MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 137154 bp
Accession: NZ_CP035236 Location: 953898..1091051 Organism: Streptococcus pneumoniae strain TVO_1902282 Replicon: chromosome
Accession: NZ_CP035236 Location: 953898..1091051 Organism: Streptococcus pneumoniae strain TVO_1902282 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH44_RS04800 (EQH44_05105) | 949115..949954 | + | 840 | WP_000761910.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| EQH44_RS04805 (EQH44_05110) | 949938..950540 | + | 603 | WP_000567066.1 | L-threonylcarbamoyladenylate synthase | - |
| EQH44_RS04810 (EQH44_05115) | 950542..950973 | + | 432 | WP_000942928.1 | GNAT family N-acetyltransferase | - |
| EQH44_RS04815 (EQH44_05120) | 951035..952291 | + | 1257 | WP_000575518.1 | serine hydroxymethyltransferase | - |
| EQH44_RS04820 (EQH44_05125) | 952299..953273 | + | 975 | WP_001812264.1 | nucleoid-associated protein | - |
| EQH44_RS04825 (EQH44_05130) | 953273..953887 | + | 615 | WP_000476387.1 | cell wall hydrolase Pmp23 | - |
| EQH44_RS04830 (EQH44_05135) | 953961..954935 | + | 975 | WP_001227766.1 | DUF1002 domain-containing protein | - |
| EQH44_RS04835 (EQH44_05140) | 955009..956640 | + | 1632 | WP_000914579.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| EQH44_RS04840 (EQH44_05150) | 957378..957595 | + | 218 | Protein_967 | helix-turn-helix transcriptional regulator | - |
| EQH44_RS04845 (EQH44_05160) | 957988..959013 | + | 1026 | WP_000790743.1 | ABC transporter substrate-binding protein | - |
| EQH44_RS04850 (EQH44_05165) | 959003..960010 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| EQH44_RS04855 (EQH44_05170) | 960010..961017 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| EQH44_RS04860 (EQH44_05175) | 961017..961811 | + | 795 | WP_000677519.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| EQH44_RS04865 | 961962..962146 | + | 185 | Protein_972 | IS3 family transposase | - |
| EQH44_RS04870 (EQH44_05180) | 962199..962624 | + | 426 | WP_074192621.1 | restriction endonuclease subunit S | - |
| EQH44_RS04875 (EQH44_05185) | 962680..962997 | + | 318 | WP_000968321.1 | DUF3847 domain-containing protein | - |
| EQH44_RS04880 (EQH44_05190) | 963307..964947 | + | 1641 | Protein_975 | MobA/MobL family protein | - |
| EQH44_RS04885 | 965021..965194 | + | 174 | WP_001042635.1 | hypothetical protein | - |
| EQH44_RS04890 (EQH44_05195) | 965380..965907 | + | 528 | WP_000606578.1 | PcfB family protein | - |
| EQH44_RS04895 (EQH44_05200) | 966360..967313 | + | 954 | WP_054363775.1 | IS30 family transposase ISSpn8 | Transposase |
| EQH44_RS04900 (EQH44_05205) | 967328..968008 | + | 681 | WP_000502597.1 | phage replisome organizer N-terminal domain-containing protein | - |
| EQH44_RS04905 (EQH44_05210) | 968692..968853 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| EQH44_RS04910 (EQH44_05215) | 968945..970624 | + | 1680 | WP_000031840.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| EQH44_RS04915 (EQH44_05220) | 970892..971458 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| EQH44_RS04920 (EQH44_05225) | 971780..971968 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| EQH44_RS04925 (EQH44_05230) | 972030..972788 | + | 759 | WP_000262004.1 | ATP-grasp domain-containing protein | - |
| EQH44_RS04930 (EQH44_05235) | 972846..973700 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| EQH44_RS04935 (EQH44_05240) | 973812..974696 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
| EQH44_RS04940 (EQH44_05245) | 974859..976598 | + | 1740 | Protein_987 | glycoside hydrolase family 13 protein | - |
| EQH44_RS04945 (EQH44_05250) | 976873..977328 | + | 456 | WP_000500474.1 | hypothetical protein | - |
