MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91176 bp
Accession: NZ_CP034807 Location: 1..91176 Organism: Escherichia coli strain 2010C-3347 Replicon: plasmid p2010C-3347
Accession: NZ_CP034807 Location: 1..91176 Organism: Escherichia coli strain 2010C-3347 Replicon: plasmid p2010C-3347
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A1D75_RS28465 () | 4641..4865 | + | 225 | Protein_1 | IS3 family transposase IS3H | Transposase |
| A1D75_RS28470 () | 4933..5103 | - | 171 | Protein_2 | IS3 family transposase IS1203 | Transposase |
| A1D75_RS28475 () | 5110..5361 | - | 252 | Protein_3 | IS3 family transposase IS1203 | Transposase |
| A1D75_RS28480 () | 5418..6806 | + | 1389 | Protein_4 | Multifunctional conjugation protein TraI | Relaxase |
| A1D75_RS28485 () | 6826..7572 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| A1D75_RS28490 () | 7631..8491 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| A1D75_RS28495 () | 8594..9154 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| A1D75_RS28500 () | 9287..9499 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| A1D75_RS28505 () | 9744..10205 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| A1D75_RS28510 () | 10251..10460 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| A1D75_RS28515 () | 10498..10836 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| A1D75_RS28520 () | 11076..11330 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| A1D75_RS28530 () | 11566..11640 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| A1D75_RS28535 () | 11633..12490 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| A1D75_RS28550 () | 13403..13687 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| A1D75_RS28555 () | 13687..13962 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A1D75_RS28560 () | 14057..14263 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| A1D75_RS28565 () | 14363..14578 | - | 216 | Protein_18 | transposase | - |
| A1D75_RS28570 () | 14622..15188 | - | 567 | Protein_19 | IS3 family transposase ISSd1 | Transposase |
| A1D75_RS28575 () | 15188..15604 | - | 417 | Protein_20 | IS91 family transposase | - |
| A1D75_RS28580 () | 15604..15789 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| A1D75_RS28585 () | 15966..18176 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| A1D75_RS28590 () | 18220..18609 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| A1D75_RS28595 () | 18666..19654 | + | 989 | Protein_24 | IS3 family transposase IS629 | Transposase |
| A1D75_RS28605 () | 19835..23737 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| A1D75_RS28610 () | 23993..24474 | - | 482 | Protein_26 | IS1 family transposase IS1N | Transposase |
| A1D75_RS28620 () | 25917..26738 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| A1D75_RS28625 () | 26738..27844 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| A1D75_RS28630 () | 27934..29655 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| A1D75_RS28635 () | 29729..30727 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| A1D75_RS28640 () | 30780..30968 | + | 189 | Protein_31 | hypothetical protein | - |
| A1D75_RS28645 () | 31072..31158 | - | 87 | Protein_32 | IS3 family transposase ISEhe3 | Transposase |
| A1D75_RS28660 () | 31615..34311 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| A1D75_RS28665 () | 34398..35273 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| A1D75_RS28670 () | 35274..37241 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| A1D75_RS28675 () | 37241..38746 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| A1D75_RS28680 () | 38748..39971 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| A1D75_RS28685 () | 40002..40436 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| A1D75_RS28690 () | 40433..40987 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| A1D75_RS28695 () | 41002..41349 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| A1D75_RS28700 () | 41346..41945 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| A1D75_RS28705 () | 41942..42919 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| A1D75_RS28710 () | 42958..44130 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| A1D75_RS28715 () | 44117..44629 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| A1D75_RS28720 () | 44687..45520 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| A1D75_RS28725 () | 45612..46013 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| A1D75_RS28735 () | 46192..47363 | + | 1172 | Protein_47 | IS3 family transposase ISLad1 | Transposase |
| A1D75_RS28745 () | 47904..48419 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| A1D75_RS28750 () | 48421..51417 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| A1D75_RS28755 () | 51467..53587 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| A1D75_RS28760 () | 53591..55030 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| A1D75_RS29285 () | 55151..55643 | + | 493 | Protein_52 | Transcriptional repressor MprA | VF |
| A1D75_RS28780 () | 55774..56004 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| A1D75_RS28785 () | 56125..56865 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| A1D75_RS28790 () | 57150..58127 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| A1D75_RS28800 () | 58535..58735 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| A1D75_RS28805 () | 58732..59352 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| A1D75_RS28810 () | 59349..60032 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| A1D75_RS28815 () | 60491..60709 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| A1D75_RS28820 () | 60711..61016 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| A1D75_RS28835 () | 63076..64242 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| A1D75_RS28840 () | 64242..65213 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| A1D75_RS28865 () | 66513..68237 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| A1D75_RS28870 () | 68314..69216 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| A1D75_RS28875 () | 69220..69525 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| A1D75_RS28885 () | 69602..70285 | + | 684 | WP_000085945.1 | DNA methylase | - |
| A1D75_RS28890 () | 70286..70507 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| A1D75_RS28895 () | 70401..70955 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| A1D75_RS29290 () | 71001..71777 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| A1D75_RS28910 () | 72318..72620 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| A1D75_RS28915 () | 72667..73089 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| A1D75_RS28920 () | 73086..73277 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| A1D75_RS29295 () | 73247..73756 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| A1D75_RS28935 () | 74273..74503 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| A1D75_RS28940 () | 74555..75916 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| A1D75_RS28945 () | 75963..76526 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| A1D75_RS28950 () | 76612..77067 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| A1D75_RS29300 () | 77137..77343 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| A1D75_RS28960 () | 77369..77821 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| A1D75_RS28965 () | 77878..78111 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| A1D75_RS28970 () | 78177..80135 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| A1D75_RS28975 () | 80190..80624 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| A1D75_RS28980 () | 80621..81382 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 81351..81549 | + | 199 | NuclAT_0 | - | - |
| - () | 81351..81549 | + | 199 | NuclAT_0 | - | - |
| - () | 81351..81549 | + | 199 | NuclAT_0 | - | - |
| - () | 81351..81549 | + | 199 | NuclAT_0 | - | - |
| A1D75_RS28985 () | 81614..81772 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| A1D75_RS28990 () | 81906..83927 | + | 2022 | Protein_86 | hypothetical protein | Relaxase |
| A1D75_RS28995 () | 83995..84426 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| A1D75_RS29005 () | 85112..85461 | - | 350 | Protein_88 | IS3 family transposase IS3H | Transposase |
| A1D75_RS29010 () | 85555..85818 | + | 264 | Protein_89 | IS21 family transposase ISEc62 | Transposase |
| A1D75_RS29015 () | 85858..85978 | + | 121 | Protein_90 | IS21 family transposase ISEc62 | Transposase |
| A1D75_RS29020 () | 85975..86127 | + | 153 | Protein_91 | IS1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|