NZ_CP0352421163799..1335775

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 171977 bp
Accession: NZ_CP035242        Location: 1163799..1335775         Organism: Streptococcus pneumoniae strain TVO_1901947       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EQH38_RS06110 (EQH38_06455) 1159376..1159588 + 213 WP_000043230.1 exodeoxyribonuclease VII small subunit -
EQH38_RS06115 (EQH38_06460) 1159585..1160460 + 876 WP_000743814.1 polyprenyl synthetase family protein -
EQH38_RS06120 (EQH38_06465) 1160453..1161268 + 816 WP_001041079.1 TlyA family RNA methyltransferase -
EQH38_RS06125 (EQH38_06470) 1161261..1161692 + 432 WP_001034412.1 arginine repressor -
EQH38_RS06130 (EQH38_06475) 1161699..1163366 + 1668 WP_000923583.1 DNA repair protein RecN -
EQH38_RS06135 (EQH38_06480) 1163368..1164096 + 729 WP_000133343.1 metallophosphoesterase family protein -
EQH38_RS06140 (EQH38_06485) 1164175..1165998 + 1824 WP_001047204.1 translation elongation factor 4 -
EQH38_RS06145 1166079..1166366 - 288 WP_000693384.1 hypothetical protein -
EQH38_RS06150 (EQH38_06495) 1166632..1167021 + 390 WP_000888913.1 PTS sugar transporter subunit IIA -
EQH38_RS06155 (EQH38_06500) 1167059..1167361 + 303 WP_000590570.1 PTS sugar transporter subunit IIB -
EQH38_RS06160 (EQH38_06505) 1167369..1168174 + 806 Protein_1176 IS5 family transposase -
EQH38_RS06165 (EQH38_06510) 1168190..1168687 + 498 Protein_1177 aldose 1-epimerase family protein -
EQH38_RS06170 (EQH38_06515) 1168844..1169269 + 426 WP_000029272.1 galactose-6-phosphate isomerase subunit LacA -
EQH38_RS06175 (EQH38_06520) 1169300..1169815 + 516 WP_001216918.1 galactose-6-phosphate isomerase subunit LacB -
EQH38_RS06180 (EQH38_06525) 1169826..1170755 + 930 WP_000604266.1 tagatose-6-phosphate kinase -
EQH38_RS06185 (EQH38_06530) 1170757..1171737 + 981 WP_001229137.1 tagatose-bisphosphate aldolase -
EQH38_RS06190 (EQH38_06535) 1171971..1172807 + 837 WP_000285727.1 transcription antiterminator -
EQH38_RS06195 (EQH38_06540) 1172843..1173160 + 318 WP_001078331.1 PTS lactose/cellobiose transporter subunit IIA -
EQH38_RS06200 (EQH38_06545) 1173160..1174851 + 1692 WP_001037331.1 lactose-specific PTS transporter subunit EIIC -
EQH38_RS06205 (EQH38_06550) 1175066..1176472 + 1407 WP_000169247.1 6-phospho-beta-galactosidase -
EQH38_RS06210 1176593..1176700 + 108 WP_226373026.1 DUF3884 family protein -
EQH38_RS06215 (EQH38_06560) 1176979..1177740 - 762 WP_000917570.1 DeoR/GlpR family DNA-binding transcription regulator -
EQH38_RS06220 (EQH38_06570) 1178028..1178990 - 963 WP_000451369.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
EQH38_RS06225 (EQH38_06575) 1179178..1181337 - 2160 WP_000523249.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
EQH38_RS06230 (EQH38_06580) 1181418..1181636 - 219 WP_000259249.1 glutaredoxin-like protein NrdH -
