MGE detailed information
MGE type: Genomic_island MGE length: 21272 bp
Accession: NZ_CP035477 Location: 4926985..4948256 Organism: Escherichia coli strain U13A Replicon: chromosome
Accession: NZ_CP035477 Location: 4926985..4948256 Organism: Escherichia coli strain U13A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U13A_RS24515 () | 4922321..4922689 | + | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| U13A_RS24520 () | 4922779..4923156 | + | 378 | WP_000854759.1 | TA system toxin CbtA family protein | Toxin Detail |
| U13A_RS26995 () | 4923153..4923323 | + | 171 | WP_158604577.1 | hypothetical protein | - |
| U13A_RS24525 () | 4923338..4923763 | + | 426 | WP_000422741.1 | IS66 family insertion sequence hypothetical protein | - |
| U13A_RS24530 () | 4923760..4924110 | + | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| U13A_RS24535 () | 4924141..4925743 | + | 1603 | Protein_4688 | IS66-like element ISEc23 family transposase | - |
| U13A_RS24540 () | 4925775..4926170 | + | 396 | Protein_4689 | hypothetical protein | - |
| U13A_RS24545 () | 4926187..4926363 | + | 177 | WP_000839286.1 | DUF957 domain-containing protein | - |
| U13A_RS27000 () | 4926463..4926621 | + | 159 | WP_001467148.1 | hypothetical protein | - |
| U13A_RS24555 () | 4926985..4927161 | + | 177 | Protein_4692 | IS3 family transposase ISSen1 | Transposase |
| U13A_RS24560 () | 4927934..4929574 | + | 1641 | WP_001332039.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| U13A_RS24565 () | 4929567..4930757 | + | 1191 | WP_001295727.1 | DNA cytosine methyltransferase | - |
| U13A_RS24570 () | 4930770..4932509 | - | 1740 | WP_000781649.1 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| U13A_RS24575 () | 4932619..4933905 | - | 1287 | WP_000504875.1 | McrC family protein | - |
| U13A_RS24580 () | 4933898..4935973 | - | 2076 | WP_000366620.1 | AAA family ATPase | - |
| U13A_RS24590 () | 4937077..4937331 | - | 255 | WP_000788354.1 | hypothetical protein | VF |
| U13A_RS24595 () | 4937494..4938641 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| U13A_RS24600 () | 4938674..4938838 | + | 165 | Protein_4700 | GNAT family N-acetyltransferase | - |
| U13A_RS24605 () | 4939215..4939472 | + | 258 | WP_001054379.1 | YjhX family toxin | Toxin Detail |
| U13A_RS24610 () | 4939484..4940035 | + | 552 | WP_000123957.1 | N-acetyltransferase | Antitoxin Detail |
| U13A_RS24615 () | 4940087..4940833 | + | 747 | WP_000354249.1 | class I SAM-dependent methyltransferase | - |
| U13A_RS24620 () | 4940961..4941221 | + | 261 | WP_000077645.1 | hypothetical protein | - |
| U13A_RS27150 () | 4941259..4941375 | + | 117 | Protein_4705 | VOC family protein | - |
| U13A_RS24625 () | 4941620..4942741 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| U13A_RS24630 () | 4942738..4943016 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| U13A_RS24635 () | 4943028..4944341 | + | 1314 | WP_000460845.1 | galactitol-specific PTS transporter subunit IIC | - |
| U13A_RS24640 () | 4944354..4945160 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| U13A_RS24645 () | 4945291..4945722 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| U13A_RS24650 () | 4945734..4946366 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| U13A_RS24655 () | 4946383..4947165 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| U13A_RS24660 () | 4947468..4948256 | + | 789 | WP_000251799.1 | IclR family transcriptional regulator | - |
| U13A_RS24665 () | 4948261..4949166 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| U13A_RS24670 () | 4949177..4951144 | + | 1968 | WP_000116325.1 | xylonate dehydratase YjhG | - |
| U13A_RS24675 () | 4951251..4952600 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|