MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94980 bp
Accession: NZ_CP034809 Location: 1..94980 Organism: Escherichia coli strain 08-3914 Replicon: plasmid p08-3914
Accession: NZ_CP034809 Location: 1..94980 Organism: Escherichia coli strain 08-3914 Replicon: plasmid p08-3914
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYP36_RS28290 () | 448..1011 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| AYP36_RS28295 () | 1097..1558 | - | 462 | WP_001304227.1 | hypothetical protein | - |
| AYP36_RS29155 () | 1628..1834 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| AYP36_RS28305 () | 1860..2312 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| AYP36_RS28310 () | 2369..2602 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| AYP36_RS28315 () | 2668..4626 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| AYP36_RS28320 () | 4681..5115 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| AYP36_RS28325 () | 5112..5873 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 5842..6040 | + | 199 | NuclAT_0 | - | - |
| - () | 5842..6040 | + | 199 | NuclAT_0 | - | - |
| - () | 5842..6040 | + | 199 | NuclAT_0 | - | - |
| - () | 5842..6040 | + | 199 | NuclAT_0 | - | - |
| AYP36_RS28330 () | 6105..6263 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| AYP36_RS28335 () | 6397..8418 | + | 2022 | Protein_10 | hypothetical protein | Relaxase |
| AYP36_RS28340 () | 8486..8917 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| AYP36_RS28360 () | 10874..11223 | - | 350 | Protein_13 | IS3 family transposase IS3H | Transposase |
| AYP36_RS28365 () | 11317..11580 | + | 264 | Protein_14 | IS21 family transposase ISEc62 | Transposase |
| AYP36_RS28370 () | 11620..11740 | + | 121 | Protein_15 | IS21 family transposase ISEc62 | Transposase |
| AYP36_RS28375 () | 11737..11889 | + | 153 | Protein_16 | IS1 family transposase | - |
| AYP36_RS28380 () | 11996..21505 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| AYP36_RS28385 () | 21579..21803 | + | 225 | Protein_18 | IS3 family transposase IS3H | Transposase |
| AYP36_RS28390 () | 21871..22041 | - | 171 | Protein_19 | IS3 family transposase IS1203 | Transposase |
| AYP36_RS28395 () | 22048..22299 | - | 252 | Protein_20 | IS3 family transposase IS1203 | Transposase |
| AYP36_RS28400 () | 22356..23744 | + | 1389 | Protein_21 | Multifunctional conjugation protein TraI | Relaxase |
| AYP36_RS28405 () | 23764..24510 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| AYP36_RS28410 () | 24569..25429 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| AYP36_RS28415 () | 25532..26092 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| AYP36_RS28420 () | 26225..26437 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| AYP36_RS28425 () | 26682..27143 | + | 462 | WP_001233856.1 | thermonuclease family protein | - |
| AYP36_RS28430 () | 27189..27398 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| AYP36_RS28435 () | 27436..27774 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| AYP36_RS28440 () | 28014..28268 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| AYP36_RS28450 () | 28504..28578 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| AYP36_RS28455 () | 28571..29428 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| AYP36_RS28470 () | 30340..30624 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AYP36_RS28475 () | 30624..30899 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AYP36_RS28480 () | 30994..31200 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| AYP36_RS28485 () | 31300..31515 | - | 216 | Protein_35 | transposase | - |
| AYP36_RS28490 () | 31559..32125 | - | 567 | Protein_36 | IS3 family transposase ISSd1 | Transposase |
| AYP36_RS28495 () | 32125..32541 | - | 417 | Protein_37 | IS91 family transposase | - |
| AYP36_RS28500 () | 32541..32726 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| AYP36_RS28505 () | 32903..35113 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| AYP36_RS28510 () | 35157..35546 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| AYP36_RS28515 () | 35603..36591 | + | 989 | Protein_41 | IS3 family transposase IS629 | Transposase |
| AYP36_RS28525 () | 36772..40674 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| AYP36_RS28530 () | 40865..42078 | + | 1214 | WP_162829242.1 | IS3 family transposase IS629 | Transposase |
| AYP36_RS28540 () | 42243..42724 | - | 482 | Protein_44 | IS1 family transposase IS1N | Transposase |
| AYP36_RS28550 () | 44165..44986 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| AYP36_RS28555 () | 44986..46092 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| AYP36_RS28560 () | 46182..47903 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| AYP36_RS28565 () | 47977..48975 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AYP36_RS28570 () | 49028..49216 | + | 189 | Protein_49 | hypothetical protein | - |
| AYP36_RS28575 () | 49343..49723 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| AYP36_RS28580 () | 49720..50067 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| AYP36_RS28585 () | 50117..51655 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| AYP36_RS28590 () | 51770..51856 | - | 87 | Protein_53 | IS3 family transposase ISEhe3 | Transposase |
| AYP36_RS28600 () | 52297..54993 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| AYP36_RS28605 () | 55080..55955 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| AYP36_RS28610 () | 55956..57923 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| AYP36_RS28615 () | 57923..59428 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| AYP36_RS28620 () | 59430..60653 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| AYP36_RS28625 () | 60684..61117 | + | 434 | Protein_59 | Type II secretion system protein G | VF |
| AYP36_RS28630 () | 61114..61668 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| AYP36_RS28635 () | 61683..62030 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| AYP36_RS28640 () | 62027..62626 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| AYP36_RS28645 () | 62623..63600 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| AYP36_RS28650 () | 63639..64811 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| AYP36_RS28655 () | 64798..65310 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| AYP36_RS28660 () | 65368..66201 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| AYP36_RS28665 () | 66293..66694 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| AYP36_RS28675 () | 66873..68044 | + | 1172 | Protein_68 | IS3 family transposase ISLad1 | Transposase |
| AYP36_RS28685 () | 68585..69100 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| AYP36_RS28690 () | 69102..72098 | + | 2997 | WP_000217733.1 | Hemolysin, chromosomal | VF |
| AYP36_RS28695 () | 72148..74268 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| AYP36_RS28700 () | 74272..75711 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| AYP36_RS29160 () | 75832..76324 | + | 493 | Protein_73 | Transcriptional repressor MprA | VF |
| AYP36_RS28720 () | 76455..76685 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| AYP36_RS28725 () | 76806..77546 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| AYP36_RS28730 () | 77831..78808 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| AYP36_RS28740 () | 79216..79416 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| AYP36_RS28745 () | 79413..80033 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| AYP36_RS28750 () | 80030..80713 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| AYP36_RS28755 () | 81172..81390 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AYP36_RS28760 () | 81392..81697 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AYP36_RS28765 () | 81698..82504 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| AYP36_RS28780 () | 85180..86346 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| AYP36_RS28785 () | 86346..87317 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AYP36_RS28800 () | 88012..88914 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| AYP36_RS28805 () | 88918..89223 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| AYP36_RS28810 () | 89300..89983 | + | 684 | WP_000085945.1 | DNA methylase | - |
| AYP36_RS28815 () | 89984..90205 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| AYP36_RS28820 () | 90099..90653 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| AYP36_RS29165 () | 90699..91475 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| AYP36_RS28835 () | 91783..92085 | + | 303 | WP_077695738.1 | antirestriction protein | - |
| AYP36_RS28840 () | 92132..92554 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| AYP36_RS28845 () | 92551..92742 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| AYP36_RS29170 () | 92712..93221 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| AYP36_RS28860 () | 93738..93968 | + | 231 | WP_000218642.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|