MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57300 bp
Accession: NZ_CP035108 Location: 969383..1026682 Organism: Geovibrio thiophilus strain DSM 11263 Replicon: chromosome
Accession: NZ_CP035108 Location: 969383..1026682 Organism: Geovibrio thiophilus strain DSM 11263 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EP073_RS04480 () | 964660..965616 | - | 957 | WP_128465977.1 | SEC-C domain-containing protein | - |
| EP073_RS04485 () | 965726..966840 | - | 1115 | Protein_885 | IS3 family transposase | - |
| EP073_RS04490 () | 966864..968093 | - | 1230 | WP_128465978.1 | NERD domain-containing protein | - |
| EP073_RS04495 () | 968173..968559 | - | 387 | WP_128465979.1 | hypothetical protein | - |
| EP073_RS04500 () | 969295..969930 | - | 636 | WP_128465980.1 | hypothetical protein | - |
| EP073_RS04505 () | 969944..970903 | - | 960 | WP_128465981.1 | hypothetical protein | - |
| EP073_RS04510 () | 970894..971094 | - | 201 | WP_128465982.1 | hypothetical protein | - |
| EP073_RS04515 () | 971105..971326 | - | 222 | WP_128465983.1 | hypothetical protein | - |
| EP073_RS04520 () | 971554..973539 | + | 1986 | WP_128465984.1 | AAA family ATPase | - |
| EP073_RS04525 () | 973524..975473 | + | 1950 | WP_128465985.1 | ATP-dependent helicase | - |
| EP073_RS04530 () | 975524..975994 | + | 471 | WP_128465986.1 | hypothetical protein | - |
| EP073_RS04535 () | 976141..976386 | + | 246 | WP_128465987.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EP073_RS04540 () | 976386..977699 | + | 1314 | WP_128465988.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| EP073_RS13880 () | 978602..978781 | + | 180 | WP_206617524.1 | SEC-C domain-containing protein | - |
| EP073_RS04550 () | 978957..979202 | + | 246 | WP_128465989.1 | helix-turn-helix domain-containing protein | - |
| EP073_RS04555 () | 979346..980464 | + | 1119 | WP_164885273.1 | HipA domain-containing protein | - |
| EP073_RS04565 () | 980822..982006 | - | 1185 | WP_128465991.1 | HipA domain-containing protein | - |
| EP073_RS04570 () | 982008..982220 | - | 213 | WP_128465992.1 | helix-turn-helix transcriptional regulator | - |
| EP073_RS13820 () | 982341..982514 | - | 174 | WP_164885274.1 | hypothetical protein | - |
| EP073_RS04575 () | 982636..982848 | - | 213 | WP_128465993.1 | hypothetical protein | - |
| EP073_RS04580 () | 982897..983976 | - | 1080 | WP_164885275.1 | site-specific integrase | - |
| EP073_RS04585 () | 983976..984680 | - | 705 | WP_128465995.1 | hypothetical protein | - |
| EP073_RS04590 () | 984953..985294 | + | 342 | Protein_906 | transposase | - |
| EP073_RS13885 () | 985310..985651 | - | 342 | WP_206617496.1 | hypothetical protein | - |
| EP073_RS04595 () | 985664..986386 | - | 723 | WP_206617497.1 | hypothetical protein | - |
| EP073_RS04605 () | 987084..987611 | - | 528 | WP_128465996.1 | NAD(P)H-dependent oxidoreductase | - |
| EP073_RS04610 () | 987652..988071 | - | 420 | WP_128465997.1 | MarR family transcriptional regulator | - |
| EP073_RS04615 () | 988267..988713 | - | 447 | WP_128465998.1 | SsrA-binding protein SmpB | - |
| EP073_RS04620 () | 988846..991590 | + | 2745 | WP_128465999.1 | EAL domain-containing protein | - |
| EP073_RS04625 () | 991697..992122 | + | 426 | WP_128466000.1 | hemerythrin family protein | - |