EQH38_RS06235 (EQH38_06585) 1181987..1182250 + 264 WP_000146947.1 phosphocarrier protein HPr -
EQH38_RS06240 (EQH38_06590) 1182256..1183989 + 1734 WP_000138135.1 phosphoenolpyruvate--protein phosphotransferase -
EQH38_RS06245 (EQH38_06595) 1184243..1186693 + 2451 WP_054365865.1 pneumococcal histidine triad protein PhtA -
EQH38_RS06250 (EQH38_06600) 1186851..1189361 + 2511 WP_238097300.1 pneumococcal-type histidine triad protein -
EQH38_RS06255 (EQH38_06605) 1189783..1190163 + 381 WP_000443785.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
EQH38_RS06260 (EQH38_06610) 1190422..1191768 - 1347 WP_061815350.1 IS1380 family transposase ISSpn5 Transposase
EQH38_RS06265 (EQH38_06615) 1192330..1193043 + 714 WP_000499429.1 YjjG family noncanonical pyrimidine nucleotidase -
EQH38_RS06270 (EQH38_06620) 1193101..1193703 + 603 WP_054366177.1 hypothetical protein -
EQH38_RS06275 (EQH38_06625) 1193841..1194494 + 654 WP_001809694.1 uracil-DNA glycosylase -
EQH38_RS06280 (EQH38_06630) 1194504..1194968 + 465 WP_001135768.1 8-oxo-dGTP diphosphatase -
EQH38_RS06285 (EQH38_06635) 1194981..1196249 + 1269 WP_000924490.1 dihydroorotase -
EQH38_RS06290 (EQH38_06640) 1196263..1196523 + 261 WP_001105925.1 hypothetical protein -
EQH38_RS06295 (EQH38_06645) 1196534..1197895 + 1362 WP_000278537.1 sodium-coupled multidrug efflux MATE transporter PdrM -
EQH38_RS06300 (EQH38_06650) 1198049..1199017 + 969 WP_000105360.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
EQH38_RS06305 (EQH38_06655) 1199033..1200025 + 993 WP_054362637.1 alpha-ketoacid dehydrogenase subunit beta -
EQH38_RS06310 (EQH38_06660) 1200243..1201286 + 1044 WP_000752704.1 dihydrolipoamide acetyltransferase -
EQH38_RS06315 (EQH38_06665) 1201332..1203035 + 1704 WP_001162918.1 dihydrolipoyl dehydrogenase -
EQH38_RS06320 (EQH38_06670) 1203099..1204088 + 990 WP_000873985.1 Lipoate-protein ligase LplJ VF
EQH38_RS06325 (EQH38_06675) 1204163..1205233 - 1071 WP_000817882.1 Tyrosine recombinase XerS ; Integrase Integrase
EQH38_RS06330 (EQH38_06680) 1205817..1207367 - 1551 WP_000392532.1 ClC family H(+)/Cl(-) exchange transporter -
EQH38_RS06335 (EQH38_06685) 1207383..1208162 - 780 WP_000201139.1 ribonuclease HII -
EQH38_RS06340 (EQH38_06690) 1208149..1209000 - 852 WP_061367509.1 Ribosome biogenesis GTPase A VF
EQH38_RS06345 (EQH38_06700) 1209447..1215338 - 5892 WP_238097301.1 Immunoglobulin A1 protease VF
EQH38_RS06350 (EQH38_06705) 1215547..1216725 - 1179 WP_000174755.1 hypothetical protein -
EQH38_RS06355 (EQH38_06715) 1216895..1220545 - 3651 WP_054366612.1 helicase-exonuclease AddAB subunit AddA -
EQH38_RS06360 (EQH38_06720) 1220542..1223817 - 3276 WP_238097302.1 ATP-dependent nuclease subunit B -
EQH38_RS06365 (EQH38_06725) 1224017..1224172 - 156 Protein_1217 diacylglycerol kinase family lipid kinase -
EQH38_RS06370 (EQH38_06735) 1224343..1225189 + 847 Protein_1218 IS630 family transposase -
