MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 35394 bp
Accession: NZ_CP034906 Location: 1..35394 Organism: Roseomonas mucosa strain AD3 Replicon: plasmid p4-AD3
Accession: NZ_CP034906 Location: 1..35394 Organism: Roseomonas mucosa strain AD3 Replicon: plasmid p4-AD3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RMP42_RS22830 | 1..512 | - | 512 | Protein_0 | hypothetical protein | - |
| RMP42_RS22835 (RMP42_03206a) | 509..916 | - | 408 | WP_019463390.1 | PIN domain-containing protein | Toxin Detail |
| RMP42_RS22840 (RMP42_03207a) | 913..1149 | - | 237 | WP_019463391.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RMP42_RS22845 (RMP42_04622a) | 1430..2560 | + | 1131 | WP_115359424.1 | helix-turn-helix domain-containing protein | - |
| RMP42_RS22850 (RMP42_04623) | 2710..3753 | + | 1044 | WP_051544367.1 | hypothetical protein | - |
| RMP42_RS22855 (RMP42_04624) | 3750..4058 | + | 309 | WP_019463350.1 | hypothetical protein | - |
| RMP42_RS22860 (RMP42_04625) | 4078..4380 | + | 303 | WP_265887128.1 | hypothetical protein | - |
| RMP42_RS22865 (RMP42_02544a) | 4429..5928 | + | 1500 | WP_115359153.1 | IS21 family transposase ISMex39 | Transposase |
| RMP42_RS22870 (RMP42_03088a) | 5928..6656 | + | 729 | WP_099780961.1 | IS21 family transposase ISMex39 | Transposase |
| RMP42_RS22875 (RMP42_03826b) | 6726..7178 | + | 453 | Protein_9 | IS66 family transposase ISAli10 | Transposase |
| RMP42_RS22880 (RMP42_05250b) | 7182..7388 | + | 207 | WP_019463438.1 | hypothetical protein | - |
| RMP42_RS22885 (RMP42_03813b) | 7470..7907 | + | 438 | Protein_11 | IS6 family transposase ISRssp3 | Transposase |
| RMP42_RS22890 (RMP42_04421a) | 8116..9291 | - | 1176 | WP_026033573.1 | zinc-dependent alcohol dehydrogenase | - |
| RMP42_RS22895 (RMP42_03813a) | 9481..10191 | - | 711 | WP_058390100.1 | IS6 family transposase ISRssp3 | Transposase |
| RMP42_RS22900 (RMP42_03838) | 10269..10643 | - | 375 | WP_265887129.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| RMP42_RS22905 (RMP42_03837) | 10633..10875 | - | 243 | WP_019463316.1 | hypothetical protein | - |
| RMP42_RS22910 | 11175..11321 | + | 147 | Protein_16 | IS256 family transposase | - |
| RMP42_RS22915 (RMP42_03836) | 11391..12107 | - | 717 | WP_019463317.1 | IS6 family transposase ISBj7 | Transposase |
| RMP42_RS22920 (RMP42_03835) | 12171..12518 | - | 348 | Protein_18 | recombinase family protein | - |
| RMP42_RS22925 (RMP42_03834) | 12618..13019 | - | 402 | WP_019463319.1 | DUF2442 domain-containing protein | - |
| RMP42_RS22930 (RMP42_03833) | 13012..13269 | - | 258 | WP_237719430.1 | DUF4160 domain-containing protein | - |
| RMP42_RS22935 (RMP42_03832) | 13417..15615 | + | 2199 | WP_019463321.1 | ATP-dependent RecD-like DNA helicase | - |
| RMP42_RS22940 (RMP42_03831) | 15823..16470 | + | 648 | WP_193009577.1 | ParA family protein | - |
| RMP42_RS22945 (RMP42_03830) | 17309..18229 | + | 921 | WP_172539900.1 | replication protein RepA | - |
| RMP42_RS22950 | 18378..18565 | - | 188 | Protein_24 | type II toxin-antitoxin system VapC family toxin | - |
| RMP42_RS22955 | 18950..19318 | + | 369 | WP_019463323.1 | IS66 family transposase ISAzs21 | Transposase |
| RMP42_RS22960 (RMP42_03827b) | 19315..19662 | + | 348 | WP_019463324.1 | IS66 family transposase ISAzs20 | Transposase |
| RMP42_RS22965 (RMP42_03826c) | 19792..21315 | + | 1524 | WP_244311148.1 | IS66 family transposase ISAli10 | Transposase |
| RMP42_RS22970 (RMP42_03825) | 21312..21911 | + | 600 | WP_019463326.1 | plasmid pRiA4b ORF-3 family protein | - |
| RMP42_RS22975 (RMP42_03824) | 21980..22339 | + | 360 | WP_147292509.1 | hypothetical protein | - |
| RMP42_RS22980 (RMP42_03823) | 22466..22693 | + | 228 | WP_019463481.1 | hypothetical protein | - |
| RMP42_RS22985 (RMP42_03822) | 22690..23082 | + | 393 | WP_027297401.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| RMP42_RS22990 (RMP42_03821) | 23146..23502 | - | 357 | WP_019463073.1 | hypothetical protein | - |
| RMP42_RS22995 (RMP42_03820) | 23850..25331 | + | 1482 | WP_026033557.1 | IS21 family transposase ISBj11 | Transposase |
| RMP42_RS23000 (RMP42_03819) | 25328..26137 | + | 810 | WP_019463070.1 | IS21 family transposase ISRel5 | Transposase |
| RMP42_RS23005 | 26129..26467 | - | 339 | WP_026033556.1 | hypothetical protein | - |
| RMP42_RS23010 | 26464..26553 | - | 90 | Protein_36 | transcriptional regulator | - |
| RMP42_RS23015 (RMP42_04766d) | 26672..28225 | + | 1554 | WP_075800945.1 | ISL3 family transposase ISMex26 | Transposase |
| RMP42_RS23020 (RMP42_03037) | 28317..29816 | + | 1500 | WP_115359429.1 | IS21 family transposase ISMex39 | Transposase |
| RMP42_RS23025 (RMP42_02545a) | 29816..30544 | + | 729 | Protein_39 | IS21 family transposase ISMex39 | Transposase |
| RMP42_RS23030 | 30628..31265 | + | 638 | Protein_40 | IS630 family transposase ISMex41 | Transposase |
| RMP42_RS23035 | 31647..32039 | + | 393 | WP_255346375.1 | HNH endonuclease signature motif containing protein | - |
| RMP42_RS23040 (RMP42_05251) | 32048..32719 | - | 672 | WP_081798689.1 | hypothetical protein | - |
| RMP42_RS23045 (RMP42_03813e) | 33048..33758 | + | 711 | WP_058390100.1 | IS6 family transposase ISRssp3 | Transposase |
| RMP42_RS23050 (RMP42_03203b) | 34038..34448 | - | 411 | WP_019463149.1 | type II toxin-antitoxin system VapC family toxin | - |
| RMP42_RS23055 (RMP42_03204b) | 34445..34669 | - | 225 | WP_019463148.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| RMP42_RS23060 (RMP42_04619a) | 34782..35394 | - | 613 | WP_265887130.1 | Tn3 family transposase TnpR_ISPa43 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|