| EP073_RS04630 () | 992176..992427 | - | 252 | WP_128466001.1 | zinc ribbon domain-containing protein | - |
| EP073_RS04635 () | 992591..994564 | + | 1974 | WP_128466002.1 | excinuclease ABC subunit UvrB | - |
| EP073_RS04640 () | 994561..996852 | + | 2292 | WP_128466003.1 | PBP1A family penicillin-binding protein | - |
| EP073_RS04645 () | 996852..997823 | + | 972 | WP_128466004.1 | HAMP domain-containing histidine kinase | - |
| EP073_RS04650 () | 997820..1000420 | - | 2601 | WP_128466005.1 | chemotaxis protein CheW | - |
| EP073_RS04655 () | 1000592..1001671 | - | 1080 | WP_128466006.1 | putative zinc-binding metallopeptidase | - |
| EP073_RS04660 () | 1001668..1002606 | - | 939 | WP_164885276.1 | alpha-E domain-containing protein | - |
| EP073_RS04665 () | 1002608..1004056 | - | 1449 | WP_128466008.1 | circularly permuted type 2 ATP-grasp protein | - |
| EP073_RS04670 () | 1004710..1005252 | + | 543 | WP_206617498.1 | NAD(P)H-dependent oxidoreductase | - |
| EP073_RS04675 () | 1005478..1006080 | - | 603 | WP_206617499.1 | redoxin domain-containing protein | - |
| EP073_RS04680 () | 1006168..1006623 | - | 456 | WP_128466011.1 | PilZ domain-containing protein | - |
| EP073_RS04685 () | 1006835..1008265 | + | 1431 | WP_128466012.1 | nitronate monooxygenase | - |
| EP073_RS04690 () | 1008458..1010410 | + | 1953 | WP_128466013.1 | methyl-accepting chemotaxis protein | - |
| EP073_RS04695 () | 1011147..1012376 | + | 1230 | WP_128466014.1 | uracil-xanthine permease family protein | - |
| EP073_RS04700 () | 1012376..1013014 | + | 639 | WP_128466015.1 | uracil phosphoribosyltransferase | - |
| EP073_RS04705 () | 1013023..1013556 | + | 534 | WP_128466016.1 | NAD(P)H-dependent oxidoreductase | - |
| EP073_RS04710 () | 1013571..1013870 | - | 300 | WP_128466017.1 | PadR family transcriptional regulator | - |
| EP073_RS04715 () | 1013956..1015134 | + | 1179 | WP_128466018.1 | chromate efflux transporter | - |
| EP073_RS04720 () | 1015135..1016337 | - | 1203 | WP_128466019.1 | type II secretion system F family protein | - |
| EP073_RS04725 () | 1016334..1017989 | - | 1656 | WP_128466020.1 | type II/IV secretion system protein | - |
| EP073_RS04730 () | 1018130..1019839 | + | 1710 | WP_128466021.1 | proline--tRNA ligase | - |
| EP073_RS04735 () | 1019921..1020859 | + | 939 | WP_128466022.1 | M23 family metallopeptidase | - |
| EP073_RS04740 () | 1021195..1021554 | - | 360 | WP_128466023.1 | hypothetical protein | - |
| EP073_RS04745 () | 1021647..1022942 | - | 1296 | WP_128466024.1 | HAMP domain-containing histidine kinase | - |
| EP073_RS04750 () | 1022935..1023639 | - | 705 | WP_128466025.1 | response regulator transcription factor | - |
| EP073_RS04755 () | 1023868..1025355 | - | 1488 | WP_128466026.1 | NADPH-dependent glutamate synthase | - |
| EP073_RS04760 () | 1025360..1026208 | - | 849 | WP_128466027.1 | sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein | - |
| EP073_RS13890 () | 1026606..1026767 | + | 162 | WP_206617500.1 | hypothetical protein | - |
| EP073_RS04770 () | 1026764..1027333 | + | 570 | WP_128466028.1 | hypothetical protein | - |
| EP073_RS04775 () | 1027333..1028904 | + | 1572 | WP_128466029.1 | site-specific DNA-methyltransferase | - |
| EP073_RS04780 () | 1028904..1031582 | + | 2679 | WP_128466030.1 | DEAD/DEAH box helicase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|