MGE detailed information
MGE type: Prophage MGE length: 46678 bp
Accession: NZ_CP035498 Location: 3233431..3280108 Organism: Escherichia coli strain 04-00955 Replicon: chromosome
Accession: NZ_CP035498 Location: 3233431..3280108 Organism: Escherichia coli strain 04-00955 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQO00_RS15850 () | 3228650..3229357 | - | 708 | WP_001186413.1 | Ni/Fe-hydrogenase b-type cytochrome subunit | - |
| EQO00_RS15855 () | 3229376..3231169 | - | 1794 | WP_000107399.1 | Ni/Fe-hydrogenase large subunit | - |
| EQO00_RS15860 () | 3231166..3232284 | - | 1119 | WP_001058323.1 | hydrogenase 1 small subunit | - |
| EQO00_RS15870 () | 3232938..3233267 | + | 330 | WP_001367470.1 | YkgJ family cysteine cluster protein | - |
| EQO00_RS15875 () | 3233431..3234102 | - | 672 | WP_170919194.1 | DUF4376 domain-containing protein | - |
| EQO00_RS15880 () | 3234102..3234326 | - | 225 | WP_001367204.1 | hypothetical protein | - |
| EQO00_RS15885 () | 3234336..3235736 | - | 1401 | WP_152659910.1 | ISNCY family transposase KIS | Transposase |
| EQO00_RS15890 () | 3235879..3236019 | - | 141 | WP_000078852.1 | Hok/Gef family protein | - |
| EQO00_RS15895 () | 3236218..3239685 | - | 3468 | WP_152659911.1 | host specificity protein J | - |
| EQO00_RS15900 () | 3240108..3240740 | - | 633 | WP_136787914.1 | tail assembly protein | - |
| EQO00_RS15905 () | 3240686..3241429 | - | 744 | WP_086218606.1 | C40 family peptidase | - |
| EQO00_RS15910 () | 3241440..3242138 | - | 699 | WP_086258660.1 | phage minor tail protein L | - |
| EQO00_RS15915 () | 3242138..3242467 | - | 330 | WP_042965437.1 | phage tail protein | - |
| EQO00_RS15920 () | 3242464..3245109 | - | 2646 | WP_152659912.1 | phage tail tape measure protein | - |
| EQO00_RS15925 () | 3245153..3245461 | - | 309 | WP_046834383.1 | phage tail assembly protein T | - |
| EQO00_RS15930 () | 3245488..3245910 | - | 423 | WP_062872514.1 | phage minor tail protein G | - |
| EQO00_RS15935 () | 3245926..3246675 | - | 750 | WP_000174602.1 | phage tail protein | - |
| EQO00_RS15940 () | 3246683..3247081 | - | 399 | WP_001561860.1 | hypothetical protein | - |
| EQO00_RS15945 () | 3247091..3247717 | - | 627 | WP_086218552.1 | phage tail protein | - |
| EQO00_RS15950 () | 3247720..3248001 | - | 282 | WP_001281345.1 | DNA breaking-rejoining protein | - |
| EQO00_RS15955 () | 3247994..3248320 | - | 327 | WP_086218551.1 | DUF2190 family protein | - |
| EQO00_RS15960 () | 3248408..3250387 | - | 1980 | WP_136787890.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| EQO00_RS15965 () | 3250377..3251879 | - | 1503 | WP_000974563.1 | phage portal protein | - |
| EQO00_RS15970 () | 3251879..3252091 | - | 213 | WP_000102415.1 | hypothetical protein | - |
| EQO00_RS15975 () | 3252088..3254211 | - | 2124 | WP_001077608.1 | phage terminase large subunit family protein | - |
| EQO00_RS15980 () | 3254208..3254684 | - | 477 | WP_001561865.1 | DUF1441 family protein | - |
| EQO00_RS15990 () | 3255104..3255328 | - | 225 | WP_086218666.1 | hypothetical protein | - |
| EQO00_RS15995 () | 3255352..3255819 | - | 468 | WP_033885575.1 | lysis protein | - |
| EQO00_RS16000 () | 3255821..3255934 | - | 114 | WP_000675930.1 | hypothetical protein | - |
| EQO00_RS16005 () | 3256155..3256688 | - | 534 | WP_086218640.1 | lysozyme | - |
| EQO00_RS16010 () | 3256813..3257100 | + | 288 | WP_000406285.1 | hypothetical protein | - |
| EQO00_RS16015 () | 3257105..3257332 | - | 228 | WP_001371270.1 | DUF1327 domain-containing protein | - |
| EQO00_RS16020 () | 3257360..3257917 | - | 558 | WP_152659913.1 | hypothetical protein | - |
| EQO00_RS16025 () | 3257921..3258136 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| EQO00_RS16030 () | 3258212..3258496 | - | 285 | WP_000005635.1 | DUF826 domain-containing protein | - |
| EQO00_RS16035 () | 3258522..3258704 | - | 183 | WP_001379752.1 | DUF1378 family protein | - |
