MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 156070 bp
Accession: NZ_CP034904 Location: 1..156070 Organism: Roseomonas mucosa strain AD3 Replicon: plasmid p3-AD3
Accession: NZ_CP034904 Location: 1..156070 Organism: Roseomonas mucosa strain AD3 Replicon: plasmid p3-AD3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RMP42_RS21125 | 1..1319 | - | 1319 | WP_265548226.1 | TolC family protein | - |
| RMP42_RS21130 (RMP42_03963) | 1409..1774 | - | 366 | WP_265548227.1 | hypothetical protein | - |
| RMP42_RS21135 (RMP42_03858) | 2805..4157 | - | 1353 | WP_265548228.1 | Osmolarity sensor protein EnvZ | VF |
| RMP42_RS21140 (RMP42_03857) | 4154..4945 | - | 792 | WP_265548229.1 | Transcriptional regulatory protein OmpR | VF |
| RMP42_RS21145 (RMP42_05038) | 6487..6675 | - | 189 | WP_265548231.1 | IS5 family transposase ISMpo8 | Transposase |
| RMP42_RS21150 | 6617..7194 | + | 578 | Protein_5 | IS5 family transposase ISMpo8 | Transposase |
| RMP42_RS21155 (RMP42_04766g) | 7212..8822 | - | 1611 | WP_265886938.1 | ISL3 family transposase ISAzs13 | Transposase |
| RMP42_RS21160 (RMP42_04967) | 8926..9105 | + | 180 | Protein_7 | IS5 family transposase ISMpo7 | Transposase |
| RMP42_RS21165 (RMP42_03958) | 10814..11293 | + | 480 | WP_265886939.1 | helix-turn-helix domain-containing protein | - |
| RMP42_RS21170 (RMP42_04702) | 12135..13363 | + | 1229 | WP_265886940.1 | IS3 family transposase ISNmu3 | Transposase |
| RMP42_RS21175 | 13377..13694 | - | 318 | Protein_10 | recombinase family protein | - |
| RMP42_RS21180 (RMP42_03847) | 13933..14934 | + | 1002 | WP_265886941.1 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| RMP42_RS21185 (RMP42_03846) | 14931..15689 | + | 759 | WP_265886942.1 | hypothetical protein | - |
| RMP42_RS21190 (RMP42_03953) | 15686..16480 | + | 795 | WP_265886943.1 | segregation/condensation protein A | - |
| RMP42_RS21195 (RMP42_05920) | 16600..16776 | + | 177 | WP_265886944.1 | hypothetical protein | - |
| RMP42_RS21200 (RMP42_05919) | 16845..17348 | + | 504 | WP_265886945.1 | hypothetical protein | - |
| RMP42_RS21205 (RMP42_00657f) | 17357..18085 | - | 729 | WP_115359213.1 | IS21 family transposase ISMex39 | Transposase |
| RMP42_RS21210 (RMP42_00656e) | 18085..19584 | - | 1500 | WP_019463079.1 | IS21 family transposase ISMex39 | Transposase |
| RMP42_RS21215 (RMP42_04798b) | 19774..20607 | + | 834 | WP_265886946.1 | hypothetical protein | - |
| RMP42_RS21220 (RMP42_04799b) | 20610..21164 | + | 555 | WP_265886947.1 | hypothetical protein | - |
| RMP42_RS21225 (RMP42_05810) | 21525..22004 | - | 480 | WP_265886948.1 | hypothetical protein | - |
| RMP42_RS21230 (RMP42_04730b) | 22006..24255 | - | 2250 | WP_265886949.1 | DotA/TraY family protein | - |
| RMP42_RS21235 (RMP42_05179b) | 24403..25812 | - | 1410 | WP_265886950.1 | hypothetical protein | - |
| RMP42_RS21240 (RMP42_05180b) | 25824..27014 | - | 1191 | WP_265886951.1 | hypothetical protein | - |
| RMP42_RS21245 (RMP42_05181b) | 27035..27574 | - | 540 | WP_265886952.1 | hypothetical protein | - |
