MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 51516 bp
Accession: NZ_CP034922 Location: 1..51516 Organism: Roseomonas mucosa strain HV1 Replicon: plasmid p3-HV1
Accession: NZ_CP034922 Location: 1..51516 Organism: Roseomonas mucosa strain HV1 Replicon: plasmid p3-HV1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RMHFA_RS00005 (RMHFA_04794) | 2..697 | + | 696 | WP_099781159.1 | Protein virC1 | VF |
| RMHFA_RS00010 (RMHFA_04795) | 697..1122 | + | 426 | WP_126281793.1 | hypothetical protein | - |
| RMHFA_RS00015 (RMHFA_02066) | 1119..2168 | + | 1050 | WP_099781158.1 | replication initiator protein A | - |
| RMHFA_RS00025 (RMHFA_05625) | 4328..4501 | - | 174 | WP_193009569.1 | hypothetical protein | - |
| RMHFA_RS00030 (RMHFA_04957d) | 4663..6024 | + | 1362 | WP_099781156.1 | transposase | - |
| RMHFA_RS00035 (RMHFA_03809j) | 6378..7519 | + | 1142 | WP_099781154.1 | IS3 family transposase ISNisp1 | Transposase |
| RMHFA_RS00040 (RMHFA_03809k) | 7558..8534 | + | 977 | Protein_7 | IS3 family transposase ISStau1 | Transposase |
| RMHFA_RS00045 (RMHFA_04175) | 8672..9016 | + | 345 | WP_019463191.1 | IS5 family transposase ISMepa1 | Transposase |
| RMHFA_RS00050 (RMHFA_04174) | 9031..9588 | + | 558 | WP_226945917.1 | transposase | - |
| RMHFA_RS00055 (RMHFA_04487i) | 9606..9755 | - | 150 | Protein_10 | IS5/IS1182 family transposase | - |
| RMHFA_RS00060 (RMHFA_05100b) | 9854..10273 | + | 420 | WP_099781116.1 | IS66 family transposase ISNisp6 | Transposase |
| RMHFA_RS00065 (RMHFA_01930a) | 10270..10626 | + | 357 | WP_027281944.1 | IS66 family transposase ISBj7_B | Transposase |
| RMHFA_RS00070 (RMHFA_01929a) | 10640..12223 | + | 1584 | WP_099781115.1 | IS66 family transposase ISBj7_B | Transposase |
| RMHFA_RS00075 (RMHFA_05596) | 12262..12519 | - | 258 | Protein_14 | transposase | - |
| RMHFA_RS00080 | 12606..12815 | - | 210 | WP_099781151.1 | hypothetical protein | - |
| RMHFA_RS00085 | 13003..13828 | + | 826 | Protein_16 | IS5 family transposase ISMra2 | Transposase |
| RMHFA_RS00090 (RMHFA_05629) | 14016..16745 | - | 2730 | WP_099781149.1 | DEAD/DEAH box helicase family protein | - |
| RMHFA_RS00095 (RMHFA_05630) | 16742..18448 | - | 1707 | WP_099781148.1 | site-specific DNA-methyltransferase | - |
| RMHFA_RS00100 (RMHFA_05632) | 19523..22360 | - | 2838 | WP_099781147.1 | SNF2-related protein | - |
| RMHFA_RS00105 (RMHFA_03203) | 22585..22995 | - | 411 | WP_099781146.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RMHFA_RS00110 (RMHFA_03204) | 22992..23216 | - | 225 | WP_027283136.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| RMHFA_RS00115 (RMHFA_03205) | 23329..24447 | - | 1119 | WP_099781145.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| RMHFA_RS00120 (RMHFA_00086a) | 25011..26003 | - | 993 | WP_265838677.1 | DNA/RNA non-specific endonuclease | - |
| RMHFA_RS00125 (RMHFA_05561) | 26697..27818 | - | 1122 | WP_126281791.1 | hypothetical protein | - |