EQH38_RS06375 (EQH38_06740) 1225089..1225535 + 447 WP_001813463.1 tyrosine-type recombinase/integrase -
EQH38_RS06380 (EQH38_06745) 1225673..1226977 - 1305 WP_000022813.1 phosphopyruvate hydratase -
EQH38_RS06385 (EQH38_06750) 1227141..1227587 + 447 WP_000131076.1 YueI family protein -
EQH38_RS06390 (EQH38_06755) 1227584..1228699 - 1116 WP_061367507.1 glycerate kinase -
EQH38_RS06395 1228708..1228911 - 204 WP_226372072.1 HAD hydrolase family protein -
EQH38_RS06400 1228982..1229353 - 372 WP_001808482.1 Phosphoserine phosphatase VF
EQH38_RS06405 (EQH38_06765) 1229412..1230845 - 1434 WP_000697295.1 glycogen synthase GlgA -
EQH38_RS06410 (EQH38_06770) 1230842..1231981 - 1140 WP_000687067.1 glucose-1-phosphate adenylyltransferase subunit GlgD -
EQH38_RS06415 (EQH38_06775) 1231971..1233113 - 1143 WP_054366610.1 glucose-1-phosphate adenylyltransferase -
EQH38_RS06420 (EQH38_06780) 1233103..1235031 - 1929 WP_000370257.1 1,4-alpha-glucan branching protein GlgB -
EQH38_RS06425 (EQH38_06785) 1235407..1236831 - 1425 WP_000199371.1 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase -
EQH38_RS06430 (EQH38_06790) 1237376..1239655 - 2280 WP_000283071.1 type I pullulanase -
EQH38_RS06435 (EQH38_06795) 1239767..1241725 - 1959 WP_001042594.1 NAD-dependent DNA ligase LigA -
EQH38_RS06440 (EQH38_06800) 1241818..1242996 - 1179 WP_001083019.1 MFS transporter -
EQH38_RS06445 (EQH38_06805) 1243076..1243939 - 864 WP_014947332.1 XRE/MutR family transcriptional regulator -
EQH38_RS06450 (EQH38_06810) 1243942..1245843 - 1902 WP_000584855.1 ABC-F family ATP-binding cassette domain-containing protein -
EQH38_RS06455 (EQH38_06815) 1246273..1246548 - 276 WP_001284639.1 HU family DNA-binding protein -
EQH38_RS06460 (EQH38_06820) 1246655..1247494 - 840 WP_054366173.1 DegV family protein -
EQH38_RS06465 (EQH38_06825) 1247636..1248484 + 849 WP_000592059.1 YitT family protein -
EQH38_RS06470 (EQH38_06830) 1248577..1249494 - 918 WP_000587444.1 bifunctional riboflavin kinase/FAD synthetase -
EQH38_RS06475 (EQH38_06840) 1250342..1250635 - 294 WP_000916509.1 50S ribosomal protein L27 -
EQH38_RS06480 (EQH38_06845) 1250652..1250996 - 345 WP_000613700.1 ribosomal-processing cysteine protease Prp -
EQH38_RS06485 (EQH38_06850) 1251012..1251326 - 315 WP_000109141.1 50S ribosomal protein L21 -
EQH38_RS06490 (EQH38_06855) 1251514..1252212 - 699 WP_078102623.1 YoaK family protein -
EQH38_RS06495 (EQH38_06860) 1252614..1252913 + 300 WP_001850415.1 YbaB/EbfC family nucleoid-associated protein -
EQH38_RS06500 (EQH38_06865) 1253254..1254228 - 975 WP_000451584.1 phosphate acetyltransferase -
EQH38_RS06505 (EQH38_06870) 1254272..1255168 - 897 WP_001210006.1 RluA family pseudouridine synthase -
EQH38_RS06510 (EQH38_06875) 1255165..1255983 - 819 WP_000799053.1 NAD kinase -
EQH38_RS06515 (EQH38_06880) 1255967..1256638 - 672 WP_000171676.1 GTP pyrophosphokinase family protein -