| RMP42_RS21250 (RMP42_05182) | 27574..28029 | - | 456 | WP_265886953.1 | hypothetical protein | - |
| RMP42_RS21255 (RMP42_05918) | 28675..29103 | + | 429 | WP_265886954.1 | helix-turn-helix transcriptional regulator | - |
| RMP42_RS21260 (RMP42_05081b) | 29342..30130 | + | 789 | WP_265886955.1 | hypothetical protein | - |
| RMP42_RS21265 (RMP42_05917) | 30188..30370 | + | 183 | WP_265886956.1 | hypothetical protein | - |
| RMP42_RS21270 (RMP42_05082b) | 30434..31063 | + | 630 | WP_265886957.1 | DotI/IcmL/TraM family protein | - |
| RMP42_RS21275 (RMP42_05083b) | 31084..32070 | + | 987 | WP_265886958.1 | hypothetical protein | VF |
| RMP42_RS21280 (RMP42_05084a) | 32070..33410 | + | 1341 | WP_265886959.1 | DotG/IcmE/VirB10 family protein | - |
| RMP42_RS21285 (RMP42_05085) | 33481..34923 | + | 1443 | WP_265886960.1 | hypothetical protein | - |
| RMP42_RS21290 (RMP42_05086a) | 34935..35477 | + | 543 | WP_265886961.1 | hypothetical protein | - |
| RMP42_RS21295 (RMP42_05087a) | 35628..35990 | + | 363 | WP_265887036.1 | hypothetical protein | - |
| RMP42_RS21300 (RMP42_05088a) | 35996..36679 | + | 684 | WP_265886962.1 | HNH endonuclease | - |
| RMP42_RS21305 (RMP42_05089a) | 36676..39735 | + | 3060 | WP_265886963.1 | hypothetical protein | VF |
| RMP42_RS21310 (RMP42_05789) | 39786..40178 | - | 393 | WP_265887037.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RMP42_RS21315 (RMP42_05788) | 40190..40438 | - | 249 | WP_265886964.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RMP42_RS21320 (RMP42_03950a) | 40595..41068 | + | 474 | WP_265886965.1 | DotD/TraH family lipoprotein | - |
| RMP42_RS21325 (RMP42_03949a) | 41061..42026 | + | 966 | WP_265886966.1 | hypothetical protein | VF |
| RMP42_RS21330 (RMP42_03948a) | 42023..43192 | + | 1170 | WP_265886967.1 | Twitching mobility protein | VF |
| RMP42_RS21335 (RMP42_03947a) | 43192..43440 | + | 249 | WP_198382690.1 | hypothetical protein | VF |
| RMP42_RS21340 (RMP42_03946b) | 43437..44210 | + | 774 | WP_265886968.1 | hypothetical protein | - |
| RMP42_RS21345 (RMP42_00104b) | 44267..44836 | - | 570 | WP_265886969.1 | DsbE family thiol:disulfide interchange protein | - |
| RMP42_RS21350 (RMP42_00105b) | 44833..46812 | - | 1980 | WP_265886970.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| RMP42_RS21355 (RMP42_00794a) | 46809..48476 | - | 1668 | WP_265886971.1 | apolipoprotein N-acyltransferase | - |
| RMP42_RS21360 (RMP42_02608b) | 48516..49421 | - | 906 | WP_265886972.1 | MBL fold metallo-hydrolase | - |
| RMP42_RS21365 (RMP42_00245c) | 49442..50269 | - | 828 | WP_265886973.1 | undecaprenyl-diphosphate phosphatase | - |
| RMP42_RS21370 (RMP42_03398a) | 50266..52869 | - | 2604 | WP_265887038.1 | heavy metal translocating P-type ATPase | - |
| RMP42_RS21375 (RMP42_01397b) | 53825..54178 | - | 354 | WP_265886974.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| RMP42_RS21380 | 54825..55268 | + | 444 | WP_265886975.1 | SHOCT domain-containing protein | - |
