MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 102326 bp
Accession: NZ_CP034939 Location: 1..102326 Organism: Pectobacterium odoriferum strain JK2.1 Replicon: plasmid p.Jk2_1
Accession: NZ_CP034939 Location: 1..102326 Organism: Pectobacterium odoriferum strain JK2.1 Replicon: plasmid p.Jk2_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO763_RS22630 () | 328..741 | - | 414 | WP_161530468.1 | DUF1380 family protein | - |
| EO763_RS22635 () | 790..1011 | - | 222 | WP_039310657.1 | hypothetical protein | - |
| EO763_RS22640 () | 1011..1690 | - | 680 | Protein_3 | DNA methylase | - |
| EO763_RS22645 () | 2263..2481 | - | 219 | WP_039310789.1 | hypothetical protein | - |
| EO763_RS22650 () | 2493..2861 | - | 369 | WP_161530469.1 | hypothetical protein | - |
| EO763_RS22655 () | 2897..3778 | + | 882 | WP_161530470.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| EO763_RS22660 () | 4058..4492 | - | 435 | WP_161530471.1 | hypothetical protein | - |
| EO763_RS22665 () | 4939..5265 | - | 327 | WP_161530562.1 | plasmid stability protein | - |
| EO763_RS22670 () | 5340..6314 | - | 975 | WP_161530472.1 | StbA family protein | - |
| EO763_RS22675 () | 6551..6877 | - | 327 | WP_161530473.1 | hypothetical protein | - |
| EO763_RS22680 () | 6883..7512 | - | 630 | WP_161530563.1 | ParA family protein | - |
| EO763_RS22685 () | 9070..9786 | + | 717 | WP_161530474.1 | replication initiation protein | - |
| EO763_RS22690 () | 9834..11180 | + | 1347 | WP_161530475.1 | hypothetical protein | - |
| EO763_RS22695 () | 11213..11836 | - | 624 | WP_161530476.1 | hypothetical protein | - |
| EO763_RS22700 () | 12144..12428 | + | 285 | WP_161530564.1 | helix-turn-helix transcriptional regulator | - |
| EO763_RS22705 () | 12542..13327 | - | 786 | WP_167521870.1 | site-specific integrase | - |
| EO763_RS22710 () | 13324..13659 | - | 336 | WP_161530477.1 | hypothetical protein | - |
| EO763_RS22715 () | 14001..14201 | - | 201 | Protein_18 | type II toxin-antitoxin system HicB family antitoxin | - |
| EO763_RS22720 () | 14340..14645 | - | 306 | WP_161530478.1 | hypothetical protein | - |
| EO763_RS22725 () | 15228..15458 | + | 231 | WP_111778951.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| EO763_RS22730 () | 15455..15871 | + | 417 | WP_111778950.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| EO763_RS22735 () | 15913..16791 | - | 879 | WP_111778949.1 | restriction endonuclease | - |
| EO763_RS23345 () | 17014..17232 | + | 219 | WP_167521869.1 | hypothetical protein | - |
| EO763_RS22740 () | 17229..17849 | + | 621 | WP_161530479.1 | DNA-binding protein | - |
| EO763_RS22745 () | 17846..18358 | + | 513 | WP_161530480.1 | hypothetical protein | - |
| EO763_RS22750 () | 18372..18647 | + | 276 | WP_161530481.1 | hypothetical protein | - |
| EO763_RS22755 () | 18649..18945 | + | 297 | WP_161530482.1 | hypothetical protein | - |
| EO763_RS22760 () | 19060..19821 | + | 762 | WP_161530483.1 | 34 kDa antigenic family protein | - |
| EO763_RS22765 () | 19858..20103 | + | 246 | WP_161530484.1 | hypothetical protein | - |
| EO763_RS22770 () | 20215..20394 | - | 180 | WP_161530485.1 | hypothetical protein | - |
| EO763_RS22775 () | 20488..21090 | - | 603 | WP_161530486.1 | hypothetical protein | - |
| EO763_RS22780 () | 21145..21957 | - | 813 | WP_161530487.1 | hypothetical protein | - |
| EO763_RS22785 () | 22222..22911 | + | 690 | WP_161530488.1 | helix-turn-helix domain-containing protein | - |
| EO763_RS22790 () | 22942..23631 | - | 690 | WP_161530489.1 | RES family NAD+ phosphorylase | - |
| EO763_RS22795 () | 23991..24383 | + | 393 | WP_161530490.1 | hypothetical protein | - |
| EO763_RS22800 () | 24373..24987 | + | 615 | WP_161530491.1 | hypothetical protein | - |
| EO763_RS23445 () | 25443..25874 | + | 432 | WP_161530566.1 | tgtA5 cluster protein 2 | - |
| EO763_RS22810 () | 26342..26617 | + | 276 | WP_161530492.1 | hypothetical protein | - |