| EQH44_RS04950 (EQH44_05255) | 977773..978249 | + | 477 | WP_000579613.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| EQH44_RS04955 (EQH44_05260) | 978249..979010 | + | 762 | WP_000405362.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| EQH44_RS04960 | 979038..979328 | + | 291 | WP_001213954.1 | hypothetical protein | - |
| EQH44_RS04965 | 979322..980194 | + | 873 | WP_001811494.1 | hypothetical protein | - |
| EQH44_RS04970 (EQH44_05275) | 981013..981372 | + | 360 | WP_000003745.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| EQH44_RS04975 (EQH44_05280) | 981382..981747 | + | 366 | WP_000263048.1 | MobC family plasmid mobilization relaxosome protein | - |
| EQH44_RS04980 (EQH44_05285) | 981734..983584 | + | 1851 | WP_000261804.1 | SAG1250 family conjugative relaxase | - |
| EQH44_RS04985 (EQH44_05290) | 983840..985272 | + | 1433 | Protein_996 | IS1182 family transposase | - |
| EQH44_RS04990 (EQH44_05300) | 985965..986918 | - | 954 | WP_054363775.1 | IS30 family transposase ISSpn8 | Transposase |
| EQH44_RS04995 (EQH44_05305) | 987406..987705 | + | 300 | WP_001138382.1 | hypothetical protein | - |
| EQH44_RS05000 (EQH44_05310) | 987764..988438 | + | 675 | WP_000903082.1 | CatA-like O-acetyltransferase | - |
| EQH44_RS05005 (EQH44_05315) | 988506..990143 | + | 1638 | WP_000021543.1 | methionine--tRNA ligase | - |
| EQH44_RS05010 (EQH44_05320) | 990244..991011 | + | 768 | WP_001061789.1 | tyrosine-protein phosphatase | - |
| EQH44_RS05015 (EQH44_05325) | 992028..993020 | + | 993 | Protein_1002 | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA | VF |
| EQH44_RS05020 (EQH44_05330) | 993022..993839 | + | 818 | Protein_1003 | ABC-2 family transporter protein | - |
| EQH44_RS05025 (EQH44_05335) | 993841..994626 | + | 786 | WP_000760754.1 | ABC transporter permease | - |
| EQH44_RS05030 (EQH44_05340) | 995005..996255 | - | 1251 | Protein_1005 | IS110 family transposase | - |
| EQH44_RS05035 (EQH44_05345) | 996702..996905 | + | 204 | WP_000275922.1 | helix-turn-helix transcriptional regulator | - |
| EQH44_RS05040 | 997036..997188 | + | 153 | WP_001812617.1 | hypothetical protein | - |
| EQH44_RS05045 (EQH44_05350) | 997355..999148 | + | 1794 | WP_000740021.1 | hypothetical protein ; Integrase | Integrase |
| EQH44_RS05050 (EQH44_05355) | 999232..999840 | + | 609 | WP_000662945.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| EQH44_RS05055 (EQH44_05360) | 999954..1000340 | + | 387 | Protein_1010 | phosphotransferase | - |
| EQH44_RS05060 (EQH44_05365) | 1000463..1000792 | + | 330 | Protein_1011 | IS5 family transposase IS1381A | Transposase |
| EQH44_RS05065 (EQH44_05370) | 1000920..1002149 | + | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| EQH44_RS05070 (EQH44_05375) | 1002169..1004865 | + | 2697 | WP_000058201.1 | phosphoenolpyruvate carboxylase | - |
| EQH44_RS05075 (EQH44_05380) | 1005223..1006479 | - | 1257 | WP_000436244.1 | ISL3 family transposase IS1167A | Transposase |
| EQH44_RS05080 (EQH44_05385) | 1006699..1007703 | + | 1005 | WP_000792154.1 | hypothetical protein | VF |
| EQH44_RS05085 (EQH44_05390) | 1007772..1008641 | + | 870 | WP_100931660.1 | ABC transporter permease | - |
| EQH44_RS05090 (EQH44_05395) | 1008638..1009396 | + | 759 | WP_000125400.1 | ABC transporter ATP-binding protein | - |
| EQH44_RS05095 (EQH44_05400) | 1009486..1011246 | + | 1761 | WP_000227905.1 | DNA primase | - |
| EQH44_RS05100 (EQH44_05405) | 1011249..1012358 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| EQH44_RS05105 (EQH44_05410) | 1012372..1012701 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| EQH44_RS05110 (EQH44_05415) | 1012816..1013859 | + | 1044 | WP_000412279.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| EQH44_RS05115 (EQH44_05420) | 1013875..1015200 | + | 1326 | WP_001219434.1 | glycosyltransferase family 4 protein | - |
