MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 75779 bp
Accession: NZ_CP035459 Location: 1..75779 Organism: Photobacterium damselae subsp. damselae strain KC-Na-NB1 Replicon: plasmid pFPPDNB1-1
Accession: NZ_CP035459 Location: 1..75779 Organism: Photobacterium damselae subsp. damselae strain KC-Na-NB1 Replicon: plasmid pFPPDNB1-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETN89_RS19600 () | 670..2130 | + | 1461 | WP_086368659.1 | hypothetical protein | VF |
| ETN89_RS19605 () | 2130..3293 | + | 1164 | WP_129382752.1 | hypothetical protein | - |
| ETN89_RS19610 () | 3283..3954 | + | 672 | WP_086368661.1 | hypothetical protein | - |
| ETN89_RS19615 () | 3947..5593 | + | 1647 | WP_157756353.1 | Type II secretion system protein E | VF |
| ETN89_RS19620 () | 5571..6605 | + | 1035 | WP_086368663.1 | hypothetical protein | - |
| ETN89_RS19625 () | 6642..7208 | + | 567 | WP_086368664.1 | hypothetical protein | - |
| ETN89_RS19630 () | 7210..7713 | + | 504 | WP_086368665.1 | hypothetical protein | - |
| ETN89_RS19635 () | 7710..8660 | + | 951 | WP_086368666.1 | type II secretion system GspH family protein | - |
| ETN89_RS19640 () | 8682..9089 | + | 408 | WP_086368667.1 | hypothetical protein | - |
| ETN89_RS19645 () | 9251..10312 | + | 1062 | WP_086368668.1 | trypsin-like serine protease | - |
| ETN89_RS19650 () | 10330..10605 | + | 276 | WP_086368669.1 | hypothetical protein | - |
| ETN89_RS19655 () | 10657..11337 | + | 681 | WP_086368670.1 | hypothetical protein | - |
| ETN89_RS19660 () | 11407..11682 | + | 276 | WP_086368671.1 | Hok/Gef family protein | - |
| ETN89_RS19665 () | 12302..12673 | + | 372 | WP_086368672.1 | single-stranded DNA-binding protein | - |
| ETN89_RS19670 () | 12728..13243 | + | 516 | WP_086368673.1 | DUF2726 domain-containing protein | - |
| ETN89_RS19675 () | 13247..13705 | + | 459 | WP_086368674.1 | thermonuclease family protein | - |
| ETN89_RS19680 () | 13721..14041 | + | 321 | WP_205849052.1 | hypothetical protein | - |
| ETN89_RS19685 () | 14068..16083 | + | 2016 | WP_086368675.1 | DNA topoisomerase 3 | - |
| ETN89_RS19690 () | 16178..16654 | + | 477 | WP_086368676.1 | hypothetical protein | - |
| ETN89_RS19695 () | 16799..19105 | + | 2307 | WP_086368677.1 | ATP-binding protein | - |
| ETN89_RS19700 () | 19116..19421 | + | 306 | WP_086368678.1 | hypothetical protein | - |
| ETN89_RS19705 () | 19441..19995 | + | 555 | WP_086368679.1 | OmpA family protein | - |
| ETN89_RS19710 () | 20009..20719 | + | 711 | WP_086368680.1 | hypothetical protein | - |
| ETN89_RS19715 () | 20709..24002 | + | 3294 | WP_086368681.1 | hypothetical protein | - |
| ETN89_RS19720 () | 24401..24967 | + | 567 | WP_086368682.1 | hypothetical protein | - |
| ETN89_RS19725 () | 25072..25770 | + | 699 | WP_086368683.1 | StbB | - |
| ETN89_RS19730 () | 25781..26338 | + | 558 | WP_086368684.1 | hypothetical protein | - |
| ETN89_RS19735 () | 26445..27197 | + | 753 | WP_086368685.1 | Type IV secretion system protein virB5 | VF |
| ETN89_RS19740 () | 27197..28225 | + | 1029 | WP_086368686.1 | type IV secretion system protein | - |
| ETN89_RS19745 () | 28774..29613 | - | 840 | WP_086368687.1 | DUF1738 domain-containing protein | - |
| ETN89_RS19750 () | 29704..30747 | + | 1044 | WP_086366242.1 | IS21 family transposase ISAeme17 | Transposase |
| ETN89_RS19755 () | 30734..31492 | + | 759 | WP_086366340.1 | IS21 family transposase ISKpn7 | Transposase |
| ETN89_RS19760 () | 31522..31713 | - | 192 | WP_129382754.1 | hypothetical protein | - |
| ETN89_RS19765 () | 32480..32926 | - | 447 | WP_129382755.1 | hypothetical protein | - |
| ETN89_RS19770 () | 32971..33177 | - | 207 | WP_129382756.1 | hypothetical protein | - |
| ETN89_RS19775 () | 33724..34356 | - | 633 | WP_129382757.1 | hypothetical protein | - |
| ETN89_RS19780 () | 34349..34576 | - | 228 | WP_129382758.1 | hypothetical protein | - |
| ETN89_RS19785 () | 34619..34927 | - | 309 | WP_129382759.1 | type I restriction endonuclease subunit M | - |
| ETN89_RS19790 () | 35191..35733 | - | 543 | Protein_39 | hypothetical protein | - |
| ETN89_RS19795 () | 36159..36425 | - | 267 | WP_129382760.1 | hypothetical protein | - |
| ETN89_RS19800 () | 36864..37871 | - | 1008 | WP_129382761.1 | hypothetical protein | - |