EQH38_RS06520 (EQH38_06885) 1256766..1257335 + 570 WP_000681292.1 CYTH domain-containing protein -
EQH38_RS06525 (EQH38_06890) 1257448..1258407 + 960 WP_001283813.1 ribose-phosphate diphosphokinase -
EQH38_RS06530 (EQH38_06895) 1258417..1259532 + 1116 WP_000639661.1 cysteine desulfurase family protein -
EQH38_RS06535 (EQH38_06900) 1259537..1259883 + 347 Protein_1251 DUF1831 domain-containing protein -
EQH38_RS06540 (EQH38_06905) 1259891..1260106 + 216 WP_000462488.1 DUF4649 family protein -
EQH38_RS06545 (EQH38_06910) 1260190..1260831 + 642 WP_050237346.1 redox-sensing transcriptional repressor Rex -
EQH38_RS06550 (EQH38_06915) 1260849..1261538 + 690 WP_050237345.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
EQH38_RS06555 (EQH38_06920) 1261535..1262215 - 681 WP_000286922.1 DNA repair protein RadC -
EQH38_RS06560 (EQH38_06925) 1262258..1264549 - 2292 WP_054366172.1 DNA helicase PcrA -
EQH38_RS06565 (EQH38_06930) 1264740..1265545 - 806 Protein_1257 IS5 family transposase -
EQH38_RS06570 (EQH38_06940) 1265926..1266786 - 861 WP_000631543.1 methionyl aminopeptidase -
EQH38_RS06575 (EQH38_06945) 1266802..1268079 - 1278 WP_000033830.1 CBS-HotDog domain-containing transcription factor SpxR -
EQH38_RS06580 (EQH38_06950) 1268072..1268623 - 552 WP_001028733.1 GNAT family N-acetyltransferase -
EQH38_RS06585 (EQH38_06955) 1268639..1269898 - 1260 WP_001227083.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
EQH38_RS10795 1270041..1270166 + 126 WP_001859532.1 hypothetical protein -
EQH38_RS06590 (EQH38_06960) 1270947..1271105 - 159 WP_001808548.1 hypothetical protein -
EQH38_RS06595 (EQH38_06965) 1271115..1272425 - 1311 WP_033623099.1 GTPase ObgE -
EQH38_RS06600 (EQH38_06970) 1272489..1272623 - 135 WP_000863859.1 DUF4044 domain-containing protein -
EQH38_RS06605 (EQH38_06975) 1272682..1272858 - 177 WP_001256250.1 PspC domain-containing protein -
EQH38_RS06610 (EQH38_06980) 1272889..1274214 - 1326 WP_001219433.1 glycosyltransferase family 4 protein -
EQH38_RS06615 (EQH38_06985) 1274230..1275273 - 1044 WP_001813176.1 alpha-galactosylglucosyldiacylglycerol synthase -
EQH38_RS06620 (EQH38_06990) 1275388..1275717 - 330 WP_000331928.1 metal-sulfur cluster assembly factor -
EQH38_RS06625 (EQH38_06995) 1275731..1276840 - 1110 WP_000201896.1 RNA polymerase sigma factor RpoD -
EQH38_RS06630 (EQH38_07000) 1276843..1278603 - 1761 WP_061367448.1 DNA primase -
EQH38_RS06635 (EQH38_07005) 1278711..1279664 - 954 WP_001155321.1 IS30 family transposase ISSpn8 Transposase
EQH38_RS06640 (EQH38_07010) 1279938..1280696 - 759 WP_054366168.1 ABC transporter ATP-binding protein -
EQH38_RS06645 (EQH38_07015) 1280693..1281559 - 867 WP_016569685.1 ABC transporter permease -
EQH38_RS06650 (EQH38_07020) 1281628..1282632 - 1005 WP_000792159.1 hypothetical protein VF
EQH38_RS06655 (EQH38_07025) 1283045..1285741 - 2697 WP_238097303.1 phosphoenolpyruvate carboxylase -
