MGE detailed information
MGE type: Prophage MGE length: 56137 bp
Accession: NZ_CP034808 Location: 4407539..4463675 Organism: Escherichia coli strain 08-3914 Replicon: chromosome
Accession: NZ_CP034808 Location: 4407539..4463675 Organism: Escherichia coli strain 08-3914 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYP36_RS22025 () | 4403007..4403978 | - | 972 | WP_000564730.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| AYP36_RS22030 () | 4403975..4404718 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| AYP36_RS22035 () | 4404759..4405154 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| AYP36_RS22040 () | 4405207..4405554 | - | 348 | WP_000599617.1 | DUF72 domain-containing protein | - |
| AYP36_RS22045 () | 4405642..4406562 | - | 921 | WP_000658747.1 | hypothetical protein | - |
| AYP36_RS22050 () | 4407539..4408063 | - | 525 | WP_000258747.1 | HNH endonuclease | - |
| AYP36_RS22055 () | 4409536..4410090 | + | 555 | WP_000999794.1 | hypothetical protein | - |
| AYP36_RS22060 () | 4410092..4410373 | + | 282 | WP_000790878.1 | hypothetical protein | - |
| AYP36_RS22065 () | 4410373..4410588 | + | 216 | WP_000882279.1 | hypothetical protein | - |
| AYP36_RS22070 () | 4410585..4410872 | + | 288 | WP_000805962.1 | HNH endonuclease | - |
| AYP36_RS22075 () | 4411029..4411358 | + | 330 | WP_001208714.1 | hypothetical protein | - |
| AYP36_RS22080 () | 4411847..4412557 | + | 711 | WP_000180367.1 | hypothetical protein | - |
| AYP36_RS22085 () | 4412580..4412798 | + | 219 | WP_000461373.1 | hypothetical protein | - |
| AYP36_RS22090 () | 4412907..4414985 | + | 2079 | WP_000033299.1 | tape measure protein | - |
| AYP36_RS22095 () | 4415220..4415993 | + | 774 | WP_000640575.1 | hypothetical protein | - |
| AYP36_RS22100 () | 4416008..4417195 | - | 1188 | Protein_4184 | hypothetical protein ; Integrase | Integrase |
| AYP36_RS22105 () | 4417251..4418464 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| AYP36_RS22110 () | 4418506..4418844 | - | 339 | Protein_4186 | recombinase family protein | - |
| AYP36_RS22115 () | 4418912..4419406 | - | 495 | WP_000639266.1 | DUF72 domain-containing protein | - |
| AYP36_RS22120 () | 4419403..4419969 | - | 567 | WP_000891621.1 | hydrolase | - |
| AYP36_RS22125 () | 4420279..4422051 | + | 1773 | WP_001258685.1 | aspartate--tRNA ligase | - |
| AYP36_RS22130 () | 4422169..4422621 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| AYP36_RS22135 () | 4422650..4423390 | + | 741 | WP_000907234.1 | hypothetical protein | VF |
| AYP36_RS22140 () | 4423425..4423946 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| AYP36_RS22145 () | 4423948..4424550 | - | 603 | WP_001024949.1 | YebB family permuted papain-like enzyme | - |
| AYP36_RS22150 () | 4424621..4424686 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| AYP36_RS22155 () | 4424825..4425436 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| AYP36_RS22160 () | 4425445..4426455 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| AYP36_RS22165 () | 4426701..4427486 | - | 786 | WP_000571476.1 | hypothetical protein | VF |
| AYP36_RS22170 () | 4427483..4428238 | - | 756 | WP_000202996.1 | hypothetical protein | VF |
| AYP36_RS22175 () | 4428317..4429249 | + | 933 | WP_001303192.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| AYP36_RS22180 () | 4429265..4430587 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| AYP36_RS22185 () | 4430707..4431678 | + | 972 | WP_000448391.1 | hypothetical protein | VF |
| AYP36_RS22190 () | 4431809..4433251 | - | 1443 | WP_000091169.1 | pyruvate kinase | - |