| ETN89_RS19805 () | 38016..38414 | - | 399 | WP_129382762.1 | hypothetical protein | - |
| ETN89_RS19810 () | 38411..38932 | - | 522 | WP_129382763.1 | ParA family protein | - |
| ETN89_RS19815 () | 39496..39714 | - | 219 | WP_086368796.1 | hypothetical protein | - |
| ETN89_RS19820 () | 39714..40202 | - | 489 | WP_086368795.1 | hypothetical protein | - |
| ETN89_RS19825 () | 40527..40802 | - | 276 | WP_086368794.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| ETN89_RS19830 () | 40799..40978 | - | 180 | WP_086368793.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ETN89_RS19835 () | 41140..41817 | - | 678 | WP_086368792.1 | CPBP family intramembrane metalloprotease | - |
| ETN89_RS19840 () | 42055..42944 | + | 890 | Protein_49 | IS630 family transposase ISVa15 | Transposase |
| ETN89_RS19845 () | 43278..43673 | - | 396 | WP_086368791.1 | hypothetical protein | - |
| ETN89_RS21345 () | 44903..45073 | + | 171 | WP_165001294.1 | hypothetical protein | - |
| ETN89_RS19855 () | 45463..46443 | - | 981 | WP_086368790.1 | hypothetical protein | - |
| ETN89_RS19860 () | 46440..47549 | - | 1110 | WP_086368789.1 | DUF3696 domain-containing protein | - |
| ETN89_RS19865 () | 47542..48669 | - | 1128 | WP_086368788.1 | DUF262 domain-containing protein | - |
| ETN89_RS19870 () | 48662..48820 | - | 159 | Protein_55 | restriction endonuclease subunit S | - |
| ETN89_RS19875 () | 49219..49590 | - | 372 | WP_086368786.1 | hypothetical protein | - |
| ETN89_RS19880 () | 49807..50291 | - | 485 | Protein_57 | DUF3387 domain-containing protein | - |
| ETN89_RS19885 () | 50568..51548 | + | 981 | WP_086368785.1 | Recombination-promoting nuclease RpnA | VF |
| ETN89_RS19890 () | 52298..53128 | - | 831 | WP_086368784.1 | hypothetical protein | - |
| ETN89_RS19895 () | 53776..54288 | + | 513 | WP_086368782.1 | hypothetical protein | - |
| ETN89_RS19900 () | 54522..54929 | - | 408 | WP_086368781.1 | helix-turn-helix domain-containing protein | - |
| ETN89_RS19905 () | 55196..55341 | + | 146 | Protein_62 | IS5/IS1182 family transposase | - |
| ETN89_RS19910 () | 55443..56042 | + | 600 | WP_086368780.1 | Type IV secretion system protein virB1 | VF |
| ETN89_RS19915 () | 56066..56401 | + | 336 | WP_086368779.1 | hypothetical protein | - |
| ETN89_RS19925 () | 56779..57372 | + | 594 | WP_086368777.1 | hypothetical protein | - |
| ETN89_RS19930 () | 57439..58482 | + | 1044 | WP_086366242.1 | IS21 family transposase ISAeme17 | Transposase |
| ETN89_RS19935 () | 58469..59227 | + | 759 | WP_086366340.1 | IS21 family transposase ISKpn7 | Transposase |
| ETN89_RS19945 () | 59511..60911 | + | 1401 | WP_086368645.1 | hypothetical protein | - |
| ETN89_RS19950 () | 61115..61663 | - | 549 | WP_086368646.1 | hypothetical protein | - |
| ETN89_RS19955 () | 61669..62406 | - | 738 | Protein_70 | DUF3387 domain-containing protein | - |
| ETN89_RS19960 () | 63105..63938 | - | 834 | WP_086368648.1 | hypothetical protein | - |
| ETN89_RS19965 () | 64377..65009 | - | 633 | WP_129382764.1 | helix-turn-helix domain-containing protein | - |
| ETN89_RS21350 () | 66076..66231 | + | 156 | WP_157756350.1 | hypothetical protein | - |
| ETN89_RS21355 () | 66377..66535 | + | 159 | WP_157756351.1 | hypothetical protein | - |
| ETN89_RS19970 () | 66657..66956 | + | 300 | WP_157756352.1 | Type IV secretion system protein virB2 | VF |
| ETN89_RS19975 () | 67009..67311 | + | 303 | WP_086368651.1 | VirB3 family type IV secretion system protein | - |
| ETN89_RS19980 () | 67308..69740 | + | 2433 | WP_086368652.1 | Type IV secretion system protein virB4 | VF |
| ETN89_RS19985 () | 69733..70443 | + | 711 | WP_086368653.1 | Type IV secretion system protein virB8 | VF |
| ETN89_RS19990 () | 70443..71330 | + | 888 | WP_086368654.1 | Type IV secretion system protein virB9 | VF |
| ETN89_RS19995 () | 71330..72502 | + | 1173 | WP_086368655.1 | Type IV secretion system protein virB10 | VF |
| ETN89_RS20000 () | 72510..73493 | + | 984 | WP_086368707.1 | Type IV secretion system protein VirB11 | VF |
| ETN89_RS20005 () | 73503..73733 | + | 231 | WP_086368656.1 | hypothetical protein | - |
| ETN89_RS20010 () | 73730..75586 | + | 1857 | WP_086368657.1 | Protein VirD4 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|