EQH38_RS06660 (EQH38_07030) 1285761..1286990 - 1230 WP_000703358.1 FtsW/RodA/SpoVE family cell cycle protein -
EQH38_RS06665 (EQH38_07035) 1287134..1287444 - 311 Protein_1278 transposase family protein -
EQH38_RS06670 (EQH38_07040) 1287484..1289286 - 1803 WP_054362630.1 hypothetical protein ; Integrase Integrase
EQH38_RS06675 (EQH38_07050) 1289779..1290000 - 222 WP_000286251.1 helix-turn-helix transcriptional regulator -
EQH38_RS06680 (EQH38_07055) 1290659..1291870 - 1212 WP_000687010.1 MFS transporter -
EQH38_RS06685 (EQH38_07060) 1292253..1292882 - 630 WP_170835798.1 Putative acetyltransferase EpsM VF
EQH38_RS06690 (EQH38_07065) 1292918..1294117 - 1200 WP_000238677.1 ATP-grasp domain-containing protein -
EQH38_RS06695 (EQH38_07070) 1294132..1295082 - 951 WP_000389975.1 hypothetical protein -
EQH38_RS06700 (EQH38_07075) 1295072..1296295 - 1224 WP_000252068.1 ATP phosphoribosyltransferase regulatory subunit -
EQH38_RS06705 (EQH38_07080) 1296297..1297592 - 1296 WP_225349801.1 AMP-binding protein -
EQH38_RS06710 (EQH38_07085) 1297615..1298721 - 1107 WP_000444113.1 hypothetical protein -
EQH38_RS06715 (EQH38_07090) 1298750..1300642 - 1893 WP_000710678.1 hypothetical protein -
EQH38_RS06720 (EQH38_07095) 1300665..1301447 - 783 WP_000809423.1 sugar phosphate isomerase/epimerase -
EQH38_RS06725 (EQH38_07100) 1301457..1302065 - 609 WP_000709470.1 PIG-L family deacetylase -
EQH38_RS06730 (EQH38_07105) 1302067..1303302 - 1236 WP_238097304.1 UDP binding domain-containing protein -
EQH38_RS06735 1303461..1303532 - 72 WP_001809668.1 peptide pheromone SHP3 -
EQH38_RS06740 (EQH38_07110) 1303613..1304464 + 852 WP_054366167.1 Rgg/GadR/MutR family transcriptional regulator -
EQH38_RS06745 (EQH38_07115) 1304839..1306002 - 1164 Protein_1294 group II intron reverse transcriptase/maturase -
EQH38_RS06750 (EQH38_07120) 1306810..1307488 - 679 Protein_1295 helix-turn-helix transcriptional regulator -
EQH38_RS06755 (EQH38_07125) 1307556..1309379 - 1824 WP_000237147.1 SAG1250 family conjugative relaxase -
EQH38_RS06760 (EQH38_07130) 1309366..1309731 - 366 WP_000431637.1 MobC family plasmid mobilization relaxosome protein -
EQH38_RS06765 (EQH38_07135) 1309736..1310092 - 357 WP_001115086.1 SAG1252 family conjugative relaxosome accessory protein -
EQH38_RS06770 (EQH38_07145) 1310986..1312524 - 1539 WP_001279800.1 UvrD-helicase domain-containing protein -
EQH38_RS06775 (EQH38_07150) 1312517..1314274 - 1758 WP_000394602.1 AAA family ATPase -
EQH38_RS06780 (EQH38_07155) 1314264..1315040 - 777 WP_054365402.1 type II toxin-antitoxin system toxin PezT Toxin Detail
EQH38_RS06785 (EQH38_07160) 1315040..1315516 - 477 WP_000579612.1 type II toxin-antitoxin system antitoxin PezA Antitoxin Detail
EQH38_RS06790 (EQH38_07165) 1315961..1316386 - 426 Protein_1303 hypothetical protein -