| EQO00_RS16040 () | 3258855..3260831 | - | 1977 | WP_152659914.1 | DUF1737 domain-containing protein | - |
| EQO00_RS16060 () | 3261689..3262747 | - | 1059 | WP_086258632.1 | site-specific DNA-methyltransferase | - |
| EQO00_RS16065 () | 3262898..3263095 | - | 198 | WP_000917768.1 | hypothetical protein | - |
| EQO00_RS16070 () | 3263325..3263885 | - | 561 | WP_000640044.1 | DUF1133 family protein | - |
| EQO00_RS16075 () | 3263894..3264253 | - | 360 | WP_000904153.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EQO00_RS16080 () | 3264266..3265315 | - | 1050 | WP_062872445.1 | DUF968 domain-containing protein | - |
| EQO00_RS16085 () | 3265317..3265595 | - | 279 | WP_062872446.1 | hypothetical protein | - |
| EQO00_RS16090 () | 3265777..3266058 | + | 282 | WP_062872444.1 | hypothetical protein | - |
| EQO00_RS16095 () | 3266360..3266713 | - | 354 | WP_086218523.1 | DUF551 domain-containing protein | - |
| EQO00_RS16100 () | 3266710..3267078 | - | 369 | WP_033805456.1 | hypothetical protein | - |
| EQO00_RS16105 () | 3267080..3267424 | - | 345 | WP_086218524.1 | ead/Ea22-like family protein | - |
| EQO00_RS16110 () | 3267411..3267740 | - | 330 | WP_033815700.1 | hypothetical protein | - |
| EQO00_RS16115 () | 3267737..3268414 | - | 678 | WP_064754123.1 | ead/Ea22-like family protein | - |
| EQO00_RS16120 () | 3268374..3268679 | - | 306 | WP_073614566.1 | DUF4406 domain-containing protein | - |
| EQO00_RS16125 () | 3268676..3268957 | - | 282 | WP_074431293.1 | DNA-binding protein | - |
| EQO00_RS16130 () | 3268990..3269703 | - | 714 | WP_086218525.1 | DUF1627 domain-containing protein | - |
| EQO00_RS16135 () | 3269737..3270279 | - | 543 | WP_072130322.1 | replication protein | - |
| EQO00_RS16140 () | 3270191..3271222 | - | 1032 | WP_001371296.1 | hypothetical protein | - |
| EQO00_RS16145 () | 3271291..3271716 | - | 426 | WP_000693925.1 | Rha family transcriptional regulator | - |
| EQO00_RS16150 () | 3271700..3271972 | - | 273 | WP_000887454.1 | helix-turn-helix domain-containing protein | - |
| EQO00_RS16155 () | 3272081..3272482 | + | 402 | WP_000986593.1 | helix-turn-helix domain-containing protein | - |
| EQO00_RS16160 () | 3272510..3272701 | + | 192 | WP_000100897.1 | hypothetical protein | Antitoxin Detail |
| EQO00_RS16165 () | 3272701..3272988 | + | 288 | WP_032351442.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EQO00_RS16170 () | 3273262..3273414 | + | 153 | WP_000380312.1 | DUF1391 family protein | - |
| EQO00_RS16175 () | 3273933..3274784 | + | 852 | WP_086218526.1 | Rha family phage regulatory protein | - |
| EQO00_RS16180 () | 3274795..3274983 | + | 189 | WP_086218527.1 | cell division inhibitor | - |
| EQO00_RS16185 () | 3274980..3275168 | + | 189 | WP_086218528.1 | DUF1482 family protein | - |
| EQO00_RS16190 () | 3275264..3277735 | + | 2472 | WP_152659915.1 | exonuclease | - |
| EQO00_RS16195 () | 3277802..3278053 | + | 252 | WP_000273163.1 | DUF4224 domain-containing protein | - |
| EQO00_RS16200 () | 3278022..3279041 | + | 1020 | WP_001367167.1 | hypothetical protein ; Integrase | Integrase |
| EQO00_RS16205 () | 3279449..3280108 | + | 660 | WP_000375136.1 | FtsH protease modulator YccA | - |
| EQO00_RS16210 () | 3280200..3280529 | + | 330 | WP_000904439.1 | sulfurtransferase TusE | - |
| EQO00_RS16215 () | 3280526..3280804 | - | 279 | WP_001519666.1 | acylphosphatase | - |
| EQO00_RS16220 () | 3280899..3282089 | + | 1191 | WP_000116317.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| EQO00_RS16225 () | 3282147..3282464 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| EQO00_RS16230 () | 3282509..3282922 | - | 414 | WP_000665218.1 | CoA-binding protein | - |
| EQO00_RS16235 () | 3283095..3283757 | + | 663 | WP_000847791.1 | DUF2057 family protein | - |
| EQO00_RS16240 () | 3283853..3284311 | + | 459 | WP_001295939.1 | methylglyoxal synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|