| EQH44_RS05120 (EQH44_05425) | 1015231..1015407 | + | 177 | WP_001256251.1 | PspC domain-containing protein | - |
| EQH44_RS05125 (EQH44_05430) | 1015466..1015600 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| EQH44_RS05130 (EQH44_05435) | 1015664..1016974 | + | 1311 | WP_000061646.1 | GTPase ObgE | - |
| EQH44_RS05135 (EQH44_05440) | 1016984..1017142 | + | 159 | WP_001808548.1 | hypothetical protein | - |
| EQH44_RS05140 (EQH44_05445) | 1017194..1018520 | - | 1327 | Protein_1027 | transposase | - |
| EQH44_RS05145 (EQH44_05450) | 1019722..1020981 | + | 1260 | WP_001227083.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EQH44_RS05150 (EQH44_05455) | 1020997..1021548 | + | 552 | WP_001028733.1 | GNAT family N-acetyltransferase | - |
| EQH44_RS05155 (EQH44_05460) | 1021541..1022818 | + | 1278 | WP_000033830.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| EQH44_RS05160 (EQH44_05465) | 1022834..1023694 | + | 861 | WP_000631543.1 | methionyl aminopeptidase | - |
| EQH44_RS05165 (EQH44_05475) | 1024075..1024879 | + | 805 | WP_100931699.1 | IS5 family transposase | - |
| EQH44_RS05170 (EQH44_05480) | 1025070..1027361 | + | 2292 | WP_000992876.1 | DNA helicase PcrA | - |
| EQH44_RS05175 (EQH44_05485) | 1027404..1028084 | + | 681 | WP_000286922.1 | DNA repair protein RadC | - |
| EQH44_RS05180 (EQH44_05490) | 1028081..1028770 | - | 690 | WP_000743316.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| EQH44_RS05185 (EQH44_05495) | 1028788..1029429 | - | 642 | WP_000653403.1 | redox-sensing transcriptional repressor Rex | - |
| EQH44_RS05190 (EQH44_05500) | 1029512..1029727 | - | 216 | WP_000462488.1 | DUF4649 family protein | - |
| EQH44_RS05195 (EQH44_05505) | 1029735..1030082 | - | 348 | WP_000863509.1 | DUF1831 domain-containing protein | - |
| EQH44_RS05200 (EQH44_05510) | 1030087..1031202 | - | 1116 | WP_000639662.1 | cysteine desulfurase family protein | - |
| EQH44_RS05205 (EQH44_05515) | 1031212..1032171 | - | 960 | WP_001283813.1 | ribose-phosphate diphosphokinase | - |
| EQH44_RS05210 (EQH44_05520) | 1032284..1032853 | - | 570 | WP_000681292.1 | CYTH domain-containing protein | - |
| EQH44_RS05215 (EQH44_05525) | 1032981..1033652 | + | 672 | WP_000171676.1 | GTP pyrophosphokinase family protein | - |
| EQH44_RS05220 (EQH44_05530) | 1033636..1034454 | + | 819 | WP_000799053.1 | NAD kinase | - |
| EQH44_RS05225 (EQH44_05535) | 1034451..1035347 | + | 897 | WP_001210007.1 | RluA family pseudouridine synthase | - |
| EQH44_RS05230 (EQH44_05540) | 1035391..1036365 | + | 975 | WP_000451584.1 | phosphate acetyltransferase | - |
| EQH44_RS05235 (EQH44_05545) | 1036706..1037005 | - | 300 | WP_000981526.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EQH44_RS05240 (EQH44_05550) | 1037407..1038105 | + | 699 | WP_078372809.1 | YoaK family protein | - |
| EQH44_RS05245 (EQH44_05555) | 1038293..1038607 | + | 315 | WP_000109141.1 | 50S ribosomal protein L21 | - |
| EQH44_RS05250 (EQH44_05560) | 1038623..1038967 | + | 345 | WP_000613699.1 | ribosomal-processing cysteine protease Prp | - |
| EQH44_RS05255 (EQH44_05565) | 1038984..1039277 | + | 294 | WP_000916509.1 | 50S ribosomal protein L27 | - |
| EQH44_RS05260 (EQH44_05575) | 1039623..1039793 | - | 171 | WP_000123636.1 | hypothetical protein | - |
| EQH44_RS05265 (EQH44_05580) | 1040231..1041148 | + | 918 | WP_000587444.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| EQH44_RS05270 (EQH44_05585) | 1041241..1042089 | - | 849 | WP_000592056.1 | YitT family protein | - |
| EQH44_RS05275 (EQH44_05590) | 1042231..1043070 | + | 840 | WP_000161400.1 | DegV family protein | - |
| EQH44_RS05280 (EQH44_05595) | 1043177..1043452 | + | 276 | WP_001284639.1 | HU family DNA-binding protein | - |