| EO763_RS22815 () | 26781..27254 | - | 474 | WP_161530493.1 | hypothetical protein | - |
| EO763_RS22820 () | 27370..27846 | - | 477 | WP_161530494.1 | hypothetical protein | - |
| EO763_RS22825 () | 28517..29263 | + | 747 | WP_161530495.1 | conjugal transfer protein TraX | - |
| EO763_RS22830 () | 30066..30875 | - | 810 | WP_161530567.1 | RepA | - |
| EO763_RS22835 () | 32265..32555 | - | 291 | WP_161530496.1 | hypothetical protein | - |
| EO763_RS22840 () | 33444..33650 | + | 207 | WP_161530497.1 | hypothetical protein | - |
| EO763_RS22845 () | 33720..34298 | - | 579 | WP_161530498.1 | hypothetical protein | - |
| EO763_RS22850 () | 35060..35839 | - | 780 | WP_161530499.1 | DsbA family protein | - |
| EO763_RS22855 () | 35858..41470 | - | 5613 | WP_161530500.1 | Multifunctional conjugation protein TraI | Relaxase |
| EO763_RS22860 () | 41467..43962 | - | 2496 | WP_161530501.1 | type IV conjugative transfer system coupling protein TraD | - |
| EO763_RS22865 () | 44559..45890 | - | 1332 | WP_161530568.1 | YadA-like family protein | - |
| EO763_RS22870 () | 46806..47465 | - | 660 | WP_161530502.1 | hypothetical protein | - |
| EO763_RS22875 () | 47474..51072 | - | 3599 | Protein_51 | conjugal transfer mating pair stabilization protein TraG | - |
| EO763_RS22880 () | 51172..52536 | - | 1365 | WP_161530503.1 | conjugal transfer protein TraH | - |
| EO763_RS22885 () | 52634..53245 | - | 612 | WP_161530569.1 | F-type conjugal transfer protein TrbB | - |
| EO763_RS22890 () | 53232..53450 | - | 219 | WP_161530504.1 | hypothetical protein | - |
| EO763_RS22895 () | 53447..53860 | - | 414 | WP_161530505.1 | hypothetical protein | - |
| EO763_RS22900 () | 53872..54663 | - | 792 | WP_161530506.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EO763_RS22905 () | 54660..56501 | - | 1842 | WP_161530507.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EO763_RS22910 () | 56498..57118 | - | 621 | WP_161530508.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EO763_RS22915 () | 57127..58125 | - | 999 | WP_161530509.1 | conjugal transfer pilus assembly protein TraU | - |
| EO763_RS22920 () | 58598..59170 | - | 573 | WP_161530510.1 | hypothetical protein | - |
| EO763_RS22925 () | 59173..59451 | - | 279 | WP_161530511.1 | hypothetical protein | - |
| EO763_RS22930 () | 59444..60082 | - | 639 | WP_161530512.1 | type-F conjugative transfer system protein TraW | - |
| EO763_RS22935 () | 60079..60486 | - | 408 | WP_161530513.1 | type-F conjugative transfer system protein TrbI | - |
| EO763_RS22940 () | 60483..63077 | - | 2595 | WP_161530514.1 | type IV secretion system protein TraC | - |
| EO763_RS22945 () | 63209..63385 | - | 177 | WP_161530515.1 | hypothetical protein | - |
| EO763_RS22950 () | 63594..64157 | - | 564 | WP_161530516.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EO763_RS22955 () | 64304..64744 | - | 441 | WP_161530517.1 | hypothetical protein | - |
| EO763_RS22960 () | 64756..66156 | - | 1401 | WP_161530518.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| EO763_RS22965 () | 66156..66890 | - | 735 | WP_161530519.1 | type-F conjugative transfer system secretin TraK | - |
| EO763_RS22970 () | 66903..67484 | - | 582 | WP_161530570.1 | conjugal transfer protein TraE | - |
| EO763_RS22975 () | 67490..67792 | - | 303 | WP_161530520.1 | type IV conjugative transfer system protein TraL | - |
| EO763_RS22980 () | 67795..68148 | - | 354 | WP_161530521.1 | conjugal transfer protein TraA | - |
| EO763_RS22985 () | 68350..68988 | + | 639 | WP_161530522.1 | Arc family DNA-binding protein | - |
| EO763_RS22990 () | 69025..69414 | - | 390 | WP_161530523.1 | conjugal transfer protein | - |
| EO763_RS22995 () | 70098..70514 | + | 417 | WP_161530571.1 | hypothetical protein | VF |
| EO763_RS23000 () | 70569..70832 | - | 264 | WP_161530524.1 | hypothetical protein | - |
| EO763_RS23005 () | 70929..71297 | - | 369 | WP_161530525.1 | hypothetical protein | - |
| EO763_RS23010 () | 72051..72353 | - | 303 | WP_161530526.1 | hypothetical protein | - |
| EO763_RS23015 () | 72712..73170 | - | 459 | WP_161530527.1 | helix-turn-helix domain-containing protein | - |
| EO763_RS23020 () | 73167..74225 | - | 1059 | WP_161530528.1 | hypothetical protein | - |
| EO763_RS23025 () | 74212..74637 | - | 426 | WP_161530529.1 | hypothetical protein | - |
| EO763_RS23030 () | 74634..75239 | - | 606 | WP_161530530.1 | VWA domain-containing protein | - |
| EO763_RS23035 () | 75249..75863 | - | 615 | WP_161530531.1 | hypothetical protein | - |
| EO763_RS23040 () | 75877..76215 | - | 339 | WP_161530532.1 | hypothetical protein | - |
| EO763_RS23045 () | 76212..76742 | - | 531 | WP_161530533.1 | hypothetical protein | - |
| EO763_RS23050 () | 76867..77286 | - | 420 | WP_161530534.1 | hypothetical protein | - |
| EO763_RS23055 () | 77302..78390 | - | 1089 | WP_161530572.1 | phosphohydrolase | - |
| EO763_RS23060 () | 78390..78905 | - | 516 | WP_161530535.1 | replication protein B | - |
| EO763_RS23065 () | 78907..79494 | - | 588 | WP_161530536.1 | hypothetical protein | - |
| EO763_RS23070 () | 80003..80965 | - | 963 | WP_161530537.1 | hypothetical protein | - |
| EO763_RS23075 () | 81692..82588 | - | 897 | WP_161530538.1 | DUF4942 domain-containing protein | - |
| EO763_RS23080 () | 83236..83739 | - | 504 | WP_161530539.1 | antirestriction protein ArdA | - |
| EO763_RS23085 () | 84312..84707 | - | 396 | WP_039311102.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| EO763_RS23090 () | 84709..85005 | - | 297 | WP_161530540.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| EO763_RS23095 () | 85010..85237 | - | 228 | WP_161530541.1 | hypothetical protein | - |
| EO763_RS23100 () | 85336..86517 | - | 1182 | WP_161530542.1 | hypothetical protein | - |
| EO763_RS23105 () | 86535..86864 | - | 330 | WP_161530543.1 | hypothetical protein | - |
| EO763_RS23110 () | 87367..87762 | + | 396 | WP_161530544.1 | hypothetical protein | - |
| EO763_RS23115 () | 87809..88183 | - | 375 | WP_161530545.1 | hypothetical protein | - |
| EO763_RS23120 () | 88197..88997 | - | 801 | WP_161530546.1 | hypothetical protein | - |
| EO763_RS23125 () | 89003..89284 | - | 282 | WP_039311124.1 | hypothetical protein | - |
| EO763_RS23130 () | 89294..89479 | - | 186 | WP_161530547.1 | hypothetical protein | - |
| EO763_RS23135 () | 89472..90209 | - | 738 | WP_161530548.1 | plasmid SOS inhibition protein A | - |
| EO763_RS23140 () | 90206..90649 | - | 444 | WP_111778896.1 | hypothetical protein | - |
| EO763_RS23145 () | 90686..92770 | - | 2085 | WP_161530549.1 | ParB/RepB/Spo0J family partition protein | - |
| EO763_RS23150 () | 92846..93205 | - | 360 | WP_111778898.1 | hypothetical protein | - |
| EO763_RS23155 () | 94216..94473 | + | 258 | WP_127088040.1 | hypothetical protein | - |
| EO763_RS23160 () | 94497..95192 | + | 696 | WP_161530550.1 | hypothetical protein | - |
| EO763_RS23165 () | 95235..95438 | + | 204 | WP_161530551.1 | hemolysin expression modulator Hha | - |
| EO763_RS23170 () | 95601..96386 | - | 786 | WP_161530552.1 | N-6 DNA methylase | - |
| EO763_RS23175 () | 97000..97149 | + | 150 | WP_161530553.1 | hypothetical protein | - |
| EO763_RS23180 () | 97519..97659 | + | 141 | WP_161530554.1 | hypothetical protein | - |
| EO763_RS23185 () | 98029..98169 | + | 141 | WP_161530554.1 | hypothetical protein | - |
| EO763_RS23190 () | 98297..98473 | - | 177 | WP_161530555.1 | hypothetical protein | - |
| EO763_RS23195 () | 98463..98897 | - | 435 | WP_161530556.1 | DUF1380 family protein | - |
| EO763_RS23200 () | 98935..99312 | - | 378 | WP_161530557.1 | DUF1380 family protein | - |
| EO763_RS23205 () | 99354..99782 | - | 429 | WP_161530558.1 | antirestriction protein | - |
| EO763_RS23210 () | 100260..100595 | - | 336 | WP_161530559.1 | hypothetical protein | - |
| EO763_RS23215 () | 100607..101395 | - | 789 | WP_161530560.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|