| RMP42_RS21385 (RMP42_05914) | 55326..55874 | + | 549 | WP_265886976.1 | Spy/CpxP family protein refolding chaperone | - |
| RMP42_RS21390 (RMP42_03866b) | 55915..56637 | + | 723 | WP_265886977.1 | cytochrome c biogenesis protein CcdA | - |
| RMP42_RS21395 (RMP42_03867b) | 56616..57176 | + | 561 | WP_265886978.1 | Lipoprotein signal peptidase | VF |
| RMP42_RS21400 (RMP42_04092b) | 57196..57669 | + | 474 | WP_265886979.1 | copper chaperone PCu(A)C | - |
| RMP42_RS21405 (RMP42_03871b) | 57666..58295 | + | 630 | WP_265886980.1 | SCO family protein | - |
| RMP42_RS21410 (RMP42_05913) | 58550..59416 | - | 867 | WP_265886981.1 | DUF932 domain-containing protein | - |
| RMP42_RS21415 (RMP42_05912) | 59894..60517 | + | 624 | WP_265886982.1 | hypothetical protein | - |
| RMP42_RS21420 (RMP42_05911) | 61026..61466 | + | 441 | WP_265886983.1 | hypothetical protein | - |
| RMP42_RS21425 (RMP42_05910) | 61509..62084 | + | 576 | WP_265886984.1 | Type IV secretion system protein virB1 | VF |
| RMP42_RS21430 (RMP42_05909) | 62095..62310 | + | 216 | WP_132295443.1 | hypothetical protein | - |
| RMP42_RS21435 (RMP42_05908) | 62316..62633 | + | 318 | WP_265886985.1 | hypothetical protein | VF |
| RMP42_RS21440 (RMP42_02680a) | 62626..65142 | + | 2517 | WP_265886986.1 | Type IV secretion system protein virB4 | VF |
| RMP42_RS21445 (RMP42_05907) | 65139..65891 | + | 753 | WP_265886987.1 | type IV secretion system protein | - |
| RMP42_RS21450 (RMP42_05906) | 65888..66445 | + | 558 | WP_265886988.1 | EexN family lipoprotein | - |
| RMP42_RS21455 (RMP42_05905) | 66442..67461 | + | 1020 | WP_265886989.1 | type IV secretion system protein | - |
| RMP42_RS21460 (RMP42_05904) | 67475..67645 | + | 171 | WP_265886990.1 | hypothetical protein | - |
| RMP42_RS21465 (RMP42_05903) | 67642..68403 | + | 762 | WP_265886991.1 | type IV secretion system protein | - |
| RMP42_RS21470 (RMP42_05902) | 68400..69368 | + | 969 | WP_265886992.1 | Protein virB9 | VF |
| RMP42_RS21475 (RMP42_05901) | 69365..70426 | + | 1062 | WP_265886993.1 | Type IV secretion system protein virB10 | VF |
| RMP42_RS21480 (RMP42_05716b) | 70426..71337 | + | 912 | WP_265886994.1 | Type IV secretion system protein VirB11 | VF |
| RMP42_RS21485 (RMP42_02685) | 71334..73133 | + | 1800 | WP_265886995.1 | type IV secretory system conjugative DNA transfer family protein | - |
| RMP42_RS21490 (RMP42_04531b) | 73119..76457 | - | 3339 | WP_265886996.1 | hypothetical protein | Relaxase |
| RMP42_RS21495 (RMP42_05787) | 76464..76757 | - | 294 | WP_265886997.1 | hypothetical protein | - |
| RMP42_RS21500 (RMP42_03932a) | 77373..78158 | + | 786 | WP_265886998.1 | hypothetical protein | - |
| RMP42_RS21505 (RMP42_05785) | 78146..78667 | + | 522 | WP_265886999.1 | hypothetical protein | - |
| RMP42_RS21510 (RMP42_02066) | 79260..80207 | - | 948 | WP_265887000.1 | replication initiator protein A | - |
| RMP42_RS21515 (RMP42_05784) | 80209..80475 | - | 267 | WP_265887001.1 | hypothetical protein | - |
