MGE detailed information
MGE type: Genomic_island MGE length: 30720 bp
Accession: NZ_CP035498 Location: 4807592..4838311 Organism: Escherichia coli strain 04-00955 Replicon: chromosome
Accession: NZ_CP035498 Location: 4807592..4838311 Organism: Escherichia coli strain 04-00955 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQO00_RS23880 () | 4805131..4806897 | - | 1767 | WP_001546393.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| EQO00_RS23885 () | 4807261..4807494 | - | 234 | WP_000124167.1 | hypothetical protein | - |
| EQO00_RS23890 () | 4807592..4808215 | - | 624 | WP_001260397.1 | hypothetical protein | - |
| EQO00_RS23895 () | 4808483..4809031 | - | 549 | WP_001534800.1 | hypothetical protein | - |
| EQO00_RS23905 () | 4809298..4809531 | - | 234 | WP_000958494.1 | AlpA family transcriptional regulator | - |
| EQO00_RS23910 () | 4809600..4810160 | - | 561 | WP_000991588.1 | hypothetical protein | - |
| EQO00_RS23915 () | 4810408..4810974 | - | 567 | WP_001126824.1 | inovirus-type Gp2 protein | - |
| EQO00_RS23920 () | 4812516..4814120 | - | 1605 | WP_001083418.1 | DUF3987 domain-containing protein | - |
| EQO00_RS23925 () | 4814420..4815202 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| EQO00_RS23930 () | 4815199..4816221 | - | 1023 | WP_001546392.1 | IS21 family transposase IS100kyp | Transposase |
| EQO00_RS23935 () | 4816406..4817137 | - | 732 | WP_001075496.1 | inovirus Gp2 family protein | - |
| EQO00_RS23945 () | 4817807..4818337 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| EQO00_RS23950 () | 4819501..4820724 | - | 1224 | WP_001546391.1 | hypothetical protein | - |
| EQO00_RS23960 () | 4820825..4821709 | + | 885 | WP_001116801.1 | 50S ribosome-binding GTPase | - |
| EQO00_RS23965 () | 4821912..4822592 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| EQO00_RS23970 () | 4822740..4823417 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| EQO00_RS23975 () | 4823423..4823656 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| EQO00_RS23980 () | 4823746..4824564 | + | 819 | WP_001175160.1 | DUF945 domain-containing protein | - |
| EQO00_RS23985 () | 4824655..4825140 | + | 486 | WP_000213697.1 | antirestriction protein | - |
| EQO00_RS23990 () | 4825155..4825631 | + | 477 | WP_001298074.1 | RadC family protein | - |
| EQO00_RS23995 () | 4825718..4825939 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| EQO00_RS24000 () | 4826019..4826387 | + | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EQO00_RS24005 () | 4826477..4826851 | + | 375 | WP_001468432.1 | TA system toxin CbtA family protein | Toxin Detail |
| EQO00_RS24010 () | 4826848..4827336 | + | 489 | WP_000777545.1 | hypothetical protein | - |
| EQO00_RS24015 () | 4827348..4827545 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| EQO00_RS24020 () | 4827642..4828211 | + | 570 | WP_001290252.1 | DUF4942 domain-containing protein | - |
| EQO00_RS24030 () | 4828960..4830498 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| EQO00_RS24040 () | 4830864..4832198 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| EQO00_RS24045 () | 4832278..4834425 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| EQO00_RS24050 () | 4834484..4835941 | + | 1458 | WP_000856825.1 | dipeptide/tripeptide permease DtpC | - |
| EQO00_RS24055 () | 4836178..4837695 | + | 1518 | WP_000003805.1 | lysine--tRNA ligase | - |
| EQO00_RS24060 () | 4837814..4837987 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| EQO00_RS24065 () | 4838015..4838311 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| EQO00_RS24070 () | 4838540..4838812 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| EQO00_RS24075 () | 4838824..4839054 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| EQO00_RS24080 () | 4839235..4840866 | + | 1632 | WP_001216466.1 | sensor histidine kinase | - |
| EQO00_RS24085 () | 4840863..4841582 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|