| AYP36_RS22195 () | 4433379..4434248 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| AYP36_RS22200 () | 4434586..4436061 | + | 1476 | WP_000301737.1 | glucose-6-phosphate dehydrogenase | - |
| AYP36_RS22205 () | 4436296..4438107 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| AYP36_RS22210 () | 4438144..4438785 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AYP36_RS22215 () | 4438841..4440019 | - | 1179 | WP_000173471.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AYP36_RS22220 () | 4440153..4440443 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| AYP36_RS22225 () | 4440510..4440866 | + | 357 | WP_001295500.1 | protein YebF | - |
| AYP36_RS22230 () | 4441193..4441852 | + | 660 | WP_000024742.1 | tellurite resistance TerB family protein | - |
| AYP36_RS22235 () | 4442061..4444121 | + | 2061 | WP_000936917.1 | oligopeptidase B | - |
| AYP36_RS22240 () | 4444118..4444780 | - | 663 | WP_000944244.1 | exodeoxyribonuclease X | - |
| AYP36_RS22245 () | 4444804..4445460 | - | 657 | WP_000011656.1 | carbon-nitrogen hydrolase family protein | - |
| AYP36_RS22250 () | 4445562..4445792 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| AYP36_RS22255 () | 4445931..4446305 | + | 375 | WP_000168751.1 | CopC domain-containing protein YobA | - |
| AYP36_RS22260 () | 4446309..4447181 | + | 873 | WP_000879314.1 | copper homeostasis membrane protein CopD | - |
| AYP36_RS22265 () | 4447194..4447535 | + | 342 | WP_000976483.1 | YebY family protein | - |
| - () | 4447563..4447834 | - | 272 | - | - | Antitoxin Detail |
| - () | 4447693..4447796 | + | 104 | - | - | Toxin Detail |
| AYP36_RS22270 () | 4447931..4448587 | + | 657 | WP_000812736.1 | protein-serine/threonine phosphatase | - |
| AYP36_RS22275 () | 4448588..4448779 | - | 192 | WP_001296140.1 | YebW family protein | - |
| AYP36_RS22280 () | 4448884..4449120 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| AYP36_RS22285 () | 4449238..4450677 | - | 1440 | WP_001302304.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AYP36_RS22290 () | 4450758..4453391 | - | 2634 | WP_001302055.1 | hypothetical protein | VF |
| AYP36_RS22295 () | 4453360..4454643 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| AYP36_RS22300 () | 4454773..4455270 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| AYP36_RS22305 () | 4455367..4456065 | + | 699 | WP_000431368.1 | RNA chaperone ProQ | - |
| AYP36_RS22310 () | 4456085..4458133 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| AYP36_RS22315 () | 4458325..4459206 | + | 882 | WP_000984517.1 | protease HtpX | - |
| AYP36_RS22320 () | 4459252..4460625 | - | 1374 | WP_001127211.1 | MFS transporter | - |
| AYP36_RS22325 () | 4460802..4461593 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| AYP36_RS22330 () | 4461737..4461976 | - | 240 | WP_001211007.1 | membrane protein | - |
| AYP36_RS22335 () | 4462136..4462279 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| AYP36_RS22340 () | 4462354..4462641 | + | 288 | WP_001006862.1 | YebO family protein | - |
| AYP36_RS22345 () | 4463310..4463453 | + | 144 | WP_001295496.1 | YobF family protein | - |
| AYP36_RS22350 () | 4463466..4463675 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| AYP36_RS22355 () | 4463841..4464650 | + | 810 | WP_000010147.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| AYP36_RS22360 () | 4464647..4465213 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| AYP36_RS22365 () | 4465643..4466101 | - | 459 | WP_000156258.1 | DUF986 family protein | - |
| AYP36_RS22370 () | 4466156..4467007 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| AYP36_RS22375 () | 4467020..4467820 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|