EQH38_RS06795 (EQH38_07170) 1316363..1317096 - 734 Protein_1304 alpha amylase N-terminal ig-like domain-containing protein -
EQH38_RS06800 (EQH38_07175) 1317259..1318143 - 885 WP_000710115.1 diacylglycerol kinase family lipid kinase -
EQH38_RS06805 (EQH38_07180) 1318255..1319109 - 855 WP_000900015.1 ADP-ribosylglycohydrolase family protein -
EQH38_RS06810 (EQH38_07185) 1319167..1319925 - 759 WP_000262027.1 ATP-grasp domain-containing protein -
EQH38_RS06815 (EQH38_07190) 1319987..1320175 - 189 WP_000179769.1 hypothetical protein -
EQH38_RS06820 (EQH38_07195) 1320497..1321063 - 567 WP_000234983.1 hypothetical protein -
EQH38_RS06825 (EQH38_07200) 1321331..1323010 - 1680 WP_000031854.1 Tn3 family transposase TnpR_ISAcsp1 Transposase
EQH38_RS06830 (EQH38_07205) 1323102..1323263 - 162 WP_000368174.1 hypothetical protein -
EQH38_RS06835 (EQH38_07210) 1323947..1324651 - 705 WP_000224679.1 phage replisome organizer N-terminal domain-containing protein -
EQH38_RS06840 (EQH38_07215) 1324778..1325305 - 528 Protein_1313 PcfB family protein -
EQH38_RS06845 1325491..1325664 - 174 WP_001042635.1 hypothetical protein -
EQH38_RS06850 (EQH38_07220) 1325738..1326625 - 888 Protein_1315 nickase -
EQH38_RS06855 (EQH38_07225) 1326898..1327692 - 795 WP_000677518.1 putative siderophore transport system ATP-binding protein YusV VF
EQH38_RS06860 (EQH38_07230) 1327692..1328699 - 1008 WP_001180357.1 putative siderophore transport system permease protein YfhA VF
EQH38_RS06865 (EQH38_07235) 1328699..1329706 - 1008 WP_001244693.1 Ferric enterobactin transport system permease protein FepD VF
EQH38_RS06870 (EQH38_07240) 1329696..1330721 - 1026 WP_000790742.1 iron-siderophore ABC transporter substrate-binding protein -
EQH38_RS06875 (EQH38_07250) 1331114..1331332 - 219 WP_001207345.1 helix-turn-helix transcriptional regulator -
EQH38_RS06880 (EQH38_07255) 1331578..1331856 - 279 WP_000710807.1 hypothetical protein -
EQH38_RS06885 (EQH38_07260) 1332070..1333701 - 1632 WP_000914565.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
EQH38_RS06890 (EQH38_07265) 1333775..1334749 - 975 WP_001227760.1 DUF1002 domain-containing protein -
EQH38_RS06895 (EQH38_07270) 1334823..1335437 - 615 WP_000476374.1 cell wall hydrolase Pmp23 -
EQH38_RS06900 (EQH38_07275) 1335437..1336411 - 975 WP_238097305.1 nucleoid-associated protein -
EQH38_RS06905 (EQH38_07280) 1336419..1337675 - 1257 WP_000575519.1 serine hydroxymethyltransferase -
EQH38_RS06910 (EQH38_07285) 1337736..1338167 - 432 WP_000942937.1 GNAT family N-acetyltransferase -
EQH38_RS06915 (EQH38_07290) 1338169..1338771 - 603 WP_000969309.1 L-threonylcarbamoyladenylate synthase -
EQH38_RS06920 (EQH38_07295) 1338755..1339594 - 840 WP_000761908.1 peptide chain release factor N(5)-glutamine methyltransferase -
EQH38_RS06925 (EQH38_07300) 1339594..1340673 - 1080 WP_001028801.1 peptide chain release factor 1 -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance