + | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| U15A_RS24935 () | 68088..68771 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| U15A_RS24940 () | 68785..69351 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| U15A_RS24950 () | 69619..69873 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| U15A_RS24955 () | 69916..70368 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| U15A_RS24965 () | 71042..72109 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| U15A_RS24970 () | 72109..72546 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| U15A_RS24975 () | 72560..74242 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| U15A_RS24980 () | 74235..75530 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| U15A_RS24985 () | 75517..75969 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| U15A_RS24990 () | 75980..77533 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| U15A_RS24995 () | 77546..78643 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| U15A_RS25000 () | 78661..79275 | + | 615 | WP_129765223.1 | hypothetical protein | VF |
| U15A_RS25005 () | 79285..79845 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| U15A_RS25010 () | 79830..80486 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| U15A_RS25015 () | 80486..81910 | + | 1425 | WP_001389385.1 | hypothetical protein | VF |
| U15A_RS26200 () | 81907..82104 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| U15A_RS25030 () | 82655..83359 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| U15A_RS25040 () | 83412..83918 | + | 507 | Protein_93 | transposase | - |
| U15A_RS25045 () | 83927..84787 | + | 861 | WP_000493383.1 | EamA family transporter | - |
| U15A_RS25050 () | 84819..86018 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| U15A_RS25055 () | 86124..86750 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| U15A_RS25060 () | 86782..87018 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| U15A_RS25065 () | 87072..87908 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| U15A_RS25070 () | 87908..88711 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| U15A_RS25075 () | 88772..89587 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| U15A_RS25085 () | 89895..90071 | - | 177 | Protein_101 | replication protein C | - |
| U15A_RS25090 () | 90132..90836 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| U15A_RS25100 () | 90958..91863 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| U15A_RS25105 () | 91860..93098 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| U15A_RS25110 () | 93098..93682 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| U15A_RS25125 () | 94175..94939 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| U15A_RS26050 () | 95057..95122 | - | 66 | Protein_107 | EAL domain-containing protein | - |
| U15A_RS25135 () | 95166..95471 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| U15A_RS25140 () | 95482..96687 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| U15A_RS25145 () | 96843..97046 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| U15A_RS25155 () | 97174..98013 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| U15A_RS25160 () | 98007..98354 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| U15A_RS25165 () | 98560..99348 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| U15A_RS25170 () | 99479..99952 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| U15A_RS25175 () | 100110..100859 | + | 750 | Protein_115 | IS91 family transposase ISAzo26 | Transposase |
| U15A_RS25180 () | 100918..101622 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| U15A_RS26205 () | 101674..101778 | - | 105 | Protein_117 | tunicamycin resistance protein | - |
| U15A_RS25190 () | 101791..102651 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| U15A_RS25200 () | 102794..103129 | + | 336 | Protein_119 | IS4 family transposase IS10R | Transposase |
| U15A_RS25205 () | 103189..103893 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| U15A_RS25220 () | 104115..104333 | + | 219 | WP_071527775.1 | shufflon protein D' | - |
| U15A_RS25230 () | 104623..104778 | - | 156 | WP_001302705.1 | hypothetical protein | - |
| U15A_RS25235 () | 104906..106060 | + | 1155 | WP_001139957.1 | integrase | - |
| U15A_RS25240 () | 106211..107035 | + | 825 | WP_001238939.1 | hypothetical protein | - |
| U15A_RS25245 () | 107120..108322 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| U15A_RS25250 () | 108382..108966 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|