| RMHFA_RS00130 (RMHFA_05429) | 28427..31774 | + | 3348 | WP_099781143.1 | TM0106 family RecB-like putative nuclease | - |
| RMHFA_RS00135 | 31771..32730 | + | 960 | WP_126281790.1 | hypothetical protein | - |
| RMHFA_RS00140 (RMHFA_05251) | 32697..33527 | + | 831 | WP_226945916.1 | hypothetical protein | - |
| RMHFA_RS22470 (RMHFA_05252) | 33536..34276 | - | 741 | WP_276561141.1 | HNH endonuclease | - |
| RMHFA_RS00155 (RMHFA_05633) | 34294..35247 | - | 954 | WP_151904021.1 | hypothetical protein | - |
| RMHFA_RS00160 (RMHFA_05634) | 35391..35633 | + | 243 | WP_099781140.1 | hypothetical protein | - |
| RMHFA_RS00165 (RMHFA_01221a) | 35816..36826 | + | 1011 | WP_099781174.1 | hypothetical protein | - |
| RMHFA_RS00170 (RMHFA_05635) | 36867..37403 | - | 537 | WP_126281797.1 | hypothetical protein | - |
| RMHFA_RS00175 (RMHFA_05636) | 37400..37705 | - | 306 | WP_099781106.1 | hypothetical protein | - |
| RMHFA_RS00180 (RMHFA_05430a) | 37728..38279 | - | 552 | WP_099781105.1 | hypothetical protein | - |
| RMHFA_RS00185 (RMHFA_04721a) | 38526..38792 | + | 267 | WP_226945919.1 | helix-turn-helix transcriptional regulator | - |
| RMHFA_RS00190 (RMHFA_04722a) | 39573..40130 | + | 558 | WP_099781172.1 | hypothetical protein | - |
| RMHFA_RS00195 (RMHFA_02244b) | 40372..42123 | + | 1752 | WP_265838663.1 | DUF4214 domain-containing protein | - |
| RMHFA_RS00200 (RMHFA_04724) | 42155..43204 | - | 1050 | WP_099781170.1 | site-specific integrase | - |
| RMHFA_RS00205 (RMHFA_04725) | 43206..45017 | - | 1812 | WP_193009571.1 | IS91 family transposase ISSde12 | Transposase |
| RMHFA_RS00210 | 45119..45577 | - | 459 | WP_099781168.1 | helix-turn-helix domain-containing protein | - |
| RMHFA_RS00215 (RMHFA_04727) | 45683..46699 | - | 1017 | WP_099781167.1 | hypothetical protein | - |
| RMHFA_RS00220 (RMHFA_04728b) | 46677..47030 | - | 354 | WP_265838665.1 | hypothetical protein | - |
| RMHFA_RS00225 | 47186..47425 | + | 240 | WP_079253513.1 | helix-turn-helix transcriptional regulator | - |
| RMHFA_RS00230 (RMHFA_04729b) | 47422..47760 | + | 339 | WP_265838668.1 | hypothetical protein | - |
| RMHFA_RS00235 (RMHFA_03821b) | 47751..48107 | + | 357 | WP_099781164.1 | hypothetical protein | - |
| RMHFA_RS00240 (RMHFA_04970) | 48136..49065 | - | 930 | WP_099781163.1 | LysR family transcriptional regulator | - |
| RMHFA_RS00245 (RMHFA_04705) | 49201..49911 | + | 711 | WP_099781162.1 | C-factor | VF |
| RMHFA_RS00250 (RMHFA_03822b) | 49984..50376 | - | 393 | WP_099781161.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| RMHFA_RS00255 (RMHFA_03823b) | 50373..50600 | - | 228 | WP_019463481.1 | hypothetical protein | - |
| RMHFA_RS00260 (RMHFA_03824b) | 50730..50909 | - | 180 | WP_126281794.1 | hypothetical protein | - |
| RMHFA_RS00265 (RMHFA_05599) | 51175..51420 | - | 246 | WP_151904022.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|