MGE detailed information
MGE type: Prophage MGE length: 10392 bp
Accession: NZ_CP034931 Location: 1853925..1864316 Organism: Shigella flexneri strain 2013C-3749 Replicon: chromosome
Accession: NZ_CP034931 Location: 1853925..1864316 Organism: Shigella flexneri strain 2013C-3749 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EPD86_RS09425 (1850438) | 1850438..1851184 | + | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EPD86_RS09430 (1851273) | 1851273..1851959 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| EPD86_RS09435 (1852137) | 1852137..1852340 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EPD86_RS09440 (1852376) | 1852376..1853836 | - | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| EPD86_RS09445 (1853925) | 1853925..1854944 | - | 1020 | Protein_1834 | MHS family MFS transporter YdfJ | - |
| EPD86_RS09460 (1855006) | 1855006..1856162 | + | 1157 | Protein_1835 | IS3 family transposase IS600 | Transposase |
| EPD86_RS09465 (1856159) | 1856159..1856464 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| EPD86_RS09470 (1856489) | 1856489..1856728 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EPD86_RS09475 (1856728) | 1856728..1857015 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EPD86_RS09480 (1857087) | 1857087..1857242 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EPD86_RS09485 (1857460) | 1857460..1857711 | + | 252 | WP_000980987.1 | protein Rem | - |
| EPD86_RS09490 (1857778) | 1857778..1858056 | + | 279 | Protein_1841 | hypothetical protein | - |
| EPD86_RS09495 (1858058) | 1858058..1859107 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| EPD86_RS09500 (1859120) | 1859120..1859476 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EPD86_RS09505 (1859491) | 1859491..1860312 | + | 822 | WP_000762882.1 | antitermination protein | - |
| EPD86_RS09520 (1861233) | 1861233..1861341 | + | 109 | Protein_1845 | DUF3927 family protein | - |
| EPD86_RS09525 (1861622) | 1861622..1861957 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| EPD86_RS09530 (1862217) | 1862217..1862402 | + | 186 | Protein_1847 | DUF1737 domain-containing protein | - |
| EPD86_RS09535 (1862402) | 1862402..1862563 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| EPD86_RS09540 (1862713) | 1862713..1862892 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| EPD86_RS09545 (1862917) | 1862917..1863795 | - | 879 | Protein_1850 | IS3 family transposase IS600 | Transposase |
| EPD86_RS09555 (1864566) | 1864566..1865315 | + | 750 | Protein_1852 | fimbrial protein | - |
| EPD86_RS09560 (1865649) | 1865649..1867928 | + | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| EPD86_RS09565 (1868176) | 1868176..1868379 | + | 204 | WP_000543395.1 | two-component system connector SafA | - |
| EPD86_RS09570 (1868447) | 1868447..1869208 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|