MGE detailed information
MGE type: Genomic_island MGE length: 21210 bp
Accession: NZ_CP034808 Location: 1378991..1400200 Organism: Escherichia coli strain 08-3914 Replicon: chromosome
Accession: NZ_CP034808 Location: 1378991..1400200 Organism: Escherichia coli strain 08-3914 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYP36_RS06570 () | 1374717..1375259 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| AYP36_RS06575 () | 1375552..1377702 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| AYP36_RS06580 () | 1377752..1377955 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| AYP36_RS06585 () | 1377966..1378922 | + | 957 | WP_001297640.1 | GTPase | - |
| AYP36_RS06590 () | 1378991..1380349 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| AYP36_RS06595 () | 1380358..1380642 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| AYP36_RS06600 () | 1380920..1383352 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| AYP36_RS06605 () | 1383419..1384888 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| AYP36_RS06610 () | 1384888..1386642 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 1386792..1386868 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 1386792..1386868 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 1386792..1386868 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 1386792..1386868 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 1386792..1386868 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1386792..1386868 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1386792..1386868 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 1386792..1386868 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| AYP36_RS06615 () | 1386863..1387204 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| AYP36_RS06620 () | 1387251..1388414 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| AYP36_RS06625 () | 1388462..1389343 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| AYP36_RS06630 () | 1389440..1389604 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| AYP36_RS06635 () | 1389781..1391193 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| AYP36_RS28905 () | 1391436..1391636 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| AYP36_RS06640 () | 1391641..1392393 | - | 753 | Protein_1264 | hypothetical protein | VF |
| AYP36_RS06650 () | 1392860..1394092 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| AYP36_RS06655 () | 1394133..1395404 | + | 1272 | WP_001037407.1 | DUF445 domain-containing protein | - |
| AYP36_RS06660 () | 1395520..1396671 | + | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| AYP36_RS06665 () | 1396681..1397448 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| AYP36_RS06670 () | 1397445..1397711 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| AYP36_RS06675 () | 1398023..1400200 | + | 2178 | WP_000535057.1 | hypothetical protein | VF |
| AYP36_RS06685 () | 1400466..1401308 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| AYP36_RS06690 () | 1401376..1402554 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |