MGE detailed information
MGE type: IScluster/Tn MGE length: 11254 bp
Accession: NZ_CP034935 Location: 4557048..4568301 Organism: Shigella dysenteriae strain 79-8006 Replicon: chromosome
Accession: NZ_CP034935 Location: 4557048..4568301 Organism: Shigella dysenteriae strain 79-8006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPD85_RS23990 () | 4555407..4556204 | - | 798 | WP_001302302.1 | DgsA anti-repressor MtfA | - |
| EPD85_RS24000 () | 4556415..4557007 | - | 593 | Protein_4566 | tyrosine-type recombinase/integrase | - |
| EPD85_RS24005 () | 4557048..4557976 | - | 929 | Protein_4567 | IS3 family transposase IS600 | Transposase |
| EPD85_RS24015 () | 4558745..4558981 | - | 237 | Protein_4569 | IS3 family transposase ISSd1 | Transposase |
| EPD85_RS24020 () | 4558997..4559266 | + | 270 | WP_001117462.1 | helix-turn-helix domain-containing protein | - |
| EPD85_RS24025 () | 4559263..4559688 | + | 426 | WP_000693856.1 | toxin YdaT family protein | - |
| EPD85_RS24030 () | 4559760..4560830 | + | 1071 | WP_024259707.1 | hypothetical protein | - |
| EPD85_RS24035 () | 4560871..4561293 | + | 423 | WP_001151146.1 | DUF977 family protein | - |
| EPD85_RS24040 () | 4561290..4561595 | + | 306 | WP_001266147.1 | DUF4406 domain-containing protein | - |
| EPD85_RS24045 () | 4561582..4562037 | + | 456 | WP_000335375.1 | ead/Ea22-like family protein | - |
| EPD85_RS24050 () | 4562087..4563625 | - | 1539 | WP_000099181.1 | IS66 family transposase ISEc22 | Transposase |
| EPD85_RS24055 () | 4563674..4564021 | - | 348 | WP_000612610.1 | IS66 family transposase ISKpn24 | Transposase |
| EPD85_RS24060 () | 4564018..4564398 | - | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| EPD85_RS24065 () | 4564510..4564926 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 4565508..4565566 | - | 59 | - | - | Antitoxin Detail |
| EPD85_RS24075 () | 4565578..4565733 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| EPD85_RS24080 () | 4565901..4566179 | + | 279 | WP_000929754.1 | hypothetical protein | - |
| EPD85_RS24085 () | 4566181..4566930 | + | 750 | Protein_4582 | hypothetical protein | - |
| EPD85_RS24090 () | 4566980..4567908 | - | 929 | Protein_4583 | IS3 family transposase IS600 | Transposase |
| EPD85_RS25450 () | 4568677..4568745 | + | 69 | Protein_4585 | phage tail protein | - |
| EPD85_RS24100 () | 4568748..4569293 | + | 546 | WP_000902849.1 | tail fiber assembly protein | - |
| EPD85_RS24105 () | 4569317..4570585 | + | 1269 | Protein_4587 | prophage tail fiber N-terminal domain-containing protein | - |
| EPD85_RS24110 () | 4570536..4571159 | + | 624 | WP_000551126.1 | DUF4376 domain-containing protein | - |
| EPD85_RS24115 () | 4571339..4572982 | - | 1644 | WP_046891740.1 | NEL-type E3 ubiquitin ligase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|