| RMP42_RS21520 (RMP42_02065a) | 80501..81136 | - | 636 | WP_265887002.1 | Chromosome-partitioning ATPase Soj | VF |
| RMP42_RS21525 (RMP42_03898a) | 81282..82217 | - | 936 | WP_265887003.1 | zincin-like metallopeptidase domain-containing protein | - |
| RMP42_RS21530 (RMP42_05900) | 82916..83221 | + | 306 | WP_265887004.1 | PIN domain-containing protein | - |
| RMP42_RS21535 (RMP42_05899) | 83427..84218 | - | 792 | WP_265887005.1 | hypothetical protein | - |
| RMP42_RS21540 (RMP42_05898) | 84284..85504 | + | 1221 | WP_265887006.1 | hypothetical protein | - |
| RMP42_RS21545 (RMP42_05897) | 85997..87058 | + | 1062 | WP_265887007.1 | hypothetical protein | - |
| RMP42_RS21550 (RMP42_05896) | 87036..87461 | + | 426 | WP_265887008.1 | ASCH domain-containing protein | - |
| RMP42_RS21555 (RMP42_05895) | 87711..88667 | - | 957 | WP_265887009.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RMP42_RS21560 (RMP42_05894) | 88664..89053 | - | 390 | WP_265887010.1 | helix-turn-helix domain-containing protein | - |
| RMP42_RS21565 (RMP42_05893) | 89210..89947 | + | 738 | WP_265887011.1 | multiubiquitin domain-containing protein | - |
| RMP42_RS21570 (RMP42_05892) | 89944..91329 | + | 1386 | WP_265887012.1 | ThiF family adenylyltransferase | - |
| RMP42_RS21575 (RMP42_05413) | 91773..92234 | - | 462 | WP_265887013.1 | hypothetical protein | - |
| RMP42_RS21580 (RMP42_05891) | 92227..92490 | - | 264 | WP_265887014.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| RMP42_RS21585 (RMP42_02756) | 92644..93333 | + | 690 | WP_265887015.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| RMP42_RS21590 (RMP42_03861b) | 93546..96734 | - | 3189 | WP_265887016.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| RMP42_RS21595 (RMP42_05890) | 96731..98203 | - | 1473 | WP_265887017.1 | efflux RND transporter periplasmic adaptor subunit | - |
| RMP42_RS21600 (RMP42_05889) | 98220..98621 | - | 402 | WP_265887018.1 | FixH family protein | - |
| RMP42_RS21605 (RMP42_05888) | 98748..99152 | - | 405 | WP_265887019.1 | hypothetical protein | - |
| RMP42_RS21610 (RMP42_05887) | 99215..99913 | + | 699 | WP_265887020.1 | class I SAM-dependent methyltransferase | - |
| RMP42_RS21615 (RMP42_05886) | 99910..100407 | + | 498 | WP_265887021.1 | hypothetical protein | - |
| RMP42_RS21620 (RMP42_02049) | 100432..100647 | - | 216 | Protein_99 | copper-transporting ATPase | - |
| RMP42_RS21625 (RMP42_05885) | 101005..101661 | + | 657 | WP_265887022.1 | class I SAM-dependent methyltransferase | - |
| RMP42_RS21630 (RMP42_05884) | 101830..102246 | - | 417 | WP_265887023.1 | MAPEG family protein | - |
| RMP42_RS21635 (RMP42_05882) | 102698..103951 | - | 1254 | WP_265887024.1 | cytochrome P450 | - |
| RMP42_RS21640 (RMP42_05881) | 104019..104648 | - | 630 | WP_265887025.1 | cation transporter | - |
| RMP42_RS21645 (RMP42_03875b) | 104786..105421 | - | 636 | WP_265887026.1 | peroxiredoxin | - |
| RMP42_RS21650 (RMP42_05880) | 105771..106319 | - | 549 | WP_265887027.1 | hypothetical protein | - |
