MGE detailed information
MGE type: Conjugative plasmid MGE length: 87704 bp
Accession: NZ_CP034964 Location: 1..87704 Organism: Escherichia coli strain WCHEC020032 Replicon: plasmid pCTXM3_020032
Accession: NZ_CP034964 Location: 1..87704 Organism: Escherichia coli strain WCHEC020032 Replicon: plasmid pCTXM3_020032
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7V17_RS24850 () | 1..858 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| C7V17_RS00870 () | 1799..2452 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| C7V17_RS00875 () | 2545..2802 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| C7V17_RS00880 () | 2735..3136 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| C7V17_RS00885 () | 3385..3800 | + | 416 | Protein_5 | IS1 family transposase IS1R | Transposase |
| C7V17_RS00890 () | 3836..4381 | - | 546 | Protein_6 | Tn3 family transposase TnpA_Tn3 | Transposase |
| C7V17_RS00895 () | 4447..5151 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C7V17_RS00900 () | 5286..5381 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| C7V17_RS00905 () | 5507..6244 | + | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| C7V17_RS24855 () | 6189..6359 | + | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| C7V17_RS00915 () | 6874..7323 | + | 450 | WP_013362817.1 | hypothetical protein | - |
| C7V17_RS24860 () | 7284..7625 | + | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| C7V17_RS00925 () | 7852..9384 | + | 1533 | WP_013362816.1 | IS91 family transposase ISVsa3 | Transposase |
| C7V17_RS24865 () | 9707..9823 | - | 117 | Protein_14 | IS6 family transposase | - |
| C7V17_RS00940 () | 9881..10585 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| C7V17_RS00945 () | 10634..11539 | - | 906 | Protein_16 | IS4 family transposase IS10R | Transposase |
| C7V17_RS00955 () | 11682..12542 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| C7V17_RS00960 () | 12555..13097 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| C7V17_RS00965 () | 13579..13770 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| C7V17_RS00970 () | 13794..14021 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| C7V17_RS00975 () | 14072..15199 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| C7V17_RS00980 () | 15236..15940 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C7V17_RS00990 () | 16062..16967 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| C7V17_RS00995 () | 16964..18202 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| C7V17_RS01000 () | 18202..18786 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| C7V17_RS01015 () | 19279..20043 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| C7V17_RS24695 () | 20161..20226 | - | 66 | Protein_27 | EAL domain-containing protein | - |
| C7V17_RS01025 () | 20270..20575 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| C7V17_RS01030 () | 20586..21791 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| C7V17_RS01035 () | 21947..22150 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| C7V17_RS01045 () | 22278..23117 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| C7V17_RS01050 () | 23111..23458 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| C7V17_RS01055 () | 23664..24452 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| C7V17_RS01060 () | 24583..25056 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| C7V17_RS01065 () | 25214..25894 | + | 681 | Protein_35 | IS91 family transposase ISAzo26 | Transposase |
| C7V17_RS01070 () | 25959..26663 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| C7V17_RS01075 () | 26713..27456 | + | 744 | Protein_37 | Beta-lactamase TEM | ARG |
| C7V17_RS01080 () | 27715..28191 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| C7V17_RS01085 () | 28238..29113 | - | 876 | WP_011091028.1 | Beta-lactamase CTX-M-1 | ARG |
| C7V17_RS01090 () | 29535..30239 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| C7V17_RS24870 () | 30305..30370 | + | 66 | Protein_41 | IS1 family transposase | - |
| C7V17_RS01110 () | 31819..32053 | + | 235 | Protein_42 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C7V17_RS01115 () | 32181..32462 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| C7V17_RS01120 () | 32585..32935 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| C7V17_RS01125 () | 32938..33900 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| C7V17_RS01130 () | 34047..34340 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| C7V17_RS01140 () | 34417..35100 | + | 684 | WP_000085883.1 | DNA methylase | - |
| C7V17_RS01145 () | 35101..35322 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| C7V17_RS01150 () | 35336..35770 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| C7V17_RS24875 () | 35821..36597 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| C7V17_RS01165 () | 37138..37440 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| C7V17_RS01170 () | 37487..37909 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| C7V17_RS01175 () | 37906..38097 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| C7V17_RS01185 () | 39135..39365 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C7V17_RS01190 () | 39417..40778 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| C7V17_RS01195 () | 40825..41388 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| C7V17_RS01220 () | 42243..42770 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| C7V17_RS01225 () | 42828..43061 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| C7V17_RS01230 () | 43122..45145 | + | 2024 | Protein_59 | ParB/RepB/Spo0J family partition protein | - |