| EQH44_RS05285 (EQH44_05600) | 1043880..1045781 | + | 1902 | WP_000584852.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| EQH44_RS05290 (EQH44_05605) | 1045784..1046647 | + | 864 | WP_000400550.1 | XRE/MutR family transcriptional regulator | - |
| EQH44_RS05295 (EQH44_05610) | 1046727..1047905 | + | 1179 | WP_001083017.1 | MFS transporter | - |
| EQH44_RS05300 (EQH44_05615) | 1047998..1049956 | + | 1959 | WP_001042599.1 | NAD-dependent DNA ligase LigA | - |
| EQH44_RS05305 (EQH44_05620) | 1050068..1052347 | + | 2280 | WP_054380349.1 | type I pullulanase | - |
| EQH44_RS05310 (EQH44_05625) | 1052891..1054315 | + | 1425 | WP_000199383.1 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | - |
| EQH44_RS05315 (EQH44_05635) | 1054764..1056692 | + | 1929 | WP_000370271.1 | 1,4-alpha-glucan branching protein GlgB | - |
| EQH44_RS05320 (EQH44_05640) | 1056682..1057824 | + | 1143 | WP_000787245.1 | glucose-1-phosphate adenylyltransferase | - |
| EQH44_RS05325 (EQH44_05645) | 1057814..1058953 | + | 1140 | WP_000687070.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| EQH44_RS05330 (EQH44_05650) | 1058950..1060383 | + | 1434 | WP_000697295.1 | glycogen synthase GlgA | - |
| EQH44_RS05335 | 1060442..1060813 | + | 372 | WP_001812249.1 | Phosphoserine phosphatase | VF |
| EQH44_RS05340 | 1060883..1061086 | + | 204 | WP_196299506.1 | HAD hydrolase family protein | - |
| EQH44_RS05345 (EQH44_05660) | 1061095..1062211 | + | 1117 | Protein_1068 | glycerate kinase | - |
| EQH44_RS05350 (EQH44_05665) | 1062208..1062654 | - | 447 | WP_000131076.1 | YueI family protein | - |
| EQH44_RS05355 (EQH44_05670) | 1062818..1064122 | + | 1305 | WP_000022815.1 | phosphopyruvate hydratase | - |
| EQH44_RS05360 (EQH44_05675) | 1064297..1065603 | - | 1307 | Protein_1071 | transposase | - |
| EQH44_RS05365 (EQH44_05680) | 1065727..1066482 | - | 756 | Protein_1072 | IS630 family transposase | - |
| EQH44_RS05370 (EQH44_05690) | 1066653..1066808 | + | 156 | Protein_1073 | diacylglycerol kinase family lipid kinase | - |
| EQH44_RS05375 (EQH44_05695) | 1067008..1070283 | + | 3276 | WP_000772324.1 | ATP-dependent nuclease subunit B | - |
| EQH44_RS05380 (EQH44_05700) | 1070280..1073930 | + | 3651 | WP_000767234.1 | helicase-exonuclease AddAB subunit AddA | - |
| EQH44_RS05385 (EQH44_05705) | 1074145..1075323 | + | 1179 | WP_000174792.1 | hypothetical protein | - |
| EQH44_RS05390 (EQH44_05710) | 1075532..1081669 | + | 6138 | WP_000417168.1 | Immunoglobulin A1 protease | VF |
| EQH44_RS05395 (EQH44_05720) | 1082116..1082967 | + | 852 | WP_000201301.1 | Ribosome biogenesis GTPase A | VF |
| EQH44_RS05400 (EQH44_05725) | 1082954..1083733 | + | 780 | WP_000201132.1 | ribonuclease HII | - |
| EQH44_RS05405 (EQH44_05730) | 1083749..1085299 | + | 1551 | WP_000392544.1 | ClC family H(+)/Cl(-) exchange transporter | - |
| EQH44_RS05410 (EQH44_05735) | 1085825..1086895 | + | 1071 | WP_000817882.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| EQH44_RS05415 (EQH44_05740) | 1086968..1087957 | - | 990 | WP_000873985.1 | Lipoate-protein ligase LplJ | VF |
| EQH44_RS05420 (EQH44_05745) | 1088021..1089724 | - | 1704 | WP_001162921.1 | dihydrolipoyl dehydrogenase | - |
| EQH44_RS05425 (EQH44_05750) | 1089770..1090813 | - | 1044 | WP_000752700.1 | dihydrolipoamide acetyltransferase | - |
| EQH44_RS05430 (EQH44_05755) | 1091031..1092023 | - | 993 | WP_000448726.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| EQH44_RS05435 (EQH44_05760) | 1092039..1093007 | - | 969 | WP_000105360.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| EQH44_RS05440 (EQH44_05765) | 1093161..1094522 | - | 1362 | WP_000278524.1 | sodium-coupled multidrug efflux MATE transporter PdrM | - |
| EQH44_RS05445 (EQH44_05770) | 1094533..1094793 | - | 261 | WP_001105925.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|