| RMP42_RS21655 (RMP42_01073a) | 106346..107761 | - | 1416 | WP_265887028.1 | dihydrolipoyl dehydrogenase | - |
| RMP42_RS21660 (RMP42_02610a) | 107980..108951 | + | 972 | WP_265887029.1 | bile acid:sodium symporter | - |
| RMP42_RS21665 (RMP42_00104a) | 109008..109577 | - | 570 | WP_265887030.1 | DsbE family thiol:disulfide interchange protein | - |
| RMP42_RS21670 (RMP42_00105a) | 109574..111553 | - | 1980 | WP_265887031.1 | Cytochrome c-type biogenesis protein CcmF | VF |
| RMP42_RS21675 (RMP42_02608a) | 112021..112926 | - | 906 | WP_265887032.1 | MBL fold metallo-hydrolase | - |
| RMP42_RS21680 (RMP42_00245b) | 112947..113759 | - | 813 | WP_265887039.1 | undecaprenyl-diphosphate phosphatase | - |
| RMP42_RS21685 (RMP42_05783) | 113771..114214 | - | 444 | Protein_112 | cation-transporting P-type ATPase | - |
| RMP42_RS21690 | 114172..114396 | - | 225 | WP_265887033.1 | hypothetical protein | - |
| RMP42_RS21695 (RMP42_01397a) | 114386..114742 | - | 357 | WP_265887034.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| RMP42_RS21700 (RMP42_03862a) | 114967..115341 | - | 375 | WP_198384093.1 | hypothetical protein | - |
| RMP42_RS21705 (RMP42_03905) | 116216..117532 | - | 1317 | WP_265887035.1 | N-6 DNA methylase | - |
| RMP42_RS21710 (RMP42_03903) | 117940..118890 | - | 951 | WP_265548272.1 | hypothetical protein | - |
| RMP42_RS21715 (RMP42_03902) | 118887..119504 | - | 618 | WP_265548273.1 | hypothetical protein | - |
| RMP42_RS21720 (RMP42_03901) | 119557..120021 | - | 465 | WP_265548274.1 | hypothetical protein | - |
| RMP42_RS21725 (RMP42_03900) | 120194..120508 | - | 315 | WP_265548275.1 | hypothetical protein | - |
| RMP42_RS21730 (RMP42_03899) | 120567..121577 | - | 1011 | WP_265548276.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| RMP42_RS21735 (RMP42_03898b) | 121574..122548 | - | 975 | WP_265548277.1 | zincin-like metallopeptidase domain-containing protein | - |
| RMP42_RS21740 (RMP42_03897) | 122698..123030 | - | 333 | WP_265548278.1 | hypothetical protein | - |
| RMP42_RS21745 (RMP42_03896) | 123043..123390 | - | 348 | WP_265548279.1 | hypothetical protein | - |
| RMP42_RS21750 (RMP42_03895) | 123548..123931 | - | 384 | WP_265548280.1 | hypothetical protein | - |
| RMP42_RS21755 (RMP42_03894) | 124048..124377 | - | 330 | WP_265548281.1 | hypothetical protein | - |
| RMP42_RS21760 (RMP42_03893) | 124374..125111 | - | 738 | WP_265548282.1 | hypothetical protein | - |
| RMP42_RS21765 (RMP42_03892) | 125163..125753 | - | 591 | WP_265548283.1 | hypothetical protein | - |
| RMP42_RS21770 (RMP42_03891) | 125811..126179 | - | 369 | WP_265548284.1 | hypothetical protein | - |
| RMP42_RS21775 (RMP42_03890) | 126176..126349 | - | 174 | WP_265548285.1 | hypothetical protein | - |
| RMP42_RS21780 (RMP42_03888) | 126602..128665 | - | 2064 | WP_265548286.1 | UvrD-helicase domain-containing protein | - |
| RMP42_RS21785 (RMP42_03887) | 128649..128960 | - | 312 | WP_265548287.1 | hypothetical protein | - |
| RMP42_RS21790 (RMP42_03886) | 128984..129937 | - | 954 | WP_265548288.1 | DUF3991 and TOPRIM domain-containing protein | - |