| C7V17_RS01235 () | 45214..45648 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| C7V17_RS01240 () | 45645..46364 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 46376..46600 | + | 225 | NuclAT_0 | - | - |
| - () | 46376..46600 | + | 225 | NuclAT_0 | - | - |
| - () | 46376..46600 | + | 225 | NuclAT_0 | - | - |
| - () | 46376..46600 | + | 225 | NuclAT_0 | - | - |
| C7V17_RS24700 () | 46385..46564 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 46533..46598 | + | 66 | - | - | Antitoxin Detail |
| C7V17_RS01245 () | 46644..46802 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C7V17_RS24880 () | 47040..47417 | - | 378 | Protein_64 | hypothetical protein | - |
| C7V17_RS01265 () | 47717..48013 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| C7V17_RS01270 () | 48124..48945 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| C7V17_RS01275 () | 49242..49844 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| C7V17_RS01285 () | 50167..50550 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| C7V17_RS01290 () | 50744..51415 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| C7V17_RS01295 () | 51552..51779 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| C7V17_RS01300 () | 51812..52171 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| C7V17_RS01305 () | 52186..52497 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| C7V17_RS01310 () | 52519..53085 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| C7V17_RS01315 () | 53072..53800 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| C7V17_RS01320 () | 53800..55251 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| C7V17_RS01325 () | 55220..55807 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| C7V17_RS01330 () | 55746..56114 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| C7V17_RS01335 () | 56111..56626 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C7V17_RS01340 () | 56761..56982 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| C7V17_RS01345 () | 56975..57451 | + | 477 | WP_000549587.1 | hypothetical protein | - |
| C7V17_RS01350 () | 57531..57749 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| C7V17_RS01355 () | 57777..58124 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| C7V17_RS01360 () | 58250..60880 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| C7V17_RS01365 () | 60877..61263 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| C7V17_RS01370 () | 61260..61892 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| C7V17_RS01375 () | 61889..62881 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| C7V17_RS01380 () | 62911..63216 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| C7V17_RS01385 () | 63225..63863 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C7V17_RS01390 () | 63860..65710 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C7V17_RS01395 () | 65737..65994 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| C7V17_RS01400 () | 65987..66730 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C7V17_RS01405 () | 66744..67088 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| C7V17_RS01410 () | 67207..67491 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C7V17_RS01415 () | 67478..68023 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C7V17_RS01420 () | 67953..68300 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| C7V17_RS01425 () | 68248..68673 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| C7V17_RS01430 () | 68660..70033 | + | 1374 | WP_128684124.1 | conjugal transfer protein TraH | - |
| C7V17_RS01435 () | 70030..72852 | + | 2823 | WP_063610840.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C7V17_RS01440 () | 72868..73353 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| C7V17_RS01445 () | 73402..74133 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| C7V17_RS01450 () | 74336..75073 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| C7V17_RS01455 () | 75124..77358 | + | 2235 | WP_000009330.1 | type IV conjugative transfer system coupling protein TraD | - |
| C7V17_RS01460 () | 77358..82628 | + | 5271 | WP_087503768.1 | Multifunctional conjugation protein TraI | Relaxase |
| C7V17_RS01465 () | 82648..83394 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| C7V17_RS01470 () | 83453..84313 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| C7V17_RS01475 () | 84416..84976 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| C7V17_RS01480 () | 85105..85317 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| C7V17_RS01485 () | 85562..86023 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| C7V17_RS01490 () | 86069..86278 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| C7V17_RS01495 () | 86316..86906 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| C7V17_RS01500 () | 87146..87400 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|