MGE detailed information
MGE type: IScluster/Tn MGE length: 5903 bp
Accession: NZ_CP034935 Location: 2954123..2960025 Organism: Shigella dysenteriae strain 79-8006 Replicon: chromosome
Accession: NZ_CP034935 Location: 2954123..2960025 Organism: Shigella dysenteriae strain 79-8006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPD85_RS15865 () | 2951121..2951708 | + | 588 | WP_000747616.1 | OmpA family lipoprotein | - |
| EPD85_RS15870 () | 2951812..2952786 | + | 975 | WP_000805034.1 | glyoxylate/hydroxypyruvate reductase GhrB | - |
| EPD85_RS15875 () | 2952836..2953546 | - | 711 | WP_004987320.1 | DUF3053 domain-containing protein | - |
| EPD85_RS15880 () | 2953803..2954500 | + | 698 | WP_134795416.1 | IS1 family transposase IS1R | Transposase |
| EPD85_RS15885 () | 2954755..2955045 | + | 291 | WP_005045913.1 | HTH-type transcriptional regulator | - |
| EPD85_RS15890 () | 2955326..2955538 | + | 213 | WP_000014594.1 | RNA chaperone/antiterminator CspA | - |
| EPD85_RS25285 () | 2955669..2955728 | + | 60 | WP_212732943.1 | hypothetical protein | - |
| EPD85_RS15895 () | 2955717..2955869 | - | 153 | WP_001135724.1 | type I toxin-antitoxin system toxin HokA | Toxin Detail |
| - | 2955920..2955974 | + | 55 | - | - | Antitoxin Detail |
| EPD85_RS15900 () | 2956133..2956830 | + | 698 | WP_094106546.1 | IS1 family transposase IS1X2 | Transposase |
| EPD85_RS15905 () | 2957134..2958362 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| EPD85_RS15910 () | 2958376..2959518 | - | 1143 | Protein_2977 | IS4 family transposase IS4 | Transposase |
| EPD85_RS15915 () | 2959669..2960025 | + | 357 | WP_000239757.1 | IS66 family transposase IS682 | Transposase |
| EPD85_RS15920 () | 2960022..2960231 | + | 210 | Protein_2979 | IS66 family insertion sequence element accessory protein TnpB | - |
| EPD85_RS15925 () | 2960235..2960465 | + | 231 | Protein_2980 | IS4 family transposase | - |
| EPD85_RS15930 () | 2960539..2962188 | - | 1650 | WP_000934216.1 | alpha,alpha-trehalase | - |
| EPD85_RS15935 () | 2962592..2963989 | + | 1398 | WP_000784841.1 | cytochrome c peroxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|