| RMP42_RS21795 (RMP42_02065b) | 130245..130874 | + | 630 | WP_265548289.1 | Chromosome-partitioning ATPase Soj | VF |
| RMP42_RS21800 (RMP42_04856) | 130972..131115 | + | 144 | WP_265548201.1 | plasmid partition protein ParG | - |
| RMP42_RS21805 (RMP42_03885) | 131316..134606 | - | 3291 | WP_265548202.1 | error-prone DNA polymerase | - |
| RMP42_RS21810 (RMP42_03884) | 134614..136074 | - | 1461 | WP_265548203.1 | DNA polymerase Y family protein | - |
| RMP42_RS21815 (RMP42_03883) | 136118..136351 | - | 234 | WP_265548204.1 | hypothetical protein | - |
| RMP42_RS21820 (RMP42_04857) | 136689..137522 | + | 834 | WP_265548205.1 | replication initiator protein A | - |
| RMP42_RS21825 (RMP42_04858) | 137927..138163 | + | 237 | WP_265548206.1 | hypothetical protein | - |
| RMP42_RS21830 (RMP42_05041) | 138182..138532 | + | 351 | WP_265548207.1 | hypothetical protein | - |
| RMP42_RS21835 (RMP42_05040) | 138920..139501 | + | 582 | WP_265548208.1 | hypothetical protein | - |
| RMP42_RS21840 (RMP42_03876) | 139773..140189 | - | 417 | WP_265548209.1 | helix-turn-helix domain-containing protein | - |
| RMP42_RS21845 (RMP42_03875a) | 140311..140973 | + | 663 | WP_265548210.1 | peroxiredoxin | - |
| RMP42_RS21850 (RMP42_03874) | 140973..141857 | + | 885 | WP_265548211.1 | MBL fold metallo-hydrolase | - |
| RMP42_RS21855 (RMP42_03873) | 141863..142321 | + | 459 | WP_265548212.1 | disulfide bond formation protein B | - |
| RMP42_RS21860 (RMP42_03872) | 142318..142989 | + | 672 | WP_265548213.1 | thioredoxin domain-containing protein | - |
| RMP42_RS21865 (RMP42_03871a) | 143035..143679 | + | 645 | WP_265548214.1 | SCO family protein | - |
| RMP42_RS21870 (RMP42_03870) | 143676..144146 | + | 471 | WP_265548215.1 | copper chaperone PCu(A)C | - |
| RMP42_RS21875 (RMP42_03869) | 144318..144443 | + | 126 | WP_265548216.1 | hypothetical protein | - |
| RMP42_RS21880 (RMP42_03868) | 144523..145848 | - | 1326 | WP_265548217.1 | MFS transporter | - |
| RMP42_RS21885 (RMP42_03867a) | 145926..146405 | - | 480 | WP_265548218.1 | Lipoprotein signal peptidase | VF |
| RMP42_RS21890 (RMP42_03866a) | 146440..147162 | - | 723 | WP_265548219.1 | cytochrome c biogenesis protein CcdA | - |
| RMP42_RS21895 (RMP42_03865) | 147159..147329 | - | 171 | WP_265548220.1 | hypothetical protein | - |
| RMP42_RS21900 (RMP42_03864) | 147329..149878 | - | 2550 | WP_265548221.1 | heavy metal translocating P-type ATPase | - |
| RMP42_RS21905 (RMP42_03863) | 149972..150901 | - | 930 | WP_265548222.1 | cation diffusion facilitator family transporter | - |
| RMP42_RS21910 (RMP42_03862b) | 151111..151485 | - | 375 | WP_265548223.1 | hypothetical protein | - |
| RMP42_RS21915 (RMP42_03861a) | 151552..154797 | - | 3246 | WP_265548224.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| RMP42_RS21920 (RMP42_03860) | 154811..155848 | - | 1038 | WP_265548225.1 | efflux RND transporter periplasmic adaptor subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|