MGE detailed information
MGE type: IScluster/Tn MGE length: 43361 bp
Accession: NZ_CP034933 Location: 23086..66446 Organism: Shigella flexneri strain 2013C-3749 Replicon: plasmid p2013C-3749-2
Accession: NZ_CP034933 Location: 23086..66446 Organism: Shigella flexneri strain 2013C-3749 Replicon: plasmid p2013C-3749-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPD86_RS24080 | 18625..18861 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| EPD86_RS24085 | 19078..20007 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| EPD86_RS24090 | 20954..21733 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| EPD86_RS26030 | 21930..22739 | - | 810 | Protein_25 | IS110 family transposase | - |
| EPD86_RS24095 | 23086..24090 | + | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| EPD86_RS24100 | 24282..25478 | + | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| EPD86_RS24105 | 25528..26365 | - | 838 | Protein_28 | IS21 family transposase ISEc62 | Transposase |
| EPD86_RS26035 | 26348..26689 | - | 342 | Protein_29 | IS21 family transposase ISEc62 | Transposase |
| EPD86_RS24110 | 26804..27607 | - | 804 | Protein_30 | IS3 family transposase ISKpn38 | Transposase |
| EPD86_RS24115 | 27648..28712 | - | 1065 | Protein_31 | IS3 family transposase IS600 | Transposase |
| EPD86_RS24120 | 29050..30504 | - | 1455 | WP_015683184.1 | hypothetical protein | VF |
| EPD86_RS24125 | 31076..31750 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS24130 | 31747..32097 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS24135 | 32094..33695 | + | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| EPD86_RS24140 | 33949..34113 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| EPD86_RS24145 | 35015..35299 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| EPD86_RS24150 | 35287..35772 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| EPD86_RS24155 | 35945..36226 | - | 282 | Protein_39 | IS4 family transposase ISSfl1 | Transposase |
| EPD86_RS24165 | 36293..37449 | + | 1157 | WP_094085527.1 | IS3 family transposase IS600 | Transposase |
| EPD86_RS24170 | 37519..38792 | + | 1274 | WP_094081497.1 | IS3 family transposase IS2 | Transposase |
| EPD86_RS24175 | 38830..38973 | + | 144 | Protein_42 | DUF3440 domain-containing protein | - |
| EPD86_RS24180 | 38958..39596 | + | 639 | WP_000502854.1 | ParB N-terminal domain-containing protein | - |
| EPD86_RS24185 | 39824..40248 | + | 425 | Protein_44 | hypothetical protein | - |
| EPD86_RS24190 | 40243..41439 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| EPD86_RS24200 | 43026..43499 | + | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| EPD86_RS24205 | 43588..44453 | + | 866 | WP_094085526.1 | IS5 family transposase ISSfl7 | Transposase |
| EPD86_RS24210 | 44703..44896 | + | 194 | Protein_49 | HNH endonuclease | - |
| EPD86_RS24215 | 45039..45260 | + | 222 | Protein_50 | IS66 family transposase ISCro1 | Transposase |
| EPD86_RS24220 | 45281..45343 | - | 63 | Protein_51 | IS66 family transposase ISCro1 | Transposase |
| EPD86_RS24225 | 45793..47205 | + | 1413 | WP_001026857.1 | hypothetical protein | VF |
| EPD86_RS24230 | 47309..47458 | - | 150 | Protein_53 | IS1 family transposase | - |
| EPD86_RS24235 | 47534..49231 | + | 1698 | WP_024259347.1 | hypothetical protein | VF |
| EPD86_RS24240 | 49348..49467 | + | 120 | Protein_55 | IS66 family insertion sequence element accessory protein TnpB | - |
| EPD86_RS24245 | 49634..49906 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| EPD86_RS24250 | 49887..51094 | + | 1208 | WP_094085525.1 | IS91 family transposase ISSbo1 | Transposase |
| EPD86_RS24255 | 51470..52204 | - | 735 | Protein_58 | IS21 family transposase IS100kyp | Transposase |
| EPD86_RS24260 | 52384..53592 | + | 1209 | Protein_59 | IS3 family transposase | - |
| EPD86_RS24265 | 53695..54192 | + | 498 | Protein_60 | IS66 family transposase ISEc47 | Transposase |
| EPD86_RS24270 | 54233..54424 | + | 192 | Protein_61 | IS21 family transposase IS100 | Transposase |
| EPD86_RS24275 | 54518..54727 | - | 210 | Protein_62 | peptidoglycan-binding protein | - |
| EPD86_RS24280 | 54777..56141 | - | 1365 | WP_000051931.1 | MFS transporter | - |
| EPD86_RS24285 | 56339..56614 | - | 276 | WP_227804373.1 | S-type pyocin domain-containing protein | - |
| EPD86_RS25505 | 56889..57101 | + | 213 | Protein_65 | DDE-type integrase/transposase/recombinase | - |
| EPD86_RS24295 | 57145..58353 | - | 1209 | Protein_66 | IS3 family transposase | - |
| EPD86_RS24300 | 58405..60129 | - | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| EPD86_RS24305 | 60557..62254 | - | 1698 | WP_064203851.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| EPD86_RS24310 | 62583..62762 | + | 180 | Protein_69 | transposase | - |
| EPD86_RS24315 | 62779..63469 | - | 691 | Protein_70 | IS1 family transposase | - |
| EPD86_RS24320 | 63663..64694 | - | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| EPD86_RS24335 | 67038..67226 | - | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|