MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_CP035545 Location: 5411767..5430487 Organism: Escherichia coli strain FSIS11705876 Replicon: chromosome
Accession: NZ_CP035545 Location: 5411767..5430487 Organism: Escherichia coli strain FSIS11705876 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EB814_RS26840 () | 5406918..5408096 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| EB814_RS26845 () | 5408164..5409006 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| EB814_RS26850 () | 5409272..5411455 | - | 2184 | WP_000535062.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| EB814_RS26855 () | 5411767..5412033 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| EB814_RS26860 () | 5412030..5412797 | - | 768 | WP_000222488.1 | hypothetical protein | - |
| EB814_RS26865 () | 5412807..5413958 | - | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| EB814_RS26870 () | 5414074..5415345 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| EB814_RS26875 () | 5415386..5416618 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| EB814_RS26880 () | 5417085..5417837 | + | 753 | Protein_5232 | Recombination-promoting nuclease RpnD | VF |
| EB814_RS27910 () | 5417842..5418042 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| EB814_RS26885 () | 5418285..5419697 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| EB814_RS26890 () | 5419874..5420038 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| EB814_RS26895 () | 5420135..5421016 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| EB814_RS26900 () | 5421064..5422227 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| EB814_RS26905 () | 5422274..5422615 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 5422610..5422686 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5422610..5422686 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5422610..5422686 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5422610..5422686 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 5422610..5422686 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5422610..5422686 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5422610..5422686 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 5422610..5422686 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| EB814_RS26910 () | 5422836..5424590 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| EB814_RS26915 () | 5424590..5426059 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| EB814_RS26920 () | 5426126..5428558 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| EB814_RS26925 () | 5428836..5429120 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| EB814_RS26930 () | 5429129..5430487 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| EB814_RS26935 () | 5430556..5431512 | - | 957 | WP_001297640.1 | GTPase | - |
| EB814_RS26940 () | 5431523..5431726 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| EB814_RS26945 () | 5431776..5433926 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| EB814_RS26950 () | 